RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C MDH1P17505 334 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
PUP2YGR253C DPB2P24482 689 aaPredicted RBP5.82□□□□□ -1.48
PUP2YGR253C RNA14P25298 677 aaKnown RBP5.82□□□□□ -1.48
PUP2YGR253C PAU2P32612 120 aa5.82□□□□□ -1.48
PUP2YGR253C NVJ1P38881 321 aa5.82□□□□□ -1.48
PUP2YGR253C NOP16P40007 231 aaKnown RBP5.82□□□□□ -1.48
PUP2YGR253C DDI1P40087 428 aa5.82□□□□□ -1.48
PUP2YGR253C GNA1P43577 159 aaPredicted RBP5.82□□□□□ -1.48
PUP2YGR253C HNT2P49775 206 aa5.82□□□□□ -1.48
PUP2YGR253C DUO1P53168 247 aaKnown RBP5.82□□□□□ -1.48
PUP2YGR253C TLG1Q03322 224 aa5.82□□□□□ -1.48
PUP2YGR253C FIT1Q04433 528 aa5.82□□□□□ -1.48
PUP2YGR253C NEJ1Q06148 342 aa5.82□□□□□ -1.48
PUP2YGR253C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
PUP2YGR253C JID1Q12350 301 aa5.82□□□□□ -1.48
PUP2YGR253C YOR192C-CQ3E736 78 aa5.82□□□□□ -1.48
PUP2YGR253C YLR099W-AQ3E798 87 aa5.82□□□□□ -1.48
PUP2YGR253C FUR4P05316 633 aaKnown RBP5.81□□□□□ -1.48
PUP2YGR253C HEM13P11353 328 aaKnown RBP5.81□□□□□ -1.48
PUP2YGR253C YCR061WP25639 631 aa5.81□□□□□ -1.48
PUP2YGR253C AHC2P25649 128 aa5.81□□□□□ -1.48
PUP2YGR253C ARO4P32449 370 aaKnown RBP5.81□□□□□ -1.48
PUP2YGR253C ERG24P32462 438 aaKnown RBP5.81□□□□□ -1.48
PUP2YGR253C VAM7P32912 316 aa5.81□□□□□ -1.48
PUP2YGR253C SWD3P38123 315 aa5.81□□□□□ -1.48
PUP2YGR253C NTC20P38302 140 aaPredicted RBP5.81□□□□□ -1.48
PUP2YGR253C MDJ2P42834 146 aa5.81□□□□□ -1.48
PUP2YGR253C TRM10Q12400 293 aa5.81□□□□□ -1.48
PUP2YGR253C OLE1P21147 510 aaKnown RBP5.8□□□□□ -1.48
PUP2YGR253C PRE7P23724 241 aaKnown RBP5.8□□□□□ -1.48
PUP2YGR253C PET18P25362 215 aa5.8□□□□□ -1.48
PUP2YGR253C ERG2P32352 222 aa5.8□□□□□ -1.48
PUP2YGR253C PRS4P38063 326 aaPredicted RBP5.8□□□□□ -1.48
PUP2YGR253C SSZ1P38788 538 aaKnown RBP5.8□□□□□ -1.48
PUP2YGR253C GWT1P47026 490 aa5.8□□□□□ -1.48
PUP2YGR253C VPS55P47111 140 aa5.8□□□□□ -1.48
PUP2YGR253C YDR415CQ04033 374 aaPredicted RBP5.8□□□□□ -1.48
PUP2YGR253C NOC4Q06512 552 aaPredicted RBP5.8□□□□□ -1.48
PUP2YGR253C YDL086WQ07505 273 aa5.8□□□□□ -1.48
PUP2YGR253C MET32Q12041 191 aa5.8□□□□□ -1.48
PUP2YGR253C RPS31P05759 152 aaKnown RBP5.79□□□□□ -1.48
PUP2YGR253C YLL053CP0CD98 152 aa5.79□□□□□ -1.48
PUP2YGR253C YHR212W-AP0CX91 67 aa5.79□□□□□ -1.48
PUP2YGR253C ERG3P32353 365 aa5.79□□□□□ -1.48
PUP2YGR253C RAD23P32628 398 aaKnown RBP5.79□□□□□ -1.48
PUP2YGR253C AVT6P40074 448 aa5.79□□□□□ -1.48
PUP2YGR253C WWM1P43582 211 aaKnown RBP5.79□□□□□ -1.48
PUP2YGR253C BUD25P85052 153 aa5.79□□□□□ -1.48
PUP2YGR253C HOR7Q05827 59 aa5.79□□□□□ -1.48
PUP2YGR253C TFC7Q12415 435 aa5.79□□□□□ -1.48
PUP2YGR253C MED11Q99278 115 aa5.79□□□□□ -1.48
PUP2YGR253C BUD23P25627 275 aaPredicted RBP5.78□□□□□ -1.48
PUP2YGR253C ARO7P32178 256 aa5.78□□□□□ -1.48
PUP2YGR253C YBR144CP34215 104 aa5.78□□□□□ -1.48
PUP2YGR253C SKP1P52286 194 aa5.78□□□□□ -1.48
PUP2YGR253C DOC1P53068 250 aa5.78□□□□□ -1.48
PUP2YGR253C YOS1Q3E834 85 aa5.78□□□□□ -1.48
PUP2YGR253C YEL009C-AA0A023PZF2 135 aa5.77□□□□□ -1.49
PUP2YGR253C GCN4P03069 281 aa5.77□□□□□ -1.49
PUP2YGR253C CDC31P06704 161 aaKnown RBP5.77□□□□□ -1.49
PUP2YGR253C RFA3P26755 122 aaKnown RBP5.77□□□□□ -1.49
PUP2YGR253C FLO5P38894 1075 aa5.77□□□□□ -1.49
PUP2YGR253C MSS2P40990 351 aa5.77□□□□□ -1.49
PUP2YGR253C GPI14P47088 403 aaKnown RBP5.77□□□□□ -1.49
PUP2YGR253C ILM1P47155 203 aa5.77□□□□□ -1.49
PUP2YGR253C CTF19Q02732 369 aa5.77□□□□□ -1.49
PUP2YGR253C YOL118CQ08259 102 aa5.77□□□□□ -1.49
PUP2YGR253C TIR4Q12218 487 aaPredicted RBP5.77□□□□□ -1.49
PUP2YGR253C VMA5P31412 392 aaKnown RBP5.76□□□□□ -1.49
PUP2YGR253C OCH1P31755 480 aa5.76□□□□□ -1.49
PUP2YGR253C SHE2P36068 246 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
PUP2YGR253C FLO10P36170 1169 aa5.76□□□□□ -1.49
PUP2YGR253C SSO2P39926 295 aa5.76□□□□□ -1.49
PUP2YGR253C YJL213WP40896 331 aa5.76□□□□□ -1.49
PUP2YGR253C YJL118WP47022 219 aa5.76□□□□□ -1.49
PUP2YGR253C BXI1P48558 297 aa5.76□□□□□ -1.49
PUP2YGR253C RPL9BP51401 191 aaKnown RBP5.76□□□□□ -1.49
PUP2YGR253C FMP48P53233 369 aa5.76□□□□□ -1.49
PUP2YGR253C RSM27P53305 110 aa5.76□□□□□ -1.49
PUP2YGR253C MCH1Q07376 486 aa5.76□□□□□ -1.49
PUP2YGR253C YPD1Q07688 167 aa5.76□□□□□ -1.49
PUP2YGR253C RBD2Q12270 262 aa5.76□□□□□ -1.49
PUP2YGR253C QCR7P00128 127 aa5.75□□□□□ -1.49
PUP2YGR253C REC104P33323 182 aa5.75□□□□□ -1.49
PUP2YGR253C YKL075CP36083 450 aa5.75□□□□□ -1.49
PUP2YGR253C YBR137WP38276 179 aa5.75□□□□□ -1.49
PUP2YGR253C MRPL13Q02204 264 aa5.75□□□□□ -1.49
PUP2YGR253C MAK3Q03503 176 aa5.75□□□□□ -1.49
PUP2YGR253C HNT1Q04344 158 aaKnown RBP5.75□□□□□ -1.49
PUP2YGR253C ALG6Q12001 544 aaKnown RBP5.75□□□□□ -1.49
PUP2YGR253C DGK1Q12382 290 aa5.75□□□□□ -1.49
PUP2YGR253C MET17P06106 444 aa5.74□□□□□ -1.49
PUP2YGR253C AGA2P32781 87 aa5.74□□□□□ -1.49
PUP2YGR253C UTP30P36144 274 aaKnown RBP5.74□□□□□ -1.49
PUP2YGR253C YHK8P38776 514 aa5.74□□□□□ -1.49
PUP2YGR253C PHM8P40025 321 aa5.74□□□□□ -1.49
PUP2YGR253C YAE1P47118 141 aaPredicted RBP5.74□□□□□ -1.49
PUP2YGR253C PRM3Q08931 133 aa5.74□□□□□ -1.49
PUP2YGR253C AEP3Q12089 606 aa5.74□□□□□ -1.49
PUP2YGR253C SWT1Q12104 458 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms