RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W RRG7Q08774 242 aaPredicted RBP3.05□□□□□ -1.92
UBP12YJL197W YOR376WQ08900 122 aa3.05□□□□□ -1.92
UBP12YJL197W YBR298C-AQ8TGK4 73 aa3.05□□□□□ -1.92
UBP12YJL197W YPL257WQ08974 193 aa3.05□□□□□ -1.92
UBP12YJL197W SEC14P24280 304 aaKnown RBP3.05□□□□□ -1.92
UBP12YJL197W AIM25P47140 327 aa3.05□□□□□ -1.92
UBP12YJL197W HNT1Q04344 158 aaKnown RBP3.05□□□□□ -1.92
UBP12YJL197W API2Q04413 109 aa3.05□□□□□ -1.92
UBP12YJL197W YDR115WQ04598 105 aa3.05□□□□□ -1.92
UBP12YJL197W PEX11Q12462 236 aa3.05□□□□□ -1.92
UBP12YJL197W THO2P53552 1597 aaKnown RBP3.05□□□□□ -1.92
UBP12YJL197W SEC22P22214 214 aa3.04□□□□□ -1.92
UBP12YJL197W YHL044WP38727 235 aa3.04□□□□□ -1.92
UBP12YJL197W DOG1P38774 246 aa3.04□□□□□ -1.92
UBP12YJL197W HMF1P40037 129 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W CAT5P41735 233 aa3.04□□□□□ -1.92
UBP12YJL197W YGL204CP53089 101 aa3.04□□□□□ -1.92
UBP12YJL197W YNL010WP53981 241 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W IPP1P00817 287 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W AHC2P25649 128 aa3.04□□□□□ -1.92
UBP12YJL197W AGE2P40529 298 aa3.04□□□□□ -1.92
UBP12YJL197W COQ5P49017 307 aa3.04□□□□□ -1.92
UBP12YJL197W YGR018CP53211 109 aa3.04□□□□□ -1.92
UBP12YJL197W SWT21P53873 357 aaPredicted RBP3.04□□□□□ -1.92
UBP12YJL197W ECM11Q04110 302 aa3.04□□□□□ -1.92
UBP12YJL197W RIO1Q12196 484 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W PET54P10834 293 aa3.04□□□□□ -1.92
UBP12YJL197W YIL054WP40524 105 aa3.04□□□□□ -1.92
UBP12YJL197W IGD1P43598 195 aa3.04□□□□□ -1.92
UBP12YJL197W RPE1P46969 238 aa3.04□□□□□ -1.92
UBP12YJL197W YGR050CP53231 118 aa3.04□□□□□ -1.92
UBP12YJL197W ACT1P60010 375 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W INP1Q03694 420 aa3.04□□□□□ -1.92
UBP12YJL197W PAL1Q05518 499 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W YPS3Q12303 508 aa3.04□□□□□ -1.92
UBP12YJL197W SMT3Q12306 101 aaKnown RBP3.04□□□□□ -1.92
UBP12YJL197W EPT1P22140 391 aa3.03□□□□□ -1.92
UBP12YJL197W UPS2P35200 230 aa3.03□□□□□ -1.92
UBP12YJL197W PRM10P42946 383 aa3.03□□□□□ -1.92
UBP12YJL197W MHT1Q12525 324 aa3.03□□□□□ -1.92
UBP12YJL197W CDC7P06243 507 aa3.03□□□□□ -1.92
UBP12YJL197W CUP2P15315 225 aa3.03□□□□□ -1.92
UBP12YJL197W DOG2P38773 246 aa3.03□□□□□ -1.92
UBP12YJL197W SPL2P38839 148 aa3.03□□□□□ -1.92
UBP12YJL197W UFE1P41834 346 aa3.03□□□□□ -1.92
UBP12YJL197W DFM1Q12743 341 aaKnown RBP3.03□□□□□ -1.92
UBP12YJL197W SEN2P16658 377 aa3.03□□□□□ -1.92
UBP12YJL197W ASP1P38986 381 aaPredicted RBP3.03□□□□□ -1.92
UBP12YJL197W TEM1P38987 245 aa3.03□□□□□ -1.92
UBP12YJL197W MIG3P39943 394 aa3.03□□□□□ -1.92
UBP12YJL197W PKR1Q03880 122 aaKnown RBP3.03□□□□□ -1.92
UBP12YJL197W SUE1Q06524 206 aa3.03□□□□□ -1.92
UBP12YJL197W HTL1Q9URQ5 78 aa3.03□□□□□ -1.92
UBP12YJL197W TAF2P23255 1407 aa3.02□□□□□ -1.93
UBP12YJL197W CNB1P25296 175 aa3.02□□□□□ -1.93
UBP12YJL197W RMD6P39975 231 aa3.02□□□□□ -1.93
UBP12YJL197W SYS1P41544 203 aa3.02□□□□□ -1.93
UBP12YJL197W YMD8Q03697 442 aa3.02□□□□□ -1.93
UBP12YJL197W TVP15Q03860 143 aa3.02□□□□□ -1.93
UBP12YJL197W YLR031WQ07978 186 aa3.02□□□□□ -1.93
UBP12YJL197W TIM22Q12328 207 aa3.02□□□□□ -1.93
UBP12YJL197W YOR020W-AQ3E824 90 aa3.02□□□□□ -1.93
UBP12YJL197W YLR462WO13556 202 aa3.02□□□□□ -1.93
UBP12YJL197W RPS24AP0CX31 135 aaKnown RBP3.02□□□□□ -1.93
UBP12YJL197W RPS24BP0CX32 135 aaKnown RBP3.02□□□□□ -1.93
UBP12YJL197W IDP1P21954 428 aaKnown RBP3.02□□□□□ -1.93
UBP12YJL197W SMP1P38128 452 aa3.02□□□□□ -1.93
UBP12YJL197W CYC2P38909 366 aa3.02□□□□□ -1.93
UBP12YJL197W YEL075CP39972 122 aa3.02□□□□□ -1.93
UBP12YJL197W FLC3P53121 802 aa3.02□□□□□ -1.93
UBP12YJL197W MPA43P53583 542 aaPredicted RBP3.02□□□□□ -1.93
UBP12YJL197W ATG5Q12380 294 aa3.02□□□□□ -1.93
UBP12YJL197W SIR2P06700 562 aa3.02□□□□□ -1.93
UBP12YJL197W PTM1P32857 523 aa3.02□□□□□ -1.93
UBP12YJL197W TVP38P36164 337 aa3.02□□□□□ -1.93
UBP12YJL197W RFS1P38234 210 aaKnown RBP3.02□□□□□ -1.93
UBP12YJL197W YGL118CP53132 145 aa3.02□□□□□ -1.93
UBP12YJL197W HSK3P69852 69 aa3.02□□□□□ -1.93
UBP12YJL197W TMA20P89886 181 aaPredicted RBP3.02□□□□□ -1.93
UBP12YJL197W YHR139C-AO13536 103 aa3.01□□□□□ -1.93
UBP12YJL197W BUB2P26448 306 aaPredicted RBP3.01□□□□□ -1.93
UBP12YJL197W ZRT3P34240 503 aa3.01□□□□□ -1.93
UBP12YJL197W AIM34Q03673 198 aa3.01□□□□□ -1.93
UBP12YJL197W SHH4Q06236 168 aa3.01□□□□□ -1.93
UBP12YJL197W REV3P14284 1504 aa3.01□□□□□ -1.93
UBP12YJL197W YJL028WP47062 111 aa3.01□□□□□ -1.93
UBP12YJL197W YDR476CQ03362 224 aa3.01□□□□□ -1.93
UBP12YJL197W GRH1Q04410 372 aaKnown RBP3.01□□□□□ -1.93
UBP12YJL197W ERG24P32462 438 aaKnown RBP3.01□□□□□ -1.93
UBP12YJL197W VMA22P38784 181 aa3.01□□□□□ -1.93
UBP12YJL197W UFD1P53044 361 aa3.01□□□□□ -1.93
UBP12YJL197W HST4P53688 370 aa3.01□□□□□ -1.93
UBP12YJL197W SWP1Q02795 286 aa3.01□□□□□ -1.93
UBP12YJL197W BBP1Q12365 385 aa3.01□□□□□ -1.93
UBP12YJL197W SWI1P09547 1314 aa3□□□□□ -1.93
UBP12YJL197W YCR090CP25654 182 aaKnown RBP3□□□□□ -1.93
UBP12YJL197W IMP4P53941 290 aaKnown RBP3□□□□□ -1.93
UBP12YJL197W EMI1Q04406 187 aa3□□□□□ -1.93
UBP12YJL197W YPR011CQ12251 326 aa3□□□□□ -1.93
UBP12YJL197W YLR046CQ12253 270 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms