RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C GRH1Q04410 372 aaKnown RBP1.6□□□□□ -2.15
UBP11YKR098C YML096WQ04489 525 aa1.6□□□□□ -2.15
UBP11YKR098C FEX1Q08913 375 aa1.6□□□□□ -2.15
UBP11YKR098C FEX2Q08991 375 aa1.6□□□□□ -2.15
UBP11YKR098C BBP1Q12365 385 aa1.6□□□□□ -2.15
UBP11YKR098C FKS1P38631 1876 aaKnown RBP1.6□□□□□ -2.15
UBP11YKR098C GCN3P14741 305 aa1.59□□□□□ -2.15
UBP11YKR098C YPT52P36018 234 aaKnown RBP1.59□□□□□ -2.15
UBP11YKR098C FAR7P43592 221 aa1.59□□□□□ -2.15
UBP11YKR098C RMR1P53060 241 aa1.59□□□□□ -2.15
UBP11YKR098C ABF2Q02486 183 aa1.59□□□□□ -2.15
UBP11YKR098C YPL257WQ08974 193 aa1.59□□□□□ -2.15
UBP11YKR098C SPS18P32572 300 aa1.59□□□□□ -2.16
UBP11YKR098C APS1P35181 156 aa1.59□□□□□ -2.16
UBP11YKR098C OST2P46964 130 aa1.59□□□□□ -2.16
UBP11YKR098C YML108WQ03759 105 aa1.59□□□□□ -2.16
UBP11YKR098C YDR114CQ04597 100 aa1.59□□□□□ -2.16
UBP11YKR098C LSO2Q3E772 92 aaKnown RBP1.59□□□□□ -2.16
UBP11YKR098C YOR020W-AQ3E824 90 aa1.59□□□□□ -2.16
UBP11YKR098C DRS2P39524 1355 aa1.59□□□□□ -2.16
UBP11YKR098C SEC4P07560 215 aaKnown RBP1.58□□□□□ -2.16
UBP11YKR098C GRE3P38715 327 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
UBP11YKR098C IRC22P40006 225 aa1.58□□□□□ -2.16
UBP11YKR098C PRM8P53174 237 aa1.58□□□□□ -2.16
UBP11YKR098C CAB4P53332 305 aa1.58□□□□□ -2.16
UBP11YKR098C PET191Q02772 108 aa1.58□□□□□ -2.16
UBP11YKR098C YMR279CQ03263 540 aa1.58□□□□□ -2.16
UBP11YKR098C CDD1Q06549 142 aa1.58□□□□□ -2.16
UBP11YKR098C Q0255P03881 472 aa1.58□□□□□ -2.16
UBP11YKR098C DPM1P14020 267 aaKnown RBP1.58□□□□□ -2.16
UBP11YKR098C KRE1P17260 313 aa1.58□□□□□ -2.16
UBP11YKR098C RSA4P25382 515 aaKnown RBP1.58□□□□□ -2.16
UBP11YKR098C MRPL28P36527 147 aa1.58□□□□□ -2.16
UBP11YKR098C DOG2P38773 246 aa1.58□□□□□ -2.16
UBP11YKR098C DOG1P38774 246 aa1.58□□□□□ -2.16
UBP11YKR098C FIS1P40515 155 aa1.58□□□□□ -2.16
UBP11YKR098C YJR141WP47172 347 aaPredicted RBP1.58□□□□□ -2.16
UBP11YKR098C PEX12Q04370 399 aa1.58□□□□□ -2.16
UBP11YKR098C FCY2P17064 533 aa1.57□□□□□ -2.16
UBP11YKR098C TCA17P32613 152 aa1.57□□□□□ -2.16
UBP11YKR098C YBR063CP38083 404 aa1.57□□□□□ -2.16
UBP11YKR098C ECM33P38248 429 aaKnown RBP1.57□□□□□ -2.16
UBP11YKR098C YHR125WP38831 101 aa1.57□□□□□ -2.16
UBP11YKR098C CTR2P38865 189 aa1.57□□□□□ -2.16
UBP11YKR098C YER034WP40022 185 aaKnown RBP1.57□□□□□ -2.16
UBP11YKR098C SPO73P40031 143 aa1.57□□□□□ -2.16
UBP11YKR098C TIF34P40217 347 aaKnown RBP1.57□□□□□ -2.16
UBP11YKR098C ARC15P40518 154 aaRIP-Chip data1.57□□□□□ -2.16not detected
UBP11YKR098C YJR056CP47115 236 aa1.57□□□□□ -2.16
UBP11YKR098C YGL088WP53151 121 aa1.57□□□□□ -2.16
UBP11YKR098C MMS2P53152 137 aa1.57□□□□□ -2.16
UBP11YKR098C LPP1Q04396 274 aa1.57□□□□□ -2.16
UBP11YKR098C ATG39Q06159 398 aa1.57□□□□□ -2.16
UBP11YKR098C SAS5Q99314 248 aa1.57□□□□□ -2.16
UBP11YKR098C ATP7P30902 174 aa1.57□□□□□ -2.16
UBP11YKR098C TRM5P38793 499 aa1.57□□□□□ -2.16
UBP11YKR098C COG3P40094 801 aa1.57□□□□□ -2.16
UBP11YKR098C YIL001WP40560 513 aa1.57□□□□□ -2.16
UBP11YKR098C SMD3P43321 101 aaKnown RBP1.57□□□□□ -2.16
UBP11YKR098C HOP2P53187 214 aa1.57□□□□□ -2.16
UBP11YKR098C SSU72P53538 206 aaPredicted RBP1.57□□□□□ -2.16
UBP11YKR098C PRM7Q12459 698 aa1.57□□□□□ -2.16
UBP11YKR098C CCA1P21269 546 aa1.56□□□□□ -2.16
UBP11YKR098C MIG1P27705 504 aa1.56□□□□□ -2.16
UBP11YKR098C SDH4P37298 181 aa1.56□□□□□ -2.16
UBP11YKR098C YAR068WP39564 161 aa1.56□□□□□ -2.16
UBP11YKR098C YER188WP40103 239 aa1.56□□□□□ -2.16
UBP11YKR098C DIA1P54005 336 aa1.56□□□□□ -2.16
UBP11YKR098C YMD8Q03697 442 aa1.56□□□□□ -2.16
UBP11YKR098C GPM2Q12008 311 aa1.56□□□□□ -2.16
UBP11YKR098C CDC7P06243 507 aa1.55□□□□□ -2.16
UBP11YKR098C ADH3P07246 375 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C YHR032W-AP0C5N6 59 aa1.55□□□□□ -2.16
UBP11YKR098C YPR170W-BP0C5R9 85 aa1.55□□□□□ -2.16
UBP11YKR098C YKR032WP36127 104 aa1.55□□□□□ -2.16
UBP11YKR098C ERG10P41338 398 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C YJL016WP47072 561 aa1.55□□□□□ -2.16
UBP11YKR098C LSM7P53905 115 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C YNL010WP53981 241 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C YNG1Q08465 219 aa1.55□□□□□ -2.16
UBP11YKR098C TDA8Q6B2U8 126 aa1.55□□□□□ -2.16
UBP11YKR098C YHR214C-EQ8TGK0 99 aa1.55□□□□□ -2.16
UBP11YKR098C RPL9AP05738 191 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C NOP1P15646 327 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C RSM25P40496 264 aa1.55□□□□□ -2.16
UBP11YKR098C YJL144WP47009 104 aa1.55□□□□□ -2.16
UBP11YKR098C RPL9BP51401 191 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C YGR050CP53231 118 aa1.55□□□□□ -2.16
UBP11YKR098C APJ1P53940 528 aa1.55□□□□□ -2.16
UBP11YKR098C GGA1Q06336 557 aa1.55□□□□□ -2.16
UBP11YKR098C GRE1Q08969 168 aa1.55□□□□□ -2.16
UBP11YKR098C USB1Q12208 290 aaKnown RBP1.55□□□□□ -2.16
UBP11YKR098C QCR6P00127 147 aa1.54□□□□□ -2.16
UBP11YKR098C RPL26AP05743 127 aaKnown RBP1.54□□□□□ -2.16
UBP11YKR098C GRX2P17695 143 aaKnown RBP1.54□□□□□ -2.16
UBP11YKR098C SEC72P39742 193 aaKnown RBP1.54□□□□□ -2.16
UBP11YKR098C AIM25P47140 327 aa1.54□□□□□ -2.16
UBP11YKR098C YGR026WP53217 278 aa1.54□□□□□ -2.16
UBP11YKR098C RPL26BP53221 127 aaKnown RBP1.54□□□□□ -2.16
UBP11YKR098C GAS3Q03655 524 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms