RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C SPC34P36131 295 aa3.1□□□□□ -1.91
OTU1YFL044C YCR041WP37265 110 aa3.1□□□□□ -1.91
OTU1YFL044C CTR2P38865 189 aa3.1□□□□□ -1.91
OTU1YFL044C SPO73P40031 143 aa3.1□□□□□ -1.91
OTU1YFL044C YER079WP40052 210 aaKnown RBP3.1□□□□□ -1.91
OTU1YFL044C HMS2P47175 358 aa3.1□□□□□ -1.91
OTU1YFL044C UFD1P53044 361 aa3.1□□□□□ -1.91
OTU1YFL044C RRN9P53437 365 aa3.1□□□□□ -1.91
OTU1YFL044C NUP49Q02199 472 aa3.1□□□□□ -1.91
OTU1YFL044C YPR098CQ06089 161 aa3.1□□□□□ -1.91
OTU1YFL044C ASA1Q06822 443 aa3.1□□□□□ -1.91
OTU1YFL044C USB1Q12208 290 aaKnown RBP3.1□□□□□ -1.91
OTU1YFL044C YLR108CQ12259 485 aa3.1□□□□□ -1.91
OTU1YFL044C ORT1Q12375 292 aa3.1□□□□□ -1.91
OTU1YFL044C YGR035W-AQ45U48 73 aa3.1□□□□□ -1.91
OTU1YFL044C TDH2P00358 332 aaKnown RBP3.09□□□□□ -1.91
OTU1YFL044C COX5BP00425 151 aa3.09□□□□□ -1.91
OTU1YFL044C PHO80P20052 293 aa3.09□□□□□ -1.91
OTU1YFL044C MEK1P24719 497 aaPredicted RBP3.09□□□□□ -1.91
OTU1YFL044C SUA7P29055 345 aaPredicted RBP3.09□□□□□ -1.91
OTU1YFL044C DEG1P31115 442 aaKnown RBP3.09□□□□□ -1.91
OTU1YFL044C VPS17P32913 551 aa3.09□□□□□ -1.91
OTU1YFL044C MCH2P36032 473 aa3.09□□□□□ -1.91
OTU1YFL044C ECM8P38246 354 aa3.09□□□□□ -1.91
OTU1YFL044C FZO1P38297 855 aa3.09□□□□□ -1.91
OTU1YFL044C ARC40P38328 384 aaKnown RBP3.09□□□□□ -1.91
OTU1YFL044C RPS20P38701 121 aaKnown RBP3.09□□□□□ -1.91
OTU1YFL044C CHL4P38907 458 aa3.09□□□□□ -1.91
OTU1YFL044C MAM33P40513 266 aa3.09□□□□□ -1.91
OTU1YFL044C CIN2P46670 268 aa3.09□□□□□ -1.91
OTU1YFL044C YIP1P53039 248 aa3.09□□□□□ -1.91
OTU1YFL044C PRM8P53174 237 aa3.09□□□□□ -1.91
OTU1YFL044C GPI15P53961 229 aa3.09□□□□□ -1.91
OTU1YFL044C STD1Q02794 444 aa3.09□□□□□ -1.91
OTU1YFL044C GPI17Q04080 534 aa3.09□□□□□ -1.91
OTU1YFL044C ELP6Q04868 273 aa3.09□□□□□ -1.91
OTU1YFL044C SPC2Q04969 178 aa3.09□□□□□ -1.91
OTU1YFL044C MSC3Q05812 728 aa3.09□□□□□ -1.91
OTU1YFL044C PEX27Q08580 376 aa3.09□□□□□ -1.91
OTU1YFL044C SRL1Q08673 210 aa3.09□□□□□ -1.91
OTU1YFL044C RPS8AP0CX39 200 aaKnown RBP3.08□□□□□ -1.92
OTU1YFL044C RPS8BP0CX40 200 aaKnown RBP3.08□□□□□ -1.92
OTU1YFL044C STE18P18852 110 aa3.08□□□□□ -1.92
OTU1YFL044C MRPS28P21771 286 aa3.08□□□□□ -1.92
OTU1YFL044C HXT2P23585 541 aa3.08□□□□□ -1.92
OTU1YFL044C PCL1P24867 279 aa3.08□□□□□ -1.92
OTU1YFL044C MRPL6P32904 214 aa3.08□□□□□ -1.92
OTU1YFL044C FIG1P38224 298 aa3.08□□□□□ -1.92
OTU1YFL044C RTC2P38279 296 aa3.08□□□□□ -1.92
OTU1YFL044C AIM20P40451 204 aa3.08□□□□□ -1.92
OTU1YFL044C SFH5P47008 294 aa3.08□□□□□ -1.92
OTU1YFL044C PMT5P52867 743 aa3.08□□□□□ -1.92
OTU1YFL044C COS10P52924 374 aa3.08□□□□□ -1.92
OTU1YFL044C APJ1P53940 528 aa3.08□□□□□ -1.92
OTU1YFL044C SPC24Q04477 213 aa3.08□□□□□ -1.92
OTU1YFL044C YMR254CQ04838 102 aa3.08□□□□□ -1.92
OTU1YFL044C IRC25Q07951 179 aa3.08□□□□□ -1.92
OTU1YFL044C ADF1Q2V2Q1 113 aa3.08□□□□□ -1.92
OTU1YFL044C RPL12AP0CX53 165 aaKnown RBP3.07□□□□□ -1.92
OTU1YFL044C RPL12BP0CX54 165 aa3.07□□□□□ -1.92
OTU1YFL044C SSO2P39926 295 aa3.07□□□□□ -1.92
OTU1YFL044C RMD6P39975 231 aa3.07□□□□□ -1.92
OTU1YFL044C SLM1P40485 686 aa3.07□□□□□ -1.92
OTU1YFL044C AGP3P43548 558 aa3.07□□□□□ -1.92
OTU1YFL044C FAR7P43592 221 aa3.07□□□□□ -1.92
OTU1YFL044C TMA22P47089 198 aaPredicted RBP3.07□□□□□ -1.92
OTU1YFL044C XPT1P47165 209 aa3.07□□□□□ -1.92
OTU1YFL044C YDL186WP48568 277 aa3.07□□□□□ -1.92
OTU1YFL044C NSA1P53136 463 aaPredicted RBP3.07□□□□□ -1.92
OTU1YFL044C YNR048WP53740 393 aa3.07□□□□□ -1.92
OTU1YFL044C OST6Q03723 332 aa3.07□□□□□ -1.92
OTU1YFL044C MRX8Q05473 314 aa3.07□□□□□ -1.92
OTU1YFL044C ARR2Q06597 130 aa3.07□□□□□ -1.92
OTU1YFL044C RFU1Q08003 200 aa3.07□□□□□ -1.92
OTU1YFL044C YDL009CQ12210 107 aa3.07□□□□□ -1.92
OTU1YFL044C RIB3Q99258 208 aa3.07□□□□□ -1.92
OTU1YFL044C RPL30P14120 105 aaKnown RBP3.06□□□□□ -1.92
OTU1YFL044C YCR022CP25620 114 aa3.06□□□□□ -1.92
OTU1YFL044C FRM2P37261 193 aa3.06□□□□□ -1.92
OTU1YFL044C SBE22P38814 852 aa3.06□□□□□ -1.92
OTU1YFL044C IPT1P38954 527 aa3.06□□□□□ -1.92
OTU1YFL044C SNL1P40548 159 aa3.06□□□□□ -1.92
OTU1YFL044C GON7P46984 123 aa3.06□□□□□ -1.92
OTU1YFL044C CCC1P47818 322 aa3.06□□□□□ -1.92
OTU1YFL044C NQM1P53228 333 aaPredicted RBP3.06□□□□□ -1.92
OTU1YFL044C WSC2P53832 503 aa3.06□□□□□ -1.92
OTU1YFL044C PGA1P53896 198 aa3.06□□□□□ -1.92
OTU1YFL044C YPL067CQ02754 198 aa3.06□□□□□ -1.92
OTU1YFL044C YDR248CQ03786 193 aa3.06□□□□□ -1.92
OTU1YFL044C UTP15Q04305 513 aaKnown RBP3.06□□□□□ -1.92
OTU1YFL044C YLR281CQ05863 155 aa3.06□□□□□ -1.92
OTU1YFL044C VIK1Q12045 647 aa3.06□□□□□ -1.92
OTU1YFL044C FCY22Q12119 530 aa3.06□□□□□ -1.92
OTU1YFL044C YLR126CQ12288 251 aa3.06□□□□□ -1.92
OTU1YFL044C MRPL23Q12487 163 aaPredicted RBP3.06□□□□□ -1.92
OTU1YFL044C YMR105W-AQ8TGS8 64 aa3.06□□□□□ -1.92
OTU1YFL044C PEX32P38292 413 aa3.05□□□□□ -1.92
OTU1YFL044C CUE1P38428 203 aa3.05□□□□□ -1.92
OTU1YFL044C RRG9P40156 214 aa3.05□□□□□ -1.92
OTU1YFL044C AGE2P40529 298 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms