RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE5	YOR042W	SYS1	P41544	203 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	CAT5	P41735	233 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	YFL015C	P43578	164 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	GPI14	P47088	403 aa	Known RBP	4.19	□□□□□ -1.74
CUE5	YOR042W	BXI1	P48558	297 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	AVT4	P50944	713 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	UBC13	P52490	153 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	ARO8	P53090	500 aa	Known RBP	4.19	□□□□□ -1.74
CUE5	YOR042W	TPN1	P53099	579 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	NSA1	P53136	463 aa	Predicted RBP	4.19	□□□□□ -1.74
CUE5	YOR042W	FMP48	P53233	369 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	LSM7	P53905	115 aa	Known RBP	4.19	□□□□□ -1.74
CUE5	YOR042W	KEI1	Q06346	221 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	SRL2	Q12020	392 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	NCE102	Q12207	173 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
CUE5	YOR042W	BPH1	P25356	2167 aa		4.19	□□□□□ -1.74
CUE5	YOR042W	RPS23A	P0CX29	145 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	RPS23B	P0CX30	145 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	SPS100	P13130	326 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	ARO4	P32449	370 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	HYM1	P32464	399 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	REC114	P32841	428 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	MRPL36	P36531	177 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	TCM62	P38228	572 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	UMP1	P38293	148 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	LNP1	P38878	278 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	YND1	P40009	630 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	AIM20	P40451	204 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	YKE4	P40544	346 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	YGR042W	P53227	271 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	CRZ1	P53968	678 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	MOT3	P54785	490 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	YKR005C	Q02203	525 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	YPL077C	Q02831	240 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	HNT1	Q04344	158 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	PHO92	Q06390	306 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	MRX9	Q07349	420 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	RRS1	Q08746	203 aa	Known RBP	4.18	□□□□□ -1.74
CUE5	YOR042W	HUT1	Q12520	339 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	ODC2	Q99297	307 aa		4.18	□□□□□ -1.74
CUE5	YOR042W	PET54	P10834	293 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	MSI1	P13712	422 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	SAG1	P20840	650 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	YBL010C	P32788	280 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	MTR2	P34232	184 aa	Known RBP	4.17	□□□□□ -1.74
CUE5	YOR042W	PRS3	P38689	320 aa	Known RBP	4.17	□□□□□ -1.74
CUE5	YOR042W	ARO9	P38840	513 aa	Predicted RBP	4.17	□□□□□ -1.74
CUE5	YOR042W	YIL060W	P40519	144 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	YIL029C	P40538	142 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	OTU1	P43558	301 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
CUE5	YOR042W	YDC1	Q02896	317 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	YMR279C	Q03263	540 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	UTP15	Q04305	513 aa	Known RBP	4.17	□□□□□ -1.74
CUE5	YOR042W	YPR098C	Q06089	161 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	GAT3	Q07928	141 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	ERP4	Q12450	207 aa		4.17	□□□□□ -1.74
CUE5	YOR042W	CDC28	P00546	298 aa	Known RBP	4.16	□□□□□ -1.74
CUE5	YOR042W	RPL3	P14126	387 aa	Known RBP	4.16	□□□□□ -1.74
CUE5	YOR042W	URA6	P15700	204 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	YCR061W	P25639	631 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	RFA3	P26755	122 aa	Known RBP	4.16	□□□□□ -1.74
CUE5	YOR042W	PEX4	P29340	183 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	VMA5	P31412	392 aa	Known RBP	4.16	□□□□□ -1.74
CUE5	YOR042W	RNP1	P32385	249 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	RIB7	P33312	244 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	SEC66	P33754	206 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	YKL063C	P35725	167 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	YER079W	P40052	210 aa	Known RBP	4.16	□□□□□ -1.74
CUE5	YOR042W	EGT2	P42835	1041 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	TAX4	P47030	604 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	AIM25	P47140	327 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	SSN8	P47821	323 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	SED1	Q01589	338 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	SKO1	Q02100	647 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	YLR031W	Q07978	186 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	HTZ1	Q12692	134 aa	Known RBP	4.16	□□□□□ -1.74
CUE5	YOR042W	YER175W-A	Q8TGU4	54 aa		4.16	□□□□□ -1.74
CUE5	YOR042W	TDH2	P00358	332 aa	Known RBP	4.15	□□□□□ -1.75
CUE5	YOR042W	REP2	P03872	296 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	RPL6B	P05739	176 aa	Known RBP	4.15	□□□□□ -1.75
CUE5	YOR042W	CDC23	P16522	626 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	DAL80	P26343	269 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	YBR242W	P38331	238 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	GNA1	P43577	159 aa	Predicted RBP	4.15	□□□□□ -1.75
CUE5	YOR042W	UFD1	P53044	361 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	YDR248C	Q03786	193 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	YTH1	Q06102	208 aa	Predicted RBP	4.15	□□□□□ -1.75
CUE5	YOR042W	PIN3	Q06449	215 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	YOR186W	Q08560	144 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	YNL162W-A	Q3E7A8	72 aa		4.15	□□□□□ -1.75
CUE5	YOR042W	SPS2	P08459	502 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	SPS4	P09937	338 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	AQY1	P0CD91	305 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	PET122	P10355	254 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	YCP4	P25349	247 aa	Known RBP	4.14	□□□□□ -1.75
CUE5	YOR042W	ERG3	P32353	365 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	AGA2	P32781	87 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	FMT1	P32785	401 aa		4.14	□□□□□ -1.75
CUE5	YOR042W	VAM7	P32912	316 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms