RNA–Protein interactions for RNA: YNL077W

APJ1, Transcript of Chaperone with a role in SUMO-mediated protein degradation, yeast

Gene APJ1, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APJ1	YNL077W	HPA3	P39979	161 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	YIL029C	P40538	142 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	OST1	P41543	476 aa	Known RBP	4.38	□□□□□ -1.71
APJ1	YNL077W	GPI14	P47088	403 aa	Known RBP	4.38	□□□□□ -1.71
APJ1	YNL077W	FMP48	P53233	369 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	PEF1	P53238	335 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	VHT1	P53241	593 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	CAF40	P53829	373 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	MEH1	Q02205	184 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	YLR283W	Q05867	314 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	FEX1	Q08913	375 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	SRL2	Q12020	392 aa		4.38	□□□□□ -1.71
APJ1	YNL077W	NCE102	Q12207	173 aa	RIP-Chip data	4.38	□□□□□ -1.71	not detected
APJ1	YNL077W	MET3	P08536	511 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	CAP2	P13517	287 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	YBL010C	P32788	280 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	PPQ1	P32945	549 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	ARC40	P38328	384 aa	Known RBP	4.37	□□□□□ -1.71
APJ1	YNL077W	RRF1	P38771	230 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	ARO9	P38840	513 aa	Predicted RBP	4.37	□□□□□ -1.71
APJ1	YNL077W	YND1	P40009	630 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	YIL060W	P40519	144 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	NSA1	P53136	463 aa	Predicted RBP	4.37	□□□□□ -1.71
APJ1	YNL077W	CRZ1	P53968	678 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	KEI1	Q06346	221 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	RFU1	Q08003	200 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	ODC2	Q99297	307 aa		4.37	□□□□□ -1.71
APJ1	YNL077W	ARO4	P32449	370 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	MIA40	P36046	403 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	FAT1	P38225	669 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	PHM8	P40025	321 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	YIL077C	P40508	320 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	CAT5	P41735	233 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	BXI1	P48558	297 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	TPN1	P53099	579 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	YGR042W	P53227	271 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
APJ1	YNL077W	SKO1	Q02100	647 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	MRX9	Q07349	420 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	YNG1	Q08465	219 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	FEX2	Q08991	375 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	CDC28	P00546	298 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	CHO1	P08456	276 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	RPS23A	P0CX29	145 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	RPS23B	P0CX30	145 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	SAG1	P20840	650 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	YKL069W	P36088	180 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	LSM7	P53905	115 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	TIM44	Q01852	431 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	YDC1	Q02896	317 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	NGL2	Q03264	515 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	HNT1	Q04344	158 aa	Known RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	YPR098C	Q06089	161 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	YTH1	Q06102	208 aa	Predicted RBP	4.36	□□□□□ -1.71
APJ1	YNL077W	GAT3	Q07928	141 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	HUT1	Q12520	339 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	YHR213W-A	Q8TGT4	77 aa		4.36	□□□□□ -1.71
APJ1	YNL077W	PET54	P10834	293 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	URA6	P15700	204 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	DAL80	P26343	269 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	VMA5	P31412	392 aa	Known RBP	4.35	□□□□□ -1.71
APJ1	YNL077W	HYM1	P32464	399 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	VAM7	P32912	316 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	YKL187C	P34231	750 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	MRPL36	P36531	177 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	YHR122W	P38829	231 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	YER079W	P40052	210 aa	Known RBP	4.35	□□□□□ -1.71
APJ1	YNL077W	EGT2	P42835	1041 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	OTU1	P43558	301 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	LSM1	P47017	172 aa	Known RBP	4.35	□□□□□ -1.71
APJ1	YNL077W	LSM8	P47093	109 aa	Known RBP	4.35	□□□□□ -1.71
APJ1	YNL077W	SED1	Q01589	338 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	YMR279C	Q03263	540 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	PHO92	Q06390	306 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	ERP4	Q12450	207 aa		4.35	□□□□□ -1.71
APJ1	YNL077W	REP2	P03872	296 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	RPL3	P14126	387 aa	Known RBP	4.34	□□□□□ -1.71
APJ1	YNL077W	ATG22	P25568	528 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	RFA3	P26755	122 aa	Known RBP	4.34	□□□□□ -1.71
APJ1	YNL077W	MSS1	P32559	526 aa	Predicted RBP	4.34	□□□□□ -1.71
APJ1	YNL077W	ECM14	P38836	430 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	GAT2	P40209	560 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	YKE4	P40544	346 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	AIM25	P47140	327 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	UFD1	P53044	361 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	YDR248C	Q03786	193 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	UTP15	Q04305	513 aa	Known RBP	4.34	□□□□□ -1.71
APJ1	YNL077W	PIN3	Q06449	215 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	ATP14	Q12349	124 aa		4.34	□□□□□ -1.71
APJ1	YNL077W	TRA1	P38811	3744 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	GAL1	P04385	528 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	RPL25	P04456	142 aa	Known RBP	4.33	□□□□□ -1.72
APJ1	YNL077W	SPS4	P09937	338 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	HNM1	P19807	563 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	CNB1	P25296	175 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	PEX4	P29340	183 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	RNP1	P32385	249 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	SPC29	P33419	253 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	CPR5	P35176	225 aa		4.33	□□□□□ -1.72
APJ1	YNL077W	GNA1	P43577	159 aa	Predicted RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms