RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	VAC17	P25591	423 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	YCR102C	P25608	368 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	YBR096W	P38256	230 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	YHR035W	P38769	630 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	NDT80	P38830	627 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	GWT1	P47026	490 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-JR2	P47099	440 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	GCV1	P48015	400 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	BUL1	P48524	976 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	YGR151C	P53287	111 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	YMR099C	Q03161	297 aa	Known RBP	4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-DR1	Q03856	440 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-ML1	Q04706	440 aa	Known RBP	4.37	□□□□□ -1.71
PXA1	YPL147W	FDH1	Q08911	376 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-GR1	Q12085	440 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	ERV2	Q12284	196 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	ORT1	Q12375	292 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-DR3	Q12441	440 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-NL2	Q12470	440 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-GR2	Q12485	440 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	YPR014C	Q6B0W2	109 aa		4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.37	□□□□□ -1.71
PXA1	YPL147W	TY1A-OL	Q92392	440 aa	Known RBP	4.37	□□□□□ -1.71
PXA1	YPL147W	GAS1	P22146	559 aa	Known RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	OST2	P46964	130 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	RHO4	Q00246	291 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	COF1	Q03048	143 aa	Known RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	YMR178W	Q03219	274 aa	Known RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	SEC13	Q04491	297 aa	Known RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	COQ9	Q05779	260 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	TAZ1	Q06510	381 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	RAD28	Q12021	506 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	ISD11	Q6Q560	94 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	RPS18A	P0CX55	146 aa	Known RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	RPS18B	P0CX56	146 aa	Predicted RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	TY1A-OR	P0CX59	440 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	TY1A-PR2	P0CX60	440 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	HYP2	P23301	157 aa	Known RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	NUD1	P32336	851 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	GMH1	P36125	273 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	SPL2	P38839	148 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	YEL075C	P39972	122 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	BUD13	P46947	266 aa	Predicted RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	IRC18	P47056	224 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	YNL095C	P53932	642 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	KTR5	P53966	522 aa	Predicted RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	YDR366C	P87287	132 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	SDC1	Q03323	175 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	YMR087W	Q04299	284 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	YOL024W	Q08172	172 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	THI21	Q08975	551 aa		4.36	□□□□□ -1.71
PXA1	YPL147W	MRH1	Q12117	320 aa	Predicted RBP	4.36	□□□□□ -1.71
PXA1	YPL147W	SLM5	P25345	492 aa	Known RBP	4.35	□□□□□ -1.71
PXA1	YPL147W	YNK1	P36010	153 aa	Known RBP	4.35	□□□□□ -1.71
PXA1	YPL147W	YGP1	P38616	354 aa	Known RBP	4.35	□□□□□ -1.71
PXA1	YPL147W	PHM8	P40025	321 aa		4.35	□□□□□ -1.71
PXA1	YPL147W	EMG1	Q06287	252 aa	Known RBP	4.35	□□□□□ -1.71
PXA1	YPL147W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
PXA1	YPL147W	CDC6	P09119	513 aa		4.35	□□□□□ -1.71
PXA1	YPL147W	SAT4	P25333	603 aa	Known RBP	4.35	□□□□□ -1.71
PXA1	YPL147W	ELO2	P25358	347 aa		4.35	□□□□□ -1.71
PXA1	YPL147W	TSA2	Q04120	196 aa		4.35	□□□□□ -1.71
PXA1	YPL147W	RPC11	Q04307	110 aa	Predicted RBP	4.35	□□□□□ -1.71
PXA1	YPL147W	LIP2	Q06005	328 aa		4.35	□□□□□ -1.71
PXA1	YPL147W	MES1	P00958	751 aa	Known RBP	4.34	□□□□□ -1.71
PXA1	YPL147W	RPL11A	P0C0W9	174 aa	Known RBP	4.34	□□□□□ -1.71
PXA1	YPL147W	ATS1	P31386	333 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	HIS7	P33734	552 aa	Known RBP	4.34	□□□□□ -1.71
PXA1	YPL147W	TIR2	P33890	251 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	YBR144C	P34215	104 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	YBR056W	P38081	501 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	INM1	P38710	295 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	RPL14B	P38754	138 aa	Known RBP	4.34	□□□□□ -1.71
PXA1	YPL147W	YHR177W	P38867	453 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	SWM2	P40342	146 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	YIL152W	P40455	235 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	MCM22	P47167	239 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	TFC7	Q12415	435 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	PRM4	Q12498	284 aa		4.34	□□□□□ -1.71
PXA1	YPL147W	RPL11B	Q3E757	174 aa	Predicted RBP	4.34	□□□□□ -1.71
PXA1	YPL147W	DET1	Q99288	334 aa	Known RBP	4.34	□□□□□ -1.71
PXA1	YPL147W	RPL40A	P0CH08	128 aa	Known RBP	4.34	□□□□□ -1.72
PXA1	YPL147W	RPL40B	P0CH09	128 aa	Known RBP	4.34	□□□□□ -1.72
PXA1	YPL147W	MBR1	P23493	339 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	STP22	P25604	385 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	YKR041W	P36134	250 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	ECM33	P38248	429 aa	Known RBP	4.34	□□□□□ -1.72
PXA1	YPL147W	YHL026C	P38740	315 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	SBH1	P52870	82 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	MDM34	P53083	459 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	YGR015C	P53208	328 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	YNL092W	P53934	400 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	TY1A-DR2	Q03964	440 aa	Known RBP	4.34	□□□□□ -1.72
PXA1	YPL147W	YMR317W	Q04893	1140 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	POS5	Q06892	414 aa		4.34	□□□□□ -1.72
PXA1	YPL147W	RAD6	P06104	172 aa		4.33	□□□□□ -1.72
PXA1	YPL147W	UBC5	P15732	148 aa		4.33	□□□□□ -1.72
PXA1	YPL147W	PRE2	P30656	287 aa	Known RBP	4.33	□□□□□ -1.72
PXA1	YPL147W	MET22	P32179	357 aa		4.33	□□□□□ -1.72
PXA1	YPL147W	MRPL6	P32904	214 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms