RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YGL114WP53134 725 aa3.56□□□□□ -1.84
PTA1YAL043C HHO1P53551 258 aa3.56□□□□□ -1.84
PTA1YAL043C YIF1P53845 314 aaKnown RBP3.56□□□□□ -1.84
PTA1YAL043C YDC1Q02896 317 aa3.56□□□□□ -1.84
PTA1YAL043C YMR253CQ04835 414 aa3.56□□□□□ -1.84
PTA1YAL043C MRPL51Q06090 140 aaPredicted RBP3.56□□□□□ -1.84
PTA1YAL043C YDL086WQ07505 273 aa3.56□□□□□ -1.84
PTA1YAL043C SDO1Q07953 250 aaKnown RBP3.56□□□□□ -1.84
PTA1YAL043C ISA2Q12425 185 aa3.56□□□□□ -1.84
PTA1YAL043C PAA1Q12447 191 aaKnown RBP3.56□□□□□ -1.84
PTA1YAL043C YOR192C-CQ3E736 78 aa3.56□□□□□ -1.84
PTA1YAL043C YHR214C-EQ8TGK0 99 aa3.56□□□□□ -1.84
PTA1YAL043C SSS1P35179 80 aa3.56□□□□□ -1.84
PTA1YAL043C WSC4P38739 605 aa3.56□□□□□ -1.84
PTA1YAL043C YEA6P39953 335 aa3.56□□□□□ -1.84
PTA1YAL043C YIL169CP40442 995 aa3.56□□□□□ -1.84
PTA1YAL043C YIL024CP40543 189 aa3.56□□□□□ -1.84
PTA1YAL043C IKS1P47042 667 aa3.56□□□□□ -1.84
PTA1YAL043C HSV2P50079 448 aaPredicted RBP3.56□□□□□ -1.84
PTA1YAL043C SOL1P50278 321 aa3.56□□□□□ -1.84
PTA1YAL043C SKP1P52286 194 aa3.56□□□□□ -1.84
PTA1YAL043C GPI15P53961 229 aa3.56□□□□□ -1.84
PTA1YAL043C GTO3Q04806 366 aa3.56□□□□□ -1.84
PTA1YAL043C PML1Q07930 204 aaPredicted RBP3.56□□□□□ -1.84
PTA1YAL043C YOL118CQ08259 102 aa3.56□□□□□ -1.84
PTA1YAL043C NCE102Q12207 173 aaRIP-Chip data3.56□□□□□ -1.84not detected
PTA1YAL043C UBA3Q99344 299 aa3.56□□□□□ -1.84
PTA1YAL043C AIM17P23180 465 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C RNA15P25299 296 aaPredicted RBP3.55□□□□□ -1.84
PTA1YAL043C STP22P25604 385 aa3.55□□□□□ -1.84
PTA1YAL043C PRS2P38620 318 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C YER158CP40095 573 aa3.55□□□□□ -1.84
PTA1YAL043C GTT1P40582 234 aa3.55□□□□□ -1.84
PTA1YAL043C DAN1P47178 298 aa3.55□□□□□ -1.84
PTA1YAL043C NSA1P53136 463 aaPredicted RBP3.55□□□□□ -1.84
PTA1YAL043C MTM1P53320 366 aa3.55□□□□□ -1.84
PTA1YAL043C MRPL22P53881 309 aa3.55□□□□□ -1.84
PTA1YAL043C YPL039WQ03080 316 aa3.55□□□□□ -1.84
PTA1YAL043C DIC1Q06143 298 aa3.55□□□□□ -1.84
PTA1YAL043C YFH1Q07540 174 aa3.55□□□□□ -1.84
PTA1YAL043C RFU1Q08003 200 aa3.55□□□□□ -1.84
PTA1YAL043C GRE1Q08969 168 aa3.55□□□□□ -1.84
PTA1YAL043C DCN1Q12395 269 aa3.55□□□□□ -1.84
PTA1YAL043C YPR053CQ6Q5F3 151 aa3.55□□□□□ -1.84
PTA1YAL043C CSF1Q12150 2958 aa3.55□□□□□ -1.84
PTA1YAL043C FAS1P07149 2051 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C CYR1P08678 2026 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C CHO1P08456 276 aa3.55□□□□□ -1.84
PTA1YAL043C RPS16AP0CX51 143 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C RPS16BP0CX52 143 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C MDH2P22133 377 aa3.55□□□□□ -1.84
PTA1YAL043C CPR3P25719 182 aa3.55□□□□□ -1.84
PTA1YAL043C GLC7P32598 312 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C SHM2P37291 469 aaKnown RBP3.55□□□□□ -1.84
PTA1YAL043C YBR197CP38306 217 aa3.55□□□□□ -1.84
PTA1YAL043C PAC2P39937 518 aa3.55□□□□□ -1.84
PTA1YAL043C YCL001W-AP87012 153 aa3.55□□□□□ -1.84
PTA1YAL043C THI74Q04083 370 aa3.55□□□□□ -1.84
PTA1YAL043C SME1Q12330 94 aaPredicted RBP3.55□□□□□ -1.84
PTA1YAL043C FRE7Q12333 620 aa3.55□□□□□ -1.84
PTA1YAL043C ATG5Q12380 294 aa3.55□□□□□ -1.84
PTA1YAL043C COA2Q3E823 68 aa3.55□□□□□ -1.84
PTA1YAL043C TAD3Q9URQ3 322 aa3.55□□□□□ -1.84
PTA1YAL043C RPL35AP0CX84 120 aaKnown RBP3.54□□□□□ -1.84
PTA1YAL043C RPL35BP0CX85 120 aaKnown RBP3.54□□□□□ -1.84
PTA1YAL043C VMA3P25515 160 aa3.54□□□□□ -1.84
PTA1YAL043C CDC50P25656 391 aa3.54□□□□□ -1.84
PTA1YAL043C DAL3P32459 195 aa3.54□□□□□ -1.84
PTA1YAL043C UPS2P35200 230 aa3.54□□□□□ -1.84
PTA1YAL043C PTC7P38797 343 aa3.54□□□□□ -1.84
PTA1YAL043C SLZ1P40167 298 aa3.54□□□□□ -1.84
PTA1YAL043C EOS1P53938 366 aa3.54□□□□□ -1.84
PTA1YAL043C TPP1Q03796 238 aa3.54□□□□□ -1.84
PTA1YAL043C YDR114CQ04597 100 aa3.54□□□□□ -1.84
PTA1YAL043C RPP2AP05319 106 aaKnown RBP3.54□□□□□ -1.84
PTA1YAL043C ATG15P25641 520 aa3.54□□□□□ -1.84
PTA1YAL043C LAC1P28496 418 aa3.54□□□□□ -1.84
PTA1YAL043C AFG1P32317 509 aa3.54□□□□□ -1.84
PTA1YAL043C SPC29P33419 253 aa3.54□□□□□ -1.84
PTA1YAL043C SWD2P36104 329 aaPredicted RBP3.54□□□□□ -1.84
PTA1YAL043C GPI16P38875 610 aa3.54□□□□□ -1.84
PTA1YAL043C YIL086CP40503 102 aa3.54□□□□□ -1.84
PTA1YAL043C REE1P40893 198 aa3.54□□□□□ -1.84
PTA1YAL043C GNA1P43577 159 aaPredicted RBP3.54□□□□□ -1.84
PTA1YAL043C CTK2P46962 323 aa3.54□□□□□ -1.84
PTA1YAL043C YJR012CP47087 207 aa3.54□□□□□ -1.84
PTA1YAL043C XPT1P47165 209 aa3.54□□□□□ -1.84
PTA1YAL043C TIM21P53220 239 aa3.54□□□□□ -1.84
PTA1YAL043C YNR040WP53736 256 aa3.54□□□□□ -1.84
PTA1YAL043C HRI1Q05905 244 aaKnown RBP3.54□□□□□ -1.84
PTA1YAL043C SWT1Q12104 458 aa3.54□□□□□ -1.84
PTA1YAL043C USV1Q12132 391 aa3.54□□□□□ -1.84
PTA1YAL043C YCT1Q12235 531 aa3.54□□□□□ -1.84
PTA1YAL043C AIM45Q12480 344 aaKnown RBP3.54□□□□□ -1.84
PTA1YAL043C Q0144Q9ZZW2 109 aa3.54□□□□□ -1.84
PTA1YAL043C CKA1P15790 372 aa3.53□□□□□ -1.84
PTA1YAL043C FAA1P30624 700 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C SHB17P36136 271 aaKnown RBP3.53□□□□□ -1.84
PTA1YAL043C SDH4P37298 181 aa3.53□□□□□ -1.84
PTA1YAL043C HIT1P46973 164 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms