RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C SDT1P53078 280 aa2.1□□□□□ -2.07
CSF1YLR087C CTK1Q03957 528 aaKnown RBP2.1□□□□□ -2.07
CSF1YLR087C FMP45Q07651 309 aa2.1□□□□□ -2.07
CSF1YLR087C YPL245WQ12179 454 aaKnown RBP2.1□□□□□ -2.07
CSF1YLR087C SEC11P15367 167 aa2.09□□□□□ -2.07
CSF1YLR087C VPS25P47142 202 aa2.09□□□□□ -2.07
CSF1YLR087C YIP4P53093 235 aa2.09□□□□□ -2.07
CSF1YLR087C MKC7P53379 596 aa2.09□□□□□ -2.07
CSF1YLR087C MCP1Q12106 302 aa2.09□□□□□ -2.07
CSF1YLR087C WSC3Q12215 556 aa2.09□□□□□ -2.07
CSF1YLR087C TMA17Q12513 150 aa2.09□□□□□ -2.07
CSF1YLR087C YLR462WO13556 202 aa2.09□□□□□ -2.07
CSF1YLR087C GCD11P32481 527 aaKnown RBP2.09□□□□□ -2.07
CSF1YLR087C YBR144CP34215 104 aa2.09□□□□□ -2.07
CSF1YLR087C PRE5P40302 234 aaKnown RBP2.09□□□□□ -2.07
CSF1YLR087C YIL152WP40455 235 aa2.09□□□□□ -2.07
CSF1YLR087C IME4P41833 600 aa2.09□□□□□ -2.07
CSF1YLR087C YPL039WQ03080 316 aa2.09□□□□□ -2.07
CSF1YLR087C SPG3Q04398 127 aaPredicted RBP2.09□□□□□ -2.07
CSF1YLR087C ATX2Q12067 313 aa2.09□□□□□ -2.07
CSF1YLR087C CMR1Q12510 522 aaKnown RBP2.09□□□□□ -2.07
CSF1YLR087C YNL277W-AQ3E7Z0 62 aa2.09□□□□□ -2.07
CSF1YLR087C CDC36P06100 191 aaPredicted RBP2.09□□□□□ -2.07
CSF1YLR087C CDC4P07834 779 aa2.09□□□□□ -2.07
CSF1YLR087C MET30P39014 640 aa2.09□□□□□ -2.07
CSF1YLR087C YGR149WP48236 432 aa2.09□□□□□ -2.07
CSF1YLR087C SAY1P53324 424 aa2.09□□□□□ -2.07
CSF1YLR087C GPI11Q06636 219 aa2.09□□□□□ -2.07
CSF1YLR087C RXT3Q07458 294 aa2.09□□□□□ -2.07
CSF1YLR087C RFU1Q08003 200 aa2.09□□□□□ -2.07
CSF1YLR087C BUD20Q08004 166 aaPredicted RBP2.09□□□□□ -2.07
CSF1YLR087C GAS1P22146 559 aaKnown RBP2.09□□□□□ -2.07
CSF1YLR087C YIH1P25637 258 aa2.09□□□□□ -2.07
CSF1YLR087C CWP1P28319 239 aa2.09□□□□□ -2.07
CSF1YLR087C EMC3P36039 253 aa2.09□□□□□ -2.07
CSF1YLR087C RPL14AP36105 138 aaKnown RBP2.09□□□□□ -2.07
CSF1YLR087C GMH1P36125 273 aa2.09□□□□□ -2.07
CSF1YLR087C YBR096WP38256 230 aa2.09□□□□□ -2.07
CSF1YLR087C RPL14BP38754 138 aaKnown RBP2.09□□□□□ -2.07
CSF1YLR087C OYE3P41816 400 aaPredicted RBP2.09□□□□□ -2.07
CSF1YLR087C BNA1P47096 177 aa2.09□□□□□ -2.07
CSF1YLR087C NSG2P53898 299 aa2.09□□□□□ -2.07
CSF1YLR087C VBA1Q04301 562 aa2.09□□□□□ -2.07
CSF1YLR087C NUT2Q06213 157 aa2.09□□□□□ -2.07
CSF1YLR087C MCA1Q08601 432 aa2.09□□□□□ -2.07
CSF1YLR087C RFM1Q12192 310 aa2.09□□□□□ -2.07
CSF1YLR087C PRR2Q12310 699 aa2.09□□□□□ -2.07
CSF1YLR087C FOL3Q12676 427 aaPredicted RBP2.09□□□□□ -2.07
CSF1YLR087C YHR210CP38893 341 aa2.09□□□□□ -2.08
CSF1YLR087C FAD1P38913 306 aa2.09□□□□□ -2.08
CSF1YLR087C RPN14P53196 417 aa2.09□□□□□ -2.08
CSF1YLR087C RTK1Q12100 620 aaPredicted RBP2.09□□□□□ -2.08
CSF1YLR087C MRH1Q12117 320 aaPredicted RBP2.09□□□□□ -2.08
CSF1YLR087C STE7P06784 515 aa2.09□□□□□ -2.08
CSF1YLR087C CPT1P17898 393 aa2.09□□□□□ -2.08
CSF1YLR087C ARO2P28777 376 aaKnown RBP2.09□□□□□ -2.08
CSF1YLR087C ACB1P31787 87 aa2.09□□□□□ -2.08
CSF1YLR087C PAN3P36102 679 aaPredicted RBP2.09□□□□□ -2.08
CSF1YLR087C SCO2P38072 301 aa2.09□□□□□ -2.08
CSF1YLR087C RPB11P38902 120 aa2.09□□□□□ -2.08
CSF1YLR087C IPL1P38991 367 aa2.09□□□□□ -2.08
CSF1YLR087C MRPL22P53881 309 aa2.09□□□□□ -2.08
CSF1YLR087C GPI15P53961 229 aa2.09□□□□□ -2.08
CSF1YLR087C NAT4Q04751 285 aa2.09□□□□□ -2.08
CSF1YLR087C FRE6Q12473 712 aa2.09□□□□□ -2.08
CSF1YLR087C CPR2P23285 205 aa2.09□□□□□ -2.08
CSF1YLR087C NAR1P23503 491 aaKnown RBP2.09□□□□□ -2.08
CSF1YLR087C ASP1P38986 381 aaPredicted RBP2.09□□□□□ -2.08
CSF1YLR087C GET2P40056 285 aa2.09□□□□□ -2.08
CSF1YLR087C DSD1P53095 428 aa2.09□□□□□ -2.08
CSF1YLR087C HED1Q03937 162 aa2.09□□□□□ -2.08
CSF1YLR087C YKL065W-AQ2V2P2 73 aa2.09□□□□□ -2.08
CSF1YLR087C GAL2P13181 574 aa2.08□□□□□ -2.08
CSF1YLR087C TRM7P38238 310 aaKnown RBP2.08□□□□□ -2.08
CSF1YLR087C YNL195CP40168 261 aa2.08□□□□□ -2.08
CSF1YLR087C XBP1P40489 647 aa2.08□□□□□ -2.08
CSF1YLR087C GPI2P46961 280 aa2.08□□□□□ -2.08
CSF1YLR087C YDR248CQ03786 193 aa2.08□□□□□ -2.08
CSF1YLR087C YMR252CQ04814 134 aa2.08□□□□□ -2.08
CSF1YLR087C YDR286CQ05530 114 aa2.08□□□□□ -2.08
CSF1YLR087C YFT2Q06676 274 aa2.08□□□□□ -2.08
CSF1YLR087C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
CSF1YLR087C YPR202WQ08993 238 aa2.08□□□□□ -2.08
CSF1YLR087C MHF1Q3E835 90 aa2.08□□□□□ -2.08
CSF1YLR087C ZRT3P34240 503 aa2.08□□□□□ -2.08
CSF1YLR087C GNA1P43577 159 aaPredicted RBP2.08□□□□□ -2.08
CSF1YLR087C MEC3Q02574 474 aa2.08□□□□□ -2.08
CSF1YLR087C CBS2P14905 389 aa2.08□□□□□ -2.08
CSF1YLR087C MTH1P35198 433 aa2.08□□□□□ -2.08
CSF1YLR087C KTR5P53966 522 aaPredicted RBP2.08□□□□□ -2.08
CSF1YLR087C GPI19Q04082 140 aa2.08□□□□□ -2.08
CSF1YLR087C ARC18Q05933 178 aaKnown RBP2.08□□□□□ -2.08
CSF1YLR087C STP4Q07351 490 aa2.08□□□□□ -2.08
CSF1YLR087C YOR012WQ12351 137 aa2.08□□□□□ -2.08
CSF1YLR087C RPS22BQ3E7Y3 130 aaKnown RBP2.08□□□□□ -2.08
CSF1YLR087C YPL229WQ99395 206 aa2.08□□□□□ -2.08
CSF1YLR087C LRE1P25579 583 aaKnown RBP2.08□□□□□ -2.08
CSF1YLR087C PEX34P25584 144 aa2.08□□□□□ -2.08
CSF1YLR087C YKL044WP36092 106 aa2.08□□□□□ -2.08
CSF1YLR087C YKR070WP36151 352 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms