RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	TTI2	P47168	421 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	UBC9	P50623	157 aa	Predicted RBP	3.58	□□□□□ -1.84
PIM1	YBL022C	BRP1	P53194	125 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	RCE1	Q03530	315 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	INP1	Q03694	420 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	YDR391C	Q04170	232 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	YCR024C-B	Q3E7Z8	88 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	TRX3	P25372	127 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	MRPL11	P36521	249 aa	Predicted RBP	3.58	□□□□□ -1.84
PIM1	YBL022C	MGE1	P38523	228 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	YGL230C	P53074	147 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	YGR117C	P53270	476 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	DUG3	P53871	357 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	MTQ2	Q03920	221 aa	Predicted RBP	3.58	□□□□□ -1.84
PIM1	YBL022C	SPC19	Q03954	165 aa		3.58	□□□□□ -1.84
PIM1	YBL022C	CDC36	P06100	191 aa	Predicted RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	YPT53	P36019	220 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	RPF1	P38805	295 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	SSN3	P39073	555 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	PEX7	P39108	375 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	JHD1	P40034	492 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	BNA2	P47125	453 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	TRM9	P49957	279 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	PAU4	P53427	120 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YMR166C	Q03829	368 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	DAL4	Q04895	635 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	ATG39	Q06159	398 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	MCH1	Q07376	486 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	ENB1	Q08299	606 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	SAL1	D6W196	494 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	HVG1	P0CE11	249 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	OCH1	P31755	480 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	ARO4	P32449	370 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	HXT4	P32467	576 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	RPL14A	P36105	138 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	AUR1	P36107	401 aa	Predicted RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	MRPL16	P38064	232 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	RPL14B	P38754	138 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	YIL012W	P40551	113 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	GPI14	P47088	403 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	LCL3	P53153	274 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YDL211C	Q12121	372 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YCT1	Q12235	531 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	FRE7	Q12333	620 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YPR071W	Q12346	211 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	TOM1	Q03280	3268 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	VMA3	P25515	160 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	ZRT1	P32804	376 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	UPS2	P35200	230 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	PHD1	P36093	366 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	LDH1	P38139	375 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YPT35	P38815	214 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	SNU13	P39990	126 aa	Known RBP	3.57	□□□□□ -1.84
PIM1	YBL022C	YND1	P40009	630 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YER134C	P40081	178 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YPS6	P40583	537 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	LOA1	Q06508	300 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	ARR3	Q06598	404 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	YDL177C	Q12257	170 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	SRF1	Q12516	437 aa		3.57	□□□□□ -1.84
PIM1	YBL022C	QCR2	P07257	368 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	CIN2	P46670	268 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	POS5	Q06892	414 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	FSF1	Q12029	327 aa	Known RBP	3.56	□□□□□ -1.84
PIM1	YBL022C	RRG1	Q12167	365 aa	Predicted RBP	3.56	□□□□□ -1.84
PIM1	YBL022C	SLO1	Q3E784	85 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	MAK32	P23060	363 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	TKL2	P33315	681 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	YOX1	P34161	385 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	NTC20	P38302	140 aa	Predicted RBP	3.56	□□□□□ -1.84
PIM1	YBL022C	MNL1	P38888	796 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	GIM5	Q04493	163 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	MRX8	Q05473	314 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	YOR015W	Q12169	119 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	ODC2	Q99297	307 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	SRB5	P32585	307 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	ARC40	P38328	384 aa	Known RBP	3.56	□□□□□ -1.84
PIM1	YBL022C	THG1	P53215	237 aa	Known RBP	3.56	□□□□□ -1.84
PIM1	YBL022C	BOR1	P53838	576 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	YDL242W	Q07746	117 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	HUT1	Q12520	339 aa		3.56	□□□□□ -1.84
PIM1	YBL022C	YCR007C	P25354	239 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	MRP49	P32388	137 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	MKK2	P32491	506 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	MTC7	P32633	139 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	SOR1	P35497	357 aa	Known RBP	3.55	□□□□□ -1.84
PIM1	YBL022C	DRE2	P36152	348 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	PCL7	P40186	285 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	MIX17	Q03667	156 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	THI74	Q04083	370 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	SOR2	Q07786	357 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	YPL162C	Q12042	273 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	PAN3	P36102	679 aa	Predicted RBP	3.55	□□□□□ -1.84
PIM1	YBL022C	GEX2	P36173	615 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	ZTA1	P38230	334 aa	Known RBP	3.55	□□□□□ -1.84
PIM1	YBL022C	SNO4	Q04902	237 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	HSP32	Q08992	237 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	MCT1	Q12283	360 aa		3.55	□□□□□ -1.84
PIM1	YBL022C	NOP1	P15646	327 aa	Known RBP	3.54	□□□□□ -1.84
PIM1	YBL022C	MDH2	P22133	377 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms