RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C PRM8P53174 237 aa2.86□□□□□ -1.95
RPA43YOR340C YNR062CP53748 327 aa2.86□□□□□ -1.95
RPA43YOR340C YMR099CQ03161 297 aaKnown RBP2.86□□□□□ -1.95
RPA43YOR340C YDR249CQ03787 373 aa2.86□□□□□ -1.95
RPA43YOR340C ATG38Q05789 226 aaKnown RBP2.86□□□□□ -1.95
RPA43YOR340C YDL114WQ07530 308 aa2.86□□□□□ -1.95
RPA43YOR340C IRC25Q07951 179 aa2.86□□□□□ -1.95
RPA43YOR340C HRT1Q08273 121 aa2.86□□□□□ -1.95
RPA43YOR340C YDL109CQ12103 647 aa2.86□□□□□ -1.95
RPA43YOR340C SPC3Q12133 184 aa2.86□□□□□ -1.95
RPA43YOR340C YOR214CQ12282 236 aa2.86□□□□□ -1.95
RPA43YOR340C APC2Q12440 853 aa2.86□□□□□ -1.95
RPA43YOR340C YOR343CQ12484 108 aa2.86□□□□□ -1.95
RPA43YOR340C FOL3Q12676 427 aaPredicted RBP2.86□□□□□ -1.95
RPA43YOR340C YAL064W-BO13512 126 aa2.85□□□□□ -1.95
RPA43YOR340C RHO1P06780 209 aaKnown RBP2.85□□□□□ -1.95
RPA43YOR340C CBP6P07253 162 aaPredicted RBP2.85□□□□□ -1.95
RPA43YOR340C SPS100P13130 326 aa2.85□□□□□ -1.95
RPA43YOR340C TFS1P14306 219 aa2.85□□□□□ -1.95
RPA43YOR340C RPL16AP26784 199 aaKnown RBP2.85□□□□□ -1.95
RPA43YOR340C MRPL6P32904 214 aa2.85□□□□□ -1.95
RPA43YOR340C RIB7P33312 244 aa2.85□□□□□ -1.95
RPA43YOR340C KRE29P40026 464 aa2.85□□□□□ -1.95
RPA43YOR340C SPO73P40031 143 aa2.85□□□□□ -1.95
RPA43YOR340C YCH1P42937 148 aa2.85□□□□□ -1.95
RPA43YOR340C YFL051CP43552 160 aa2.85□□□□□ -1.95
RPA43YOR340C YFR057WP43625 151 aa2.85□□□□□ -1.95
RPA43YOR340C CIN2P46670 268 aa2.85□□□□□ -1.95
RPA43YOR340C BAT2P47176 376 aaKnown RBP2.85□□□□□ -1.95
RPA43YOR340C BRR6P53062 197 aa2.85□□□□□ -1.95
RPA43YOR340C YGR168CP53293 376 aa2.85□□□□□ -1.95
RPA43YOR340C MPP6P53725 186 aaPredicted RBP2.85□□□□□ -1.95
RPA43YOR340C YPL039WQ03080 316 aa2.85□□□□□ -1.95
RPA43YOR340C SCS7Q03529 384 aa2.85□□□□□ -1.95
RPA43YOR340C SEC13Q04491 297 aaKnown RBP2.85□□□□□ -1.95
RPA43YOR340C RRG8Q06109 277 aa2.85□□□□□ -1.95
RPA43YOR340C GRE1Q08969 168 aa2.85□□□□□ -1.95
RPA43YOR340C IZH2Q12442 317 aa2.85□□□□□ -1.95
RPA43YOR340C YPL119C-AQ3E751 87 aa2.85□□□□□ -1.95
RPA43YOR340C UBA3Q99344 299 aa2.85□□□□□ -1.95
RPA43YOR340C PCL1P24867 279 aa2.84□□□□□ -1.95
RPA43YOR340C PPA2P28239 310 aa2.84□□□□□ -1.95
RPA43YOR340C JEN1P36035 616 aa2.84□□□□□ -1.95
RPA43YOR340C YBR063CP38083 404 aa2.84□□□□□ -1.95
RPA43YOR340C SDS24P38314 527 aa2.84□□□□□ -1.95
RPA43YOR340C FET3P38993 636 aa2.84□□□□□ -1.95
RPA43YOR340C STB1P42845 420 aa2.84□□□□□ -1.95
RPA43YOR340C FMP33P46998 180 aa2.84□□□□□ -1.95
RPA43YOR340C ADO1P47143 340 aaKnown RBP2.84□□□□□ -1.95
RPA43YOR340C BNS1P50084 137 aa2.84□□□□□ -1.95
RPA43YOR340C PNC1P53184 216 aaKnown RBP2.84□□□□□ -1.95
RPA43YOR340C VOA1P53262 265 aa2.84□□□□□ -1.95
RPA43YOR340C PXR1P53335 271 aaPredicted RBP2.84□□□□□ -1.95
RPA43YOR340C RVB1Q03940 463 aaKnown RBP2.84□□□□□ -1.95
RPA43YOR340C ECM18Q04623 453 aa2.84□□□□□ -1.95
RPA43YOR340C YMR226CQ05016 267 aaKnown RBP2.84□□□□□ -1.95
RPA43YOR340C YPR127WQ06494 345 aa2.84□□□□□ -1.95
RPA43YOR340C YPR147CQ06522 304 aaKnown RBP2.84□□□□□ -1.95
RPA43YOR340C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
RPA43YOR340C COQ10Q08058 207 aa2.84□□□□□ -1.95
RPA43YOR340C JID1Q12350 301 aa2.84□□□□□ -1.95
RPA43YOR340C HMS1Q12398 434 aa2.84□□□□□ -1.95
RPA43YOR340C MRPL23Q12487 163 aaPredicted RBP2.84□□□□□ -1.95
RPA43YOR340C YIL002W-AQ3E7Z5 69 aa2.84□□□□□ -1.95
RPA43YOR340C HEM4P06174 275 aa2.83□□□□□ -1.96
RPA43YOR340C SNF6P18888 332 aa2.83□□□□□ -1.96
RPA43YOR340C MDH3P32419 343 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
RPA43YOR340C YKL162CP36052 402 aa2.83□□□□□ -1.96
RPA43YOR340C YKL071WP36086 256 aa2.83□□□□□ -1.96
RPA43YOR340C ANR2P36090 516 aaPredicted RBP2.83□□□□□ -1.96
RPA43YOR340C YKR015CP36111 568 aa2.83□□□□□ -1.96
RPA43YOR340C YHL037CP38733 133 aa2.83□□□□□ -1.96
RPA43YOR340C SEN34P39707 275 aa2.83□□□□□ -1.96
RPA43YOR340C YRB2P40517 327 aa2.83□□□□□ -1.96
RPA43YOR340C ATG18P43601 500 aa2.83□□□□□ -1.96
RPA43YOR340C CRH1P53301 507 aa2.83□□□□□ -1.96
RPA43YOR340C GRX5Q02784 150 aa2.83□□□□□ -1.96
RPA43YOR340C DML1Q03652 475 aa2.83□□□□□ -1.96
RPA43YOR340C YDR102CQ03864 110 aa2.83□□□□□ -1.96
RPA43YOR340C ELP6Q04868 273 aa2.83□□□□□ -1.96
RPA43YOR340C IRC19Q07843 230 aa2.83□□□□□ -1.96
RPA43YOR340C PAA1Q12447 191 aaKnown RBP2.83□□□□□ -1.96
RPA43YOR340C YPR1Q12458 312 aa2.83□□□□□ -1.96
RPA43YOR340C DCP1Q12517 231 aaPredicted RBP2.83□□□□□ -1.96
RPA43YOR340C YHR214C-EQ8TGK0 99 aa2.83□□□□□ -1.96
RPA43YOR340C ADH2P00331 348 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C RPL23AP0CX41 137 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C RPL23BP0CX42 137 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C RPS18AP0CX55 146 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C RPS18BP0CX56 146 aaPredicted RBP2.82□□□□□ -1.96
RPA43YOR340C DPM1P14020 267 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C SAR1P20606 190 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C VMA5P31412 392 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C MSN4P33749 630 aa2.82□□□□□ -1.96
RPA43YOR340C GPX1P36014 167 aa2.82□□□□□ -1.96
RPA43YOR340C SWD3P38123 315 aa2.82□□□□□ -1.96
RPA43YOR340C YGP1P38616 354 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C AIM10P39965 576 aaKnown RBP2.82□□□□□ -1.96
RPA43YOR340C RRG9P40156 214 aa2.82□□□□□ -1.96
RPA43YOR340C CDC40P40968 455 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms