RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W RHO1P06780 209 aaKnown RBP2.44□□□□□ -2.02
SPO20YMR017W FBA1P14540 359 aaKnown RBP2.44□□□□□ -2.02
SPO20YMR017W SCL1P21243 252 aaKnown RBP2.44□□□□□ -2.02
SPO20YMR017W MDH3P32419 343 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SPO20YMR017W ECM33P38248 429 aaKnown RBP2.44□□□□□ -2.02
SPO20YMR017W BAT2P47176 376 aaKnown RBP2.44□□□□□ -2.02
SPO20YMR017W ERV29P53337 310 aa2.44□□□□□ -2.02
SPO20YMR017W SSQ1Q05931 657 aaPredicted RBP2.44□□□□□ -2.02
SPO20YMR017W BUD4P47136 1447 aa2.43□□□□□ -2.02
SPO20YMR017W RAS2P01120 322 aaKnown RBP2.43□□□□□ -2.02
SPO20YMR017W YIL001WP40560 513 aa2.43□□□□□ -2.02
SPO20YMR017W CIS3P47001 227 aa2.43□□□□□ -2.02
SPO20YMR017W YGR219WP53307 113 aa2.43□□□□□ -2.02
SPO20YMR017W NEJ1Q06148 342 aa2.43□□□□□ -2.02
SPO20YMR017W YBR063CP38083 404 aa2.42□□□□□ -2.02
SPO20YMR017W COX15P40086 486 aa2.42□□□□□ -2.02
SPO20YMR017W ABF2Q02486 183 aa2.42□□□□□ -2.02
SPO20YMR017W ARR2Q06597 130 aa2.42□□□□□ -2.02
SPO20YMR017W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SPO20YMR017W BOL1Q3E793 110 aa2.42□□□□□ -2.02
SPO20YMR017W TAF2P23255 1407 aa2.42□□□□□ -2.02
SPO20YMR017W TY2B-LR1P0C2J3 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-FP0CX63 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-GR2P0CX64 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-CP25384 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-DR2Q03494 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY1B-DR1Q03855 1755 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-DR3Q07791 1770 aaKnown RBP2.41□□□□□ -2.02
SPO20YMR017W TY2B-OR1Q12113 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-DR1Q12472 1770 aa2.41□□□□□ -2.02
SPO20YMR017W TY2B-OR2Q12501 1770 aa2.41□□□□□ -2.02
SPO20YMR017W MDS3P53094 1487 aa2.41□□□□□ -2.02
SPO20YMR017W SPT3P06844 337 aa2.41□□□□□ -2.02
SPO20YMR017W YHR180WP38868 163 aa2.41□□□□□ -2.02
SPO20YMR017W HEM25Q07534 307 aa2.41□□□□□ -2.02
SPO20YMR017W TPO4Q12256 659 aa2.41□□□□□ -2.02
SPO20YMR017W ECM5Q03214 1411 aa2.41□□□□□ -2.02
SPO20YMR017W TY1B-DR3Q99231 1755 aa2.41□□□□□ -2.02
SPO20YMR017W PEP1P32319 1579 aa2.4□□□□□ -2.02
SPO20YMR017W OAC1P32332 324 aa2.4□□□□□ -2.03
SPO20YMR017W VMA6P32366 345 aaKnown RBP2.4□□□□□ -2.03
SPO20YMR017W BMH2P34730 273 aaKnown RBP2.4□□□□□ -2.03
SPO20YMR017W PHO88P38264 188 aaPredicted RBP2.4□□□□□ -2.03
SPO20YMR017W RTR1P40084 226 aaPredicted RBP2.4□□□□□ -2.03
SPO20YMR017W PRE6P40303 254 aaKnown RBP2.4□□□□□ -2.03
SPO20YMR017W AYR1P40471 297 aa2.4□□□□□ -2.03
SPO20YMR017W RSM25P40496 264 aa2.4□□□□□ -2.03
SPO20YMR017W CDC123Q05791 360 aa2.4□□□□□ -2.03
SPO20YMR017W TY2B-BQ12491 1770 aa2.4□□□□□ -2.03
SPO20YMR017W ESC1Q03661 1658 aaKnown RBP2.4□□□□□ -2.03
SPO20YMR017W RPL24BP24000 155 aaKnown RBP2.39□□□□□ -2.03
SPO20YMR017W MIC12P38341 106 aa2.39□□□□□ -2.03
SPO20YMR017W SKI3P17883 1432 aaKnown RBP2.39□□□□□ -2.03
SPO20YMR017W TY1B-HO13535 1793 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-DR5P0C2I2 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-DR6P0C2I3 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-LR2P0C2I5 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-LR3P0C2I6 1755 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W TY1B-PR1P0C2I9 1755 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W TY1B-PR2P0C2J0 1756 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-PR3P0C2J1 1755 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W TY1B-JR1P47098 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-ML2Q03434 1755 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W TY1B-ER1Q03612 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-ML1Q04711 1755 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W TY1B-BRQ12193 1756 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-GR2Q12269 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-OLQ12273 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-GR3Q12316 1755 aa2.38□□□□□ -2.03
SPO20YMR017W TY1B-PLQ12414 1755 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W TY1B-ORQ92393 1755 aa2.38□□□□□ -2.03
SPO20YMR017W THP2O13539 261 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W YPR170W-BP0C5R9 85 aa2.38□□□□□ -2.03
SPO20YMR017W URA6P15700 204 aa2.38□□□□□ -2.03
SPO20YMR017W ERV15P38312 142 aa2.38□□□□□ -2.03
SPO20YMR017W LSM4P40070 187 aaKnown RBP2.38□□□□□ -2.03
SPO20YMR017W MIC26P50087 233 aa2.38□□□□□ -2.03
SPO20YMR017W YMD8Q03697 442 aa2.38□□□□□ -2.03
SPO20YMR017W YML108WQ03759 105 aa2.38□□□□□ -2.03
SPO20YMR017W RKR1Q04781 1562 aa2.38□□□□□ -2.03
SPO20YMR017W DRS2P39524 1355 aa2.37□□□□□ -2.03
SPO20YMR017W BPT1P14772 1559 aa2.37□□□□□ -2.03
SPO20YMR017W CDC8P00572 216 aa2.37□□□□□ -2.03
SPO20YMR017W YMR31P19955 123 aa2.37□□□□□ -2.03
SPO20YMR017W PPA2P28239 310 aa2.37□□□□□ -2.03
SPO20YMR017W SSO1P32867 290 aa2.37□□□□□ -2.03
SPO20YMR017W SRY1P36007 326 aa2.37□□□□□ -2.03
SPO20YMR017W PEP8P40335 379 aa2.37□□□□□ -2.03
SPO20YMR017W BMT5P40493 336 aa2.37□□□□□ -2.03
SPO20YMR017W YKE4P40544 346 aa2.37□□□□□ -2.03
SPO20YMR017W OTU1P43558 301 aa2.37□□□□□ -2.03
SPO20YMR017W YFR054CP43622 192 aa2.37□□□□□ -2.03
SPO20YMR017W ERG25P53045 309 aa2.37□□□□□ -2.03
SPO20YMR017W CYT2Q00873 224 aa2.37□□□□□ -2.03
SPO20YMR017W USB1Q12208 290 aaKnown RBP2.37□□□□□ -2.03
SPO20YMR017W LSO2Q3E772 92 aaKnown RBP2.37□□□□□ -2.03
SPO20YMR017W YPK9Q12697 1472 aa2.37□□□□□ -2.03
SPO20YMR017W MLP2P40457 1679 aa2.37□□□□□ -2.03
SPO20YMR017W URA8P38627 578 aaPredicted RBP2.36□□□□□ -2.03
SPO20YMR017W YHR022CP38763 256 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 70 ms