RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeastyeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX1YKL197C YMR130WQ04223 302 aa3.06□□□□□ -1.92
PEX1YKL197C COQ11Q05892 277 aa3.06□□□□□ -1.92
PEX1YKL197C ATG5Q12380 294 aa3.06□□□□□ -1.92
PEX1YKL197C YDL199CQ12407 687 aa3.06□□□□□ -1.92
PEX1YKL197C YPR145C-AQ2V2P0 78 aa3.06□□□□□ -1.92
PEX1YKL197C RPL11BQ3E757 174 aaPredicted RBP3.06□□□□□ -1.92
PEX1YKL197C ISD11Q6Q560 94 aa3.06□□□□□ -1.92
PEX1YKL197C YLR149CQ99296 730 aa3.06□□□□□ -1.92
PEX1YKL197C BGL2P15703 313 aaKnown RBP3.06□□□□□ -1.92
PEX1YKL197C YCL002CP25565 263 aa3.06□□□□□ -1.92
PEX1YKL197C PDC2P32896 925 aa3.06□□□□□ -1.92
PEX1YKL197C PAN3P36102 679 aaPredicted RBP3.06□□□□□ -1.92
PEX1YKL197C RTC2P38279 296 aa3.06□□□□□ -1.92
PEX1YKL197C TSL1P38427 1098 aaKnown RBP3.06□□□□□ -1.92
PEX1YKL197C YHK8P38776 514 aa3.06□□□□□ -1.92
PEX1YKL197C YIL152WP40455 235 aa3.06□□□□□ -1.92
PEX1YKL197C CHA4P43634 648 aa3.06□□□□□ -1.92
PEX1YKL197C YMR099CQ03161 297 aaKnown RBP3.06□□□□□ -1.92
PEX1YKL197C SHS1Q07657 551 aa3.06□□□□□ -1.92
PEX1YKL197C YOR342CQ12182 319 aa3.06□□□□□ -1.92
PEX1YKL197C COX17Q12287 69 aa3.06□□□□□ -1.92
PEX1YKL197C YPR071WQ12346 211 aa3.06□□□□□ -1.92
PEX1YKL197C MHT1Q12525 324 aa3.06□□□□□ -1.92
PEX1YKL197C TIR1P10863 254 aa3.05□□□□□ -1.92
PEX1YKL197C MIG1P27705 504 aa3.05□□□□□ -1.92
PEX1YKL197C OAC1P32332 324 aa3.05□□□□□ -1.92
PEX1YKL197C CMC1P36064 111 aa3.05□□□□□ -1.92
PEX1YKL197C ASC1P38011 319 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C MDM31P38880 579 aa3.05□□□□□ -1.92
PEX1YKL197C LYS12P40495 371 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C COQ5P49017 307 aa3.05□□□□□ -1.92
PEX1YKL197C YGR283CP53336 341 aaPredicted RBP3.05□□□□□ -1.92
PEX1YKL197C CSL4P53859 292 aaPredicted RBP3.05□□□□□ -1.92
PEX1YKL197C CDC14Q00684 551 aa3.05□□□□□ -1.92
PEX1YKL197C HPT1Q04178 221 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C TRM12Q04235 462 aa3.05□□□□□ -1.92
PEX1YKL197C GRX8Q05926 109 aa3.05□□□□□ -1.92
PEX1YKL197C YLR224WQ05947 369 aa3.05□□□□□ -1.92
PEX1YKL197C YDL085C-AQ3E7B7 68 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C TKL1P23254 680 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C NTF2P33331 125 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C CUE1P38428 203 aa3.05□□□□□ -1.92
PEX1YKL197C GET2P40056 285 aa3.05□□□□□ -1.92
PEX1YKL197C VHS2P40463 436 aa3.05□□□□□ -1.92
PEX1YKL197C XPT1P47165 209 aa3.05□□□□□ -1.92
PEX1YKL197C YNR071CP53757 342 aa3.05□□□□□ -1.92
PEX1YKL197C WSC2P53832 503 aa3.05□□□□□ -1.92
PEX1YKL197C KTR5P53966 522 aaPredicted RBP3.05□□□□□ -1.92
PEX1YKL197C GRH1Q04410 372 aaKnown RBP3.05□□□□□ -1.92
PEX1YKL197C INM2Q05533 292 aa3.05□□□□□ -1.92
PEX1YKL197C YOL131WQ08270 108 aa3.05□□□□□ -1.92
PEX1YKL197C NAT5Q08689 176 aa3.05□□□□□ -1.92
PEX1YKL197C NUS1Q12063 375 aa3.05□□□□□ -1.92
PEX1YKL197C SPO24Q3E752 67 aa3.05□□□□□ -1.92
PEX1YKL197C YEL009C-AA0A023PZF2 135 aa3.04□□□□□ -1.92
PEX1YKL197C ATP5P09457 212 aa3.04□□□□□ -1.92
PEX1YKL197C UBI4P0CG63 381 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C RPL18AP0CX49 186 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C RPL18BP0CX50 186 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C RPL12AP0CX53 165 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C RPL12BP0CX54 165 aa3.04□□□□□ -1.92
PEX1YKL197C PDE1P22434 369 aa3.04□□□□□ -1.92
PEX1YKL197C RNQ1P25367 405 aa3.04□□□□□ -1.92
PEX1YKL197C LSB5P25369 354 aa3.04□□□□□ -1.92
PEX1YKL197C FMT1P32785 401 aa3.04□□□□□ -1.92
PEX1YKL197C YBL029WP38201 376 aa3.04□□□□□ -1.92
PEX1YKL197C NDT80P38830 627 aa3.04□□□□□ -1.92
PEX1YKL197C PTI1P39927 425 aaPredicted RBP3.04□□□□□ -1.92
PEX1YKL197C PRE6P40303 254 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C YGR149WP48236 432 aa3.04□□□□□ -1.92
PEX1YKL197C UBC9P50623 157 aaPredicted RBP3.04□□□□□ -1.92
PEX1YKL197C CDH1P53197 566 aa3.04□□□□□ -1.92
PEX1YKL197C APJ1P53940 528 aa3.04□□□□□ -1.92
PEX1YKL197C NRG1Q03125 231 aa3.04□□□□□ -1.92
PEX1YKL197C SNT309Q06091 175 aaPredicted RBP3.04□□□□□ -1.92
PEX1YKL197C HRT1Q08273 121 aa3.04□□□□□ -1.92
PEX1YKL197C YPL229WQ99395 206 aa3.04□□□□□ -1.92
PEX1YKL197C GSC2P40989 1895 aa3.04□□□□□ -1.92
PEX1YKL197C SNF4P12904 322 aa3.04□□□□□ -1.92
PEX1YKL197C CAP2P13517 287 aa3.04□□□□□ -1.92
PEX1YKL197C ERG8P24521 451 aa3.04□□□□□ -1.92
PEX1YKL197C SNC1P31109 117 aa3.04□□□□□ -1.92
PEX1YKL197C SNC2P33328 115 aa3.04□□□□□ -1.92
PEX1YKL197C YKL187CP34231 750 aa3.04□□□□□ -1.92
PEX1YKL197C ATG8P38182 117 aaRIP-Chip data3.04□□□□□ -1.92not detected
PEX1YKL197C YBR032WP38223 100 aa3.04□□□□□ -1.92
PEX1YKL197C RPS20P38701 121 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C CHS7P38843 316 aa3.04□□□□□ -1.92
PEX1YKL197C GAA1P39012 614 aa3.04□□□□□ -1.92
PEX1YKL197C AYR1P40471 297 aa3.04□□□□□ -1.92
PEX1YKL197C MEP2P41948 499 aa3.04□□□□□ -1.92
PEX1YKL197C SSY5P47002 699 aa3.04□□□□□ -1.92
PEX1YKL197C TOS2P50078 622 aa3.04□□□□□ -1.92
PEX1YKL197C INP1Q03694 420 aa3.04□□□□□ -1.92
PEX1YKL197C YML018CQ03730 393 aa3.04□□□□□ -1.92
PEX1YKL197C YLR030WQ07967 263 aa3.04□□□□□ -1.92
PEX1YKL197C TRM10Q12400 293 aa3.04□□□□□ -1.92
PEX1YKL197C RPL13AQ12690 199 aaPredicted RBP3.04□□□□□ -1.92
PEX1YKL197C RPS19AP07280 144 aaKnown RBP3.04□□□□□ -1.92
PEX1YKL197C RPS19BP07281 144 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms