RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C SHH3Q04487 196 aa10.94□□□□□ -0.66
BDF1YLR399C YDR262WQ12331 272 aa10.94□□□□□ -0.66
BDF1YLR399C RPL13AQ12690 199 aaPredicted RBP10.94□□□□□ -0.66
BDF1YLR399C HTB1P02293 131 aaKnown RBP10.93□□□□□ -0.66
BDF1YLR399C HTB2P02294 131 aa10.93□□□□□ -0.66
BDF1YLR399C STE18P18852 110 aa10.93□□□□□ -0.66
BDF1YLR399C LSB3P43603 459 aaKnown RBP10.93□□□□□ -0.66
BDF1YLR399C ATG27P46989 271 aa10.93□□□□□ -0.66
BDF1YLR399C TDH3P00359 332 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
BDF1YLR399C ILV5P06168 395 aaKnown RBP10.93□□□□□ -0.66
BDF1YLR399C HAP3P13434 144 aa10.93□□□□□ -0.66
BDF1YLR399C SSH4P32343 579 aa10.93□□□□□ -0.66
BDF1YLR399C YKL071WP36086 256 aa10.93□□□□□ -0.66
BDF1YLR399C THI74Q04083 370 aa10.93□□□□□ -0.66
BDF1YLR399C SME1Q12330 94 aaPredicted RBP10.93□□□□□ -0.66
BDF1YLR399C YLR111WQ12528 110 aa10.93□□□□□ -0.66
BDF1YLR399C NHP6AP11632 93 aaKnown RBP10.92□□□□□ -0.66
BDF1YLR399C SAC7P17121 654 aa10.92□□□□□ -0.66
BDF1YLR399C ANS1P38832 159 aa10.92□□□□□ -0.66
BDF1YLR399C RFA1P22336 621 aaKnown RBP10.91□□□□□ -0.66
BDF1YLR399C OM14P38325 134 aa10.91□□□□□ -0.66
BDF1YLR399C CFD1P40558 293 aa10.91□□□□□ -0.66
BDF1YLR399C YMR082CQ04276 118 aa10.91□□□□□ -0.66
BDF1YLR399C NPC2Q12408 173 aa10.91□□□□□ -0.66
BDF1YLR399C DAL3P32459 195 aa10.91□□□□□ -0.66
BDF1YLR399C YOR062CP36025 268 aa10.91□□□□□ -0.66
BDF1YLR399C YMR262WP38430 313 aa10.91□□□□□ -0.66
BDF1YLR399C YGR250CP53316 781 aaKnown RBP10.91□□□□□ -0.66
BDF1YLR399C AGE1Q04412 482 aa10.91□□□□□ -0.66
BDF1YLR399C ATG10Q07879 167 aa10.91□□□□□ -0.66
BDF1YLR399C CTA1P15202 515 aa10.9□□□□□ -0.66
BDF1YLR399C ISF1P32488 338 aa10.9□□□□□ -0.66
BDF1YLR399C SRB5P32585 307 aa10.9□□□□□ -0.66
BDF1YLR399C MOT2P34909 587 aaKnown RBP10.9□□□□□ -0.66
BDF1YLR399C PEX7P39108 375 aa10.9□□□□□ -0.66
BDF1YLR399C GPP1P41277 250 aaKnown RBP10.9□□□□□ -0.66
BDF1YLR399C GWT1P47026 490 aa10.9□□□□□ -0.66
BDF1YLR399C PAU4P53427 120 aa10.9□□□□□ -0.66
BDF1YLR399C WTM2Q12206 467 aa10.9□□□□□ -0.66
BDF1YLR399C MIG1P27705 504 aa10.89□□□□□ -0.67
BDF1YLR399C POP7P38291 140 aa10.89□□□□□ -0.67
BDF1YLR399C CUE1P38428 203 aa10.89□□□□□ -0.67
BDF1YLR399C PMT3P47190 753 aa10.89□□□□□ -0.67
BDF1YLR399C PEX21P50091 288 aa10.89□□□□□ -0.67
BDF1YLR399C YDR366CP87287 132 aa10.89□□□□□ -0.67
BDF1YLR399C CST9Q06032 482 aa10.89□□□□□ -0.67
BDF1YLR399C YDL242WQ07746 117 aa10.89□□□□□ -0.67
BDF1YLR399C BDS1Q08347 646 aa10.89□□□□□ -0.67
BDF1YLR399C SWM1Q12379 170 aa10.89□□□□□ -0.67
BDF1YLR399C YOP1Q12402 180 aa10.89□□□□□ -0.67
BDF1YLR399C PAU1P0CE88 120 aa10.89□□□□□ -0.67
BDF1YLR399C PAU14P0CE89 120 aa10.89□□□□□ -0.67
BDF1YLR399C PAU6P0CE90 120 aa10.89□□□□□ -0.67
BDF1YLR399C PAU18P0CE91 120 aa10.89□□□□□ -0.67
BDF1YLR399C PAU8P0CE92 120 aa10.89□□□□□ -0.67
BDF1YLR399C PAU11P0CE93 120 aa10.89□□□□□ -0.67
BDF1YLR399C KRR1P25586 316 aaPredicted RBP10.89□□□□□ -0.67
BDF1YLR399C YJU3P28321 313 aa10.89□□□□□ -0.67
BDF1YLR399C PAD1P33751 242 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
BDF1YLR399C PAU13P38725 120 aa10.89□□□□□ -0.67
BDF1YLR399C PAU10Q03050 120 aa10.89□□□□□ -0.67
BDF1YLR399C RCE1Q03530 315 aa10.89□□□□□ -0.67
BDF1YLR399C MTQ2Q03920 221 aaPredicted RBP10.89□□□□□ -0.67
BDF1YLR399C MRPL51Q06090 140 aaPredicted RBP10.89□□□□□ -0.67
BDF1YLR399C PAU20Q08322 120 aa10.89□□□□□ -0.67
BDF1YLR399C FCY22Q12119 530 aa10.89□□□□□ -0.67
BDF1YLR399C PAU9Q3E770 120 aa10.89□□□□□ -0.67
BDF1YLR399C COA2Q3E823 68 aa10.89□□□□□ -0.67
BDF1YLR399C UBA3Q99344 299 aa10.89□□□□□ -0.67
BDF1YLR399C OPI3P05375 206 aa10.88□□□□□ -0.67
BDF1YLR399C AIM29P36154 155 aa10.88□□□□□ -0.67
BDF1YLR399C ALG14P38242 237 aa10.88□□□□□ -0.67
BDF1YLR399C STS1P38637 319 aa10.88□□□□□ -0.67
BDF1YLR399C MNL1P38888 796 aa10.88□□□□□ -0.67
BDF1YLR399C RSM7P47150 247 aa10.88□□□□□ -0.67
BDF1YLR399C TPC1P53257 314 aa10.88□□□□□ -0.67
BDF1YLR399C FLC3P53121 802 aa10.88□□□□□ -0.67
BDF1YLR399C YML096WQ04489 525 aa10.88□□□□□ -0.67
BDF1YLR399C TVP18Q04767 167 aa10.88□□□□□ -0.67
BDF1YLR399C ERV2Q12284 196 aa10.88□□□□□ -0.67
BDF1YLR399C PAR32Q12515 295 aaKnown RBP10.88□□□□□ -0.67
BDF1YLR399C YLR358CO13565 187 aa10.87□□□□□ -0.67
BDF1YLR399C TRM7P38238 310 aaKnown RBP10.87□□□□□ -0.67
BDF1YLR399C HSP10P38910 106 aa10.87□□□□□ -0.67
BDF1YLR399C YGR035CP53222 116 aa10.87□□□□□ -0.67
BDF1YLR399C YGR151CP53287 111 aa10.87□□□□□ -0.67
BDF1YLR399C PIB1Q06651 286 aa10.87□□□□□ -0.67
BDF1YLR399C YFT2Q06676 274 aa10.87□□□□□ -0.67
BDF1YLR399C ADH2P00331 348 aaKnown RBP10.86□□□□□ -0.67
BDF1YLR399C GLC7P32598 312 aaKnown RBP10.86□□□□□ -0.67
BDF1YLR399C FIG1P38224 298 aa10.86□□□□□ -0.67
BDF1YLR399C ERJ5P43613 295 aaPredicted RBP10.86□□□□□ -0.67
BDF1YLR399C YDR524C-BQ3E6R4 66 aa10.86□□□□□ -0.67
BDF1YLR399C TAE1P38340 232 aa10.86□□□□□ -0.67
BDF1YLR399C SPO13P23624 291 aa10.85□□□□□ -0.67
BDF1YLR399C YER188WP40103 239 aa10.85□□□□□ -0.67
BDF1YLR399C SMD3P43321 101 aaKnown RBP10.85□□□□□ -0.67
BDF1YLR399C YJR011CP47086 261 aaPredicted RBP10.85□□□□□ -0.67
BDF1YLR399C BRR6P53062 197 aa10.85□□□□□ -0.67
BDF1YLR399C TGL2P54857 326 aa10.85□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms