RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	YNL010W	P53981	241 aa	Known RBP	4.62	□□□□□ -1.67
NUP1	YOR098C	UTP15	Q04305	513 aa	Known RBP	4.62	□□□□□ -1.67
NUP1	YOR098C	YMR315W	Q04869	349 aa	Known RBP	4.62	□□□□□ -1.67
NUP1	YOR098C	RTR2	Q12378	196 aa		4.62	□□□□□ -1.67
NUP1	YOR098C	URA10	P30402	227 aa		4.62	□□□□□ -1.67
NUP1	YOR098C	ARO7	P32178	256 aa		4.62	□□□□□ -1.67
NUP1	YOR098C	YHR127W	P38833	243 aa	Known RBP	4.62	□□□□□ -1.67
NUP1	YOR098C	EDC3	P39998	551 aa	Known RBP	4.62	□□□□□ -1.67
NUP1	YOR098C	PIR3	Q03180	325 aa		4.62	□□□□□ -1.67
NUP1	YOR098C	TFC7	Q12415	435 aa		4.62	□□□□□ -1.67
NUP1	YOR098C	ECM31	P38122	312 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	YOR283W	Q12040	230 aa	Known RBP	4.61	□□□□□ -1.67
NUP1	YOR098C	PCL9	Q12477	304 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	KTI12	P34253	313 aa	Known RBP	4.61	□□□□□ -1.67
NUP1	YOR098C	IPI1	P38803	334 aa	Predicted RBP	4.61	□□□□□ -1.67
NUP1	YOR098C	PEX22	P39718	180 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	EAF6	P47128	113 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	MCM22	P47167	239 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	ARO8	P53090	500 aa	Known RBP	4.61	□□□□□ -1.67
NUP1	YOR098C	ATP23	P53722	227 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	ABF2	Q02486	183 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	YMR279C	Q03263	540 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	SEI1	Q06058	285 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	MRX4	Q12467	430 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	UBR2	Q07963	1872 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	HKR1	P41809	1802 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	YAL064W-B	O13512	126 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	RNP1	P32385	249 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	MRPL28	P36527	147 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	PHB1	P40961	287 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	RPS12	P48589	143 aa	Known RBP	4.61	□□□□□ -1.67
NUP1	YOR098C	RFM1	Q12192	310 aa		4.61	□□□□□ -1.67
NUP1	YOR098C	PET54	P10834	293 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	ALK2	P32789	676 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP1	YOR098C	LCB3	P47013	409 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	MDV1	P47025	714 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	IMP4	P53941	290 aa	Known RBP	4.6	□□□□□ -1.67
NUP1	YOR098C	MAK3	Q03503	176 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	TDA1	Q03533	586 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	YPR127W	Q06494	345 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	MET2	P08465	486 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	CAT2	P32796	670 aa	Known RBP	4.6	□□□□□ -1.67
NUP1	YOR098C	ARC40	P38328	384 aa	Known RBP	4.6	□□□□□ -1.67
NUP1	YOR098C	RCK1	P38622	512 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	MDM31	P38880	579 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	FIS1	P40515	155 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	TIR3	P40552	269 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	IKS1	P47042	667 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	FMP48	P53233	369 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	TPC1	P53257	314 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	CLD1	P53264	445 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	TRM12	Q04235	462 aa		4.6	□□□□□ -1.67
NUP1	YOR098C	MOT1	P32333	1867 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	GSC2	P40989	1895 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	COX5A	P00424	153 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	HEM4	P06174	275 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	ATG22	P25568	528 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	NAT2	P37293	288 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	OST1	P41543	476 aa	Known RBP	4.59	□□□□□ -1.67
NUP1	YOR098C	FCY22	Q12119	530 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	DSF1	P0CX08	502 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	YNR073C	P0CX09	502 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	CDC43	P18898	376 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	HOT13	P36078	116 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	COX14	P39103	70 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	AZF1	P41696	914 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	SER2	P42941	309 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	GPI11	Q06636	219 aa		4.59	□□□□□ -1.67
NUP1	YOR098C	YKR104W	P0CE69	306 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	RPL42A	P0CX27	106 aa	Known RBP	4.59	□□□□□ -1.68
NUP1	YOR098C	RPL42B	P0CX28	106 aa	Known RBP	4.59	□□□□□ -1.68
NUP1	YOR098C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.68	not detected
NUP1	YOR098C	SPT14	P32363	452 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	ECM33	P38248	429 aa	Known RBP	4.59	□□□□□ -1.68
NUP1	YOR098C	RRP3	P38712	501 aa	Known RBP	4.59	□□□□□ -1.68
NUP1	YOR098C	ARN2	P38724	620 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	YML018C	Q03730	393 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	SPG4	Q04438	115 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	MDM32	Q12171	622 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	ATP14	Q12349	124 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	YPL247C	Q12523	523 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	CSR2	Q12734	1121 aa		4.59	□□□□□ -1.68
NUP1	YOR098C	MRPL20	P22354	195 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP1	YOR098C	TAH1	P25638	111 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP1	YOR098C	OMA1	P36163	345 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	IPT1	P38954	527 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	COS4	P43542	379 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	IPP1	P00817	287 aa	Known RBP	4.58	□□□□□ -1.68
NUP1	YOR098C	PIS1	P06197	220 aa	Known RBP	4.58	□□□□□ -1.68
NUP1	YOR098C	ATG15	P25641	520 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	SDH3	P33421	198 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	HEM14	P40012	539 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	LSM3	P57743	89 aa	Known RBP	4.58	□□□□□ -1.68
NUP1	YOR098C	TPS1	Q00764	495 aa	Known RBP	4.58	□□□□□ -1.68
NUP1	YOR098C	SLD7	Q08457	257 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	YPL229W	Q99395	206 aa		4.58	□□□□□ -1.68
NUP1	YOR098C	CDC28	P00546	298 aa	Known RBP	4.57	□□□□□ -1.68
NUP1	YOR098C	OAC1	P32332	324 aa		4.57	□□□□□ -1.68
NUP1	YOR098C	ZRT3	P34240	503 aa		4.57	□□□□□ -1.68
NUP1	YOR098C	MRH4	P53166	561 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms