RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W NNT1Q05874 261 aa1.58□□□□□ -2.16
CSI1YMR025W DAS2Q12084 232 aa1.58□□□□□ -2.16
CSI1YMR025W PRR2Q12310 699 aa1.58□□□□□ -2.16
CSI1YMR025W GTT2Q12390 233 aa1.58□□□□□ -2.16
CSI1YMR025W OCA6Q12454 224 aa1.58□□□□□ -2.16
CSI1YMR025W YMR316C-AI2HB70 103 aa1.57□□□□□ -2.16
CSI1YMR025W YLR462WO13556 202 aa1.57□□□□□ -2.16
CSI1YMR025W IPP1P00817 287 aaKnown RBP1.57□□□□□ -2.16
CSI1YMR025W PHO13P19881 312 aa1.57□□□□□ -2.16
CSI1YMR025W KRE6P32486 720 aa1.57□□□□□ -2.16
CSI1YMR025W CAT2P32796 670 aaKnown RBP1.57□□□□□ -2.16
CSI1YMR025W PRP18P33411 251 aaPredicted RBP1.57□□□□□ -2.16
CSI1YMR025W MAK5P38112 773 aaPredicted RBP1.57□□□□□ -2.16
CSI1YMR025W PHO89P38361 574 aa1.57□□□□□ -2.16
CSI1YMR025W YHL049CP38722 271 aa1.57□□□□□ -2.16
CSI1YMR025W YEL073CP39974 107 aa1.57□□□□□ -2.16
CSI1YMR025W GIM4P40005 111 aaKnown RBP1.57□□□□□ -2.16
CSI1YMR025W MPP6P53725 186 aaPredicted RBP1.57□□□□□ -2.16
CSI1YMR025W SDC1Q03323 175 aa1.57□□□□□ -2.16
CSI1YMR025W OST6Q03723 332 aa1.57□□□□□ -2.16
CSI1YMR025W GMC2Q06201 188 aa1.57□□□□□ -2.16
CSI1YMR025W YLR030WQ07967 263 aa1.57□□□□□ -2.16
CSI1YMR025W ATG5Q12380 294 aa1.57□□□□□ -2.16
CSI1YMR025W YBR056W-AI2HB52 66 aa1.56□□□□□ -2.16
CSI1YMR025W QCR6P00127 147 aa1.56□□□□□ -2.16
CSI1YMR025W BCY1P07278 416 aaKnown RBP1.56□□□□□ -2.16
CSI1YMR025W RPL43AP0CX25 92 aaKnown RBP1.56□□□□□ -2.16
CSI1YMR025W RPL43BP0CX26 92 aa1.56□□□□□ -2.16
CSI1YMR025W CLB6P32943 380 aa1.56□□□□□ -2.16
CSI1YMR025W SFC1P33303 322 aa1.56□□□□□ -2.16
CSI1YMR025W YPT52P36018 234 aaKnown RBP1.56□□□□□ -2.16
CSI1YMR025W LDB7P38210 180 aa1.56□□□□□ -2.16
CSI1YMR025W TRM7P38238 310 aaKnown RBP1.56□□□□□ -2.16
CSI1YMR025W HSM3P38348 480 aa1.56□□□□□ -2.16
CSI1YMR025W DSK2P48510 373 aa1.56□□□□□ -2.16
CSI1YMR025W KAP114P53067 1004 aa1.56□□□□□ -2.16
CSI1YMR025W TIM13P53299 105 aa1.56□□□□□ -2.16
CSI1YMR025W YPL039WQ03080 316 aa1.56□□□□□ -2.16
CSI1YMR025W YMR166CQ03829 368 aa1.56□□□□□ -2.16
CSI1YMR025W CTR3Q06686 241 aa1.56□□□□□ -2.16
CSI1YMR025W YAL064W-BO13512 126 aa1.55□□□□□ -2.16
CSI1YMR025W COX2P00410 251 aa1.55□□□□□ -2.16
CSI1YMR025W RPL24AP04449 155 aaKnown RBP1.55□□□□□ -2.16
CSI1YMR025W HIS3P06633 220 aa1.55□□□□□ -2.16
CSI1YMR025W ZWF1P11412 505 aaKnown RBP1.55□□□□□ -2.16
CSI1YMR025W RSR1P13856 272 aa1.55□□□□□ -2.16
CSI1YMR025W PEX3P28795 441 aa1.55□□□□□ -2.16
CSI1YMR025W CAM1P29547 415 aaKnown RBP1.55□□□□□ -2.16
CSI1YMR025W SRB4P32569 687 aa1.55□□□□□ -2.16
CSI1YMR025W MRPL15P36523 253 aa1.55□□□□□ -2.16
CSI1YMR025W ARN2P38724 620 aa1.55□□□□□ -2.16
CSI1YMR025W YHR045WP38775 560 aa1.55□□□□□ -2.16
CSI1YMR025W RPE1P46969 238 aa1.55□□□□□ -2.16
CSI1YMR025W PIR5P46999 287 aa1.55□□□□□ -2.16
CSI1YMR025W TAD2P47058 250 aa1.55□□□□□ -2.16
CSI1YMR025W MNT4P53745 580 aa1.55□□□□□ -2.16
CSI1YMR025W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
CSI1YMR025W TRM12Q04235 462 aa1.55□□□□□ -2.16
CSI1YMR025W SEC10Q06245 871 aa1.55□□□□□ -2.16
CSI1YMR025W YOL019WQ08157 551 aa1.55□□□□□ -2.16
CSI1YMR025W RRT8Q08219 342 aa1.55□□□□□ -2.16
CSI1YMR025W YOL107WQ12239 342 aa1.55□□□□□ -2.16
CSI1YMR025W YOS9Q99220 542 aa1.55□□□□□ -2.16
CSI1YMR025W RAD10P06838 210 aa1.54□□□□□ -2.16
CSI1YMR025W YCR099CP25657 155 aa1.54□□□□□ -2.16
CSI1YMR025W ERG2P32352 222 aa1.54□□□□□ -2.16
CSI1YMR025W RPT5P33297 434 aaKnown RBP1.54□□□□□ -2.16
CSI1YMR025W HEK2P38199 381 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
CSI1YMR025W TCD1P38756 429 aa1.54□□□□□ -2.16
CSI1YMR025W YIL086CP40503 102 aa1.54□□□□□ -2.16
CSI1YMR025W RPC17P47076 161 aa1.54□□□□□ -2.16
CSI1YMR025W TRM9P49957 279 aa1.54□□□□□ -2.16
CSI1YMR025W PET117Q02771 107 aa1.54□□□□□ -2.16
CSI1YMR025W TVP15Q03860 143 aa1.54□□□□□ -2.16
CSI1YMR025W YBL112CQ3E7Y4 105 aa1.54□□□□□ -2.16
CSI1YMR025W NSP1P14907 823 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W MGM101P32787 269 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W YUH1P35127 236 aa1.53□□□□□ -2.16
CSI1YMR025W NRG2P38082 220 aa1.53□□□□□ -2.16
CSI1YMR025W POP4P38336 279 aa1.53□□□□□ -2.16
CSI1YMR025W YHR127WP38833 243 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W SUR2P38992 349 aa1.53□□□□□ -2.16
CSI1YMR025W NPT1P39683 429 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W YER034WP40022 185 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W DDI1P40087 428 aa1.53□□□□□ -2.16
CSI1YMR025W MDM34P53083 459 aa1.53□□□□□ -2.16
CSI1YMR025W TIM21P53220 239 aa1.53□□□□□ -2.16
CSI1YMR025W MAL13P53338 473 aa1.53□□□□□ -2.16
CSI1YMR025W RPL22BP56628 122 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W YMR114CQ04471 368 aaKnown RBP1.53□□□□□ -2.16
CSI1YMR025W YDR278CQ05612 105 aa1.53□□□□□ -2.16
CSI1YMR025W CTS2Q06350 511 aa1.53□□□□□ -2.16
CSI1YMR025W RDS3Q06835 107 aaPredicted RBP1.53□□□□□ -2.16
CSI1YMR025W COS2P0CX12 379 aa1.52□□□□□ -2.17
CSI1YMR025W COS3P0CX13 379 aa1.52□□□□□ -2.17
CSI1YMR025W GPA2P10823 449 aa1.52□□□□□ -2.17
CSI1YMR025W RPB4P20433 221 aaPredicted RBP1.52□□□□□ -2.17
CSI1YMR025W YCL042WP25572 119 aa1.52□□□□□ -2.17
CSI1YMR025W YCR102CP25608 368 aa1.52□□□□□ -2.17
CSI1YMR025W MGT1P26188 188 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms