RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W MRPL13Q02204 264 aa3.89□□□□□ -1.79
RCL1YOL010W CWC27Q02770 301 aa3.89□□□□□ -1.79
RCL1YOL010W YDR239CQ03780 787 aa3.89□□□□□ -1.79
RCL1YOL010W RUB1Q03919 77 aa3.89□□□□□ -1.79
RCL1YOL010W YMR226CQ05016 267 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W IPK1Q06667 281 aa3.89□□□□□ -1.79
RCL1YOL010W LYS21Q12122 440 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W SPC3Q12133 184 aa3.89□□□□□ -1.79
RCL1YOL010W IZH2Q12442 317 aa3.89□□□□□ -1.79
RCL1YOL010W RPL39P04650 51 aa3.88□□□□□ -1.79
RCL1YOL010W RPL6BP05739 176 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W MATALPHA1P0CY06 175 aa3.88□□□□□ -1.79
RCL1YOL010W HMLALPHA1P0CY07 175 aa3.88□□□□□ -1.79
RCL1YOL010W ARO3P14843 370 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W PDB1P32473 366 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W PAD1P33751 242 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
RCL1YOL010W YKL070WP36087 169 aa3.88□□□□□ -1.79
RCL1YOL010W IMD2P38697 523 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W PHO90P39535 881 aa3.88□□□□□ -1.79
RCL1YOL010W GVP36P40531 326 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W IRC5P43610 853 aa3.88□□□□□ -1.79
RCL1YOL010W LSM8P47093 109 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W PNC1P53184 216 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W YDR102CQ03864 110 aa3.88□□□□□ -1.79
RCL1YOL010W RGC1Q06108 1083 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W GPN3Q06543 272 aa3.88□□□□□ -1.79
RCL1YOL010W MHR1Q06630 226 aa3.88□□□□□ -1.79
RCL1YOL010W GEP3Q08622 556 aa3.88□□□□□ -1.79
RCL1YOL010W USB1Q12208 290 aaKnown RBP3.88□□□□□ -1.79
RCL1YOL010W FYV7Q12247 151 aa3.88□□□□□ -1.79
RCL1YOL010W RRI1Q12468 440 aa3.88□□□□□ -1.79
RCL1YOL010W YGL041W-AP0C5N3 154 aa3.87□□□□□ -1.79
RCL1YOL010W NFT1P0CE68 1218 aa3.87□□□□□ -1.79
RCL1YOL010W NAM2P11325 894 aa3.87□□□□□ -1.79
RCL1YOL010W MRPL6P32904 214 aa3.87□□□□□ -1.79
RCL1YOL010W TCM62P38228 572 aaKnown RBP3.87□□□□□ -1.79
RCL1YOL010W SPO73P40031 143 aa3.87□□□□□ -1.79
RCL1YOL010W HXT14P42833 540 aa3.87□□□□□ -1.79
RCL1YOL010W BNA2P47125 453 aa3.87□□□□□ -1.79
RCL1YOL010W YIP5P53108 310 aa3.87□□□□□ -1.79
RCL1YOL010W PRM8P53174 237 aa3.87□□□□□ -1.79
RCL1YOL010W NQM1P53228 333 aaPredicted RBP3.87□□□□□ -1.79
RCL1YOL010W DIG2Q03373 323 aaKnown RBP3.87□□□□□ -1.79
RCL1YOL010W IRC25Q07951 179 aa3.87□□□□□ -1.79
RCL1YOL010W SWT1Q12104 458 aa3.87□□□□□ -1.79
RCL1YOL010W AGC1Q12482 902 aa3.87□□□□□ -1.79
RCL1YOL010W RIB3Q99258 208 aa3.87□□□□□ -1.79
RCL1YOL010W VPS63O13549 108 aa3.86□□□□□ -1.79
RCL1YOL010W RPL24AP04449 155 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W RAD52P06778 471 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W NHP6BP11633 99 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W FRS1P15624 595 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W CPR2P23285 205 aa3.86□□□□□ -1.79
RCL1YOL010W CNB1P25296 175 aa3.86□□□□□ -1.79
RCL1YOL010W PRP21P32524 280 aaPredicted RBP3.86□□□□□ -1.79
RCL1YOL010W MSS1P32559 526 aaPredicted RBP3.86□□□□□ -1.79
RCL1YOL010W SIP1P32578 815 aa3.86□□□□□ -1.79
RCL1YOL010W GLC7P32598 312 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W GPI18P38211 433 aa3.86□□□□□ -1.79
RCL1YOL010W FAT1P38225 669 aa3.86□□□□□ -1.79
RCL1YOL010W ARO9P38840 513 aaPredicted RBP3.86□□□□□ -1.79
RCL1YOL010W CHL4P38907 458 aa3.86□□□□□ -1.79
RCL1YOL010W PDS1P40316 373 aaPredicted RBP3.86□□□□□ -1.79
RCL1YOL010W PFS2P42841 465 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W SFH5P47008 294 aa3.86□□□□□ -1.79
RCL1YOL010W PKP2P53170 491 aa3.86□□□□□ -1.79
RCL1YOL010W GPI17Q04080 534 aa3.86□□□□□ -1.79
RCL1YOL010W MRPL51Q06090 140 aaPredicted RBP3.86□□□□□ -1.79
RCL1YOL010W SYC1Q08553 188 aaPredicted RBP3.86□□□□□ -1.79
RCL1YOL010W MCT1Q12283 360 aa3.86□□□□□ -1.79
RCL1YOL010W YLR126CQ12288 251 aa3.86□□□□□ -1.79
RCL1YOL010W PAA1Q12447 191 aaKnown RBP3.86□□□□□ -1.79
RCL1YOL010W PMR1P13586 950 aa3.85□□□□□ -1.79
RCL1YOL010W GCN3P14741 305 aa3.85□□□□□ -1.79
RCL1YOL010W PHO80P20052 293 aa3.85□□□□□ -1.79
RCL1YOL010W PPA2P28239 310 aa3.85□□□□□ -1.79
RCL1YOL010W UBC8P28263 218 aa3.85□□□□□ -1.79
RCL1YOL010W ANR2P36090 516 aaPredicted RBP3.85□□□□□ -1.79
RCL1YOL010W YHR035WP38769 630 aa3.85□□□□□ -1.79
RCL1YOL010W BUR6P40096 142 aa3.85□□□□□ -1.79
RCL1YOL010W PMT6P42934 759 aa3.85□□□□□ -1.79
RCL1YOL010W HIT1P46973 164 aa3.85□□□□□ -1.79
RCL1YOL010W COS10P52924 374 aa3.85□□□□□ -1.79
RCL1YOL010W RMD9P53140 646 aaKnown RBP3.85□□□□□ -1.79
RCL1YOL010W GEP7P53171 287 aa3.85□□□□□ -1.79
RCL1YOL010W BUD17P53727 317 aa3.85□□□□□ -1.79
RCL1YOL010W YPL080CQ02826 108 aa3.85□□□□□ -1.79
RCL1YOL010W YMR315WQ04869 349 aaKnown RBP3.85□□□□□ -1.79
RCL1YOL010W GSH2Q08220 491 aa3.85□□□□□ -1.79
RCL1YOL010W MCH4Q08268 501 aa3.85□□□□□ -1.79
RCL1YOL010W CSM4Q08955 156 aa3.85□□□□□ -1.79
RCL1YOL010W ENV7Q12003 364 aa3.85□□□□□ -1.79
RCL1YOL010W SIA1Q12212 622 aa3.85□□□□□ -1.79
RCL1YOL010W YLR108CQ12259 485 aa3.85□□□□□ -1.79
RCL1YOL010W DCN1Q12395 269 aa3.85□□□□□ -1.79
RCL1YOL010W COX5BP00425 151 aa3.84□□□□□ -1.79
RCL1YOL010W OPI3P05375 206 aa3.84□□□□□ -1.79
RCL1YOL010W SNF4P12904 322 aa3.84□□□□□ -1.79
RCL1YOL010W ZRC1P20107 442 aa3.84□□□□□ -1.79
RCL1YOL010W MEK1P24719 497 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms