RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C AST1P35183 429 aa1.33□□□□□ -2.2
PRE4YFR050C YKL071WP36086 256 aa1.33□□□□□ -2.2
PRE4YFR050C GDT1P38301 280 aaPredicted RBP1.33□□□□□ -2.2
PRE4YFR050C MPC2P38857 129 aa1.33□□□□□ -2.2
PRE4YFR050C SEC28P40509 296 aaKnown RBP1.33□□□□□ -2.2
PRE4YFR050C HST4P53688 370 aa1.33□□□□□ -2.2
PRE4YFR050C SWP1Q02795 286 aa1.33□□□□□ -2.2
PRE4YFR050C YFH1Q07540 174 aa1.33□□□□□ -2.2
PRE4YFR050C FCY1Q12178 158 aa1.33□□□□□ -2.2
PRE4YFR050C TFB5Q3E7C1 72 aaPredicted RBP1.33□□□□□ -2.2
PRE4YFR050C FUS3P16892 353 aaKnown RBP1.32□□□□□ -2.2
PRE4YFR050C URA10P30402 227 aa1.32□□□□□ -2.2
PRE4YFR050C RAD23P32628 398 aaKnown RBP1.32□□□□□ -2.2
PRE4YFR050C VAM7P32912 316 aa1.32□□□□□ -2.2
PRE4YFR050C HAM1P47119 197 aaKnown RBP1.32□□□□□ -2.2
PRE4YFR050C LST7P53237 242 aa1.32□□□□□ -2.2
PRE4YFR050C SPP2Q02521 185 aa1.32□□□□□ -2.2
PRE4YFR050C SSQ1Q05931 657 aaPredicted RBP1.32□□□□□ -2.2
PRE4YFR050C YOL085CQ99345 113 aa1.32□□□□□ -2.2
PRE4YFR050C SUR1P33300 382 aa1.31□□□□□ -2.2
PRE4YFR050C RPC25P35718 212 aa1.31□□□□□ -2.2
PRE4YFR050C FLX1P40464 311 aa1.31□□□□□ -2.2
PRE4YFR050C YIL059CP40520 121 aa1.31□□□□□ -2.2
PRE4YFR050C PET191Q02772 108 aa1.31□□□□□ -2.2
PRE4YFR050C SMP3Q04174 516 aa1.31□□□□□ -2.2
PRE4YFR050C YDR114CQ04597 100 aa1.31□□□□□ -2.2
PRE4YFR050C YPR078CQ06813 372 aa1.31□□□□□ -2.2
PRE4YFR050C RRS1Q08746 203 aaKnown RBP1.31□□□□□ -2.2
PRE4YFR050C NIP7Q08962 181 aaKnown RBP1.31□□□□□ -2.2
PRE4YFR050C MHT1Q12525 324 aa1.31□□□□□ -2.2
PRE4YFR050C YHR214C-EQ8TGK0 99 aa1.31□□□□□ -2.2
PRE4YFR050C SEN2P16658 377 aa1.3□□□□□ -2.2
PRE4YFR050C SMI1P32566 505 aa1.3□□□□□ -2.2
PRE4YFR050C YHR180WP38868 163 aa1.3□□□□□ -2.2
PRE4YFR050C BDH1P39714 382 aa1.3□□□□□ -2.2
PRE4YFR050C LCP5P40079 357 aaPredicted RBP1.3□□□□□ -2.2
PRE4YFR050C BMT5P40493 336 aa1.3□□□□□ -2.2
PRE4YFR050C EFM3P47163 339 aa1.3□□□□□ -2.2
PRE4YFR050C YGL114WP53134 725 aa1.3□□□□□ -2.2
PRE4YFR050C DIA1P54005 336 aa1.3□□□□□ -2.2
PRE4YFR050C GOT1Q03554 138 aa1.3□□□□□ -2.2
PRE4YFR050C ARR2Q06597 130 aa1.3□□□□□ -2.2
PRE4YFR050C MCP1Q12106 302 aa1.3□□□□□ -2.2
PRE4YFR050C APC2Q12440 853 aa1.3□□□□□ -2.2
PRE4YFR050C YPL247CQ12523 523 aa1.3□□□□□ -2.2
PRE4YFR050C VPS63O13549 108 aa1.29□□□□□ -2.2
PRE4YFR050C YPR096CO13587 100 aa1.29□□□□□ -2.2
PRE4YFR050C GRX2P17695 143 aaKnown RBP1.29□□□□□ -2.2
PRE4YFR050C FAR1P21268 830 aa1.29□□□□□ -2.2
PRE4YFR050C HMX1P32339 317 aa1.29□□□□□ -2.2
PRE4YFR050C FRM2P37261 193 aa1.29□□□□□ -2.2
PRE4YFR050C ATG7P38862 630 aa1.29□□□□□ -2.2
PRE4YFR050C COG3P40094 801 aa1.29□□□□□ -2.2
PRE4YFR050C EOS1P53938 366 aa1.29□□□□□ -2.2
PRE4YFR050C VPS60Q03390 229 aa1.29□□□□□ -2.2
PRE4YFR050C SCS7Q03529 384 aa1.29□□□□□ -2.2
PRE4YFR050C YDR102CQ03864 110 aa1.29□□□□□ -2.2
PRE4YFR050C YDR278CQ05612 105 aa1.29□□□□□ -2.2
PRE4YFR050C YOL019WQ08157 551 aa1.29□□□□□ -2.2
PRE4YFR050C DFM1Q12743 341 aaKnown RBP1.29□□□□□ -2.2
PRE4YFR050C SIR2P06700 562 aa1.28□□□□□ -2.2
PRE4YFR050C RNA15P25299 296 aaPredicted RBP1.28□□□□□ -2.2
PRE4YFR050C PUP2P32379 260 aa1.28□□□□□ -2.2
PRE4YFR050C AGA2P32781 87 aa1.28□□□□□ -2.2
PRE4YFR050C ALK2P32789 676 aaPredicted RBP1.28□□□□□ -2.2
PRE4YFR050C PTC1P35182 281 aa1.28□□□□□ -2.2
PRE4YFR050C SMF2P38778 549 aa1.28□□□□□ -2.2
PRE4YFR050C AIM2P39721 246 aa1.28□□□□□ -2.2
PRE4YFR050C RPS29AP41057 56 aaKnown RBP1.28□□□□□ -2.2
PRE4YFR050C BAT2P47176 376 aaKnown RBP1.28□□□□□ -2.2
PRE4YFR050C NAS6P50086 228 aa1.28□□□□□ -2.2
PRE4YFR050C RCF2P53721 224 aa1.28□□□□□ -2.2
PRE4YFR050C COX12Q01519 83 aa1.28□□□□□ -2.2
PRE4YFR050C VTI1Q04338 217 aa1.28□□□□□ -2.2
PRE4YFR050C ERV41Q04651 352 aa1.28□□□□□ -2.2
PRE4YFR050C STE23Q06010 1027 aa1.28□□□□□ -2.2
PRE4YFR050C SPO77Q06134 477 aa1.28□□□□□ -2.2
PRE4YFR050C AIM45Q12480 344 aaKnown RBP1.28□□□□□ -2.2
PRE4YFR050C YLL053CP0CD98 152 aa1.27□□□□□ -2.21
PRE4YFR050C CPT1P17898 393 aa1.27□□□□□ -2.21
PRE4YFR050C COX10P21592 462 aa1.27□□□□□ -2.21
PRE4YFR050C DAD2P36162 133 aa1.27□□□□□ -2.21
PRE4YFR050C PRS4P38063 326 aaPredicted RBP1.27□□□□□ -2.21
PRE4YFR050C ADH5P38113 351 aaKnown RBP1.27□□□□□ -2.21
PRE4YFR050C IST2P38250 946 aa1.27□□□□□ -2.21
PRE4YFR050C SMB1P40018 196 aaKnown RBP1.27□□□□□ -2.21
PRE4YFR050C GTO1P48239 356 aa1.27□□□□□ -2.21
PRE4YFR050C RPS12P48589 143 aaKnown RBP1.27□□□□□ -2.21
PRE4YFR050C ASR1Q06834 288 aa1.27□□□□□ -2.21
PRE4YFR050C PHO85P17157 305 aa1.26□□□□□ -2.21
PRE4YFR050C PTM1P32857 523 aa1.26□□□□□ -2.21
PRE4YFR050C RPA34P47006 233 aaPredicted RBP1.26□□□□□ -2.21
PRE4YFR050C BOL2P53082 120 aa1.26□□□□□ -2.21
PRE4YFR050C HCH1P53834 153 aa1.26□□□□□ -2.21
PRE4YFR050C SMD1Q02260 146 aaPredicted RBP1.26□□□□□ -2.21
PRE4YFR050C RVB1Q03940 463 aaKnown RBP1.26□□□□□ -2.21
PRE4YFR050C YDR391CQ04170 232 aa1.26□□□□□ -2.21
PRE4YFR050C ATG39Q06159 398 aa1.26□□□□□ -2.21
PRE4YFR050C IRC19Q07843 230 aa1.26□□□□□ -2.21
PRE4YFR050C BTS1Q12051 335 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 50.8 ms