RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YJR056CP47115 236 aa2.07□□□□□ -2.08
SEC4YFL005W ABF2Q02486 183 aa2.07□□□□□ -2.08
SEC4YFL005W NIP7Q08962 181 aaKnown RBP2.07□□□□□ -2.08
SEC4YFL005W YOR283WQ12040 230 aaKnown RBP2.07□□□□□ -2.08
SEC4YFL005W URA6P15700 204 aa2.06□□□□□ -2.08
SEC4YFL005W FCY2P17064 533 aa2.06□□□□□ -2.08
SEC4YFL005W COQ1P18900 473 aa2.06□□□□□ -2.08
SEC4YFL005W ARC19P33204 171 aaKnown RBP2.06□□□□□ -2.08
SEC4YFL005W SIP3P38717 1229 aa2.06□□□□□ -2.08
SEC4YFL005W RSM25P40496 264 aa2.06□□□□□ -2.08
SEC4YFL005W ERV29P53337 310 aa2.06□□□□□ -2.08
SEC4YFL005W DID2P69771 204 aa2.06□□□□□ -2.08
SEC4YFL005W CGI121Q03705 181 aaKnown RBP2.06□□□□□ -2.08
SEC4YFL005W SSQ1Q05931 657 aaPredicted RBP2.06□□□□□ -2.08
SEC4YFL005W ATG39Q06159 398 aa2.06□□□□□ -2.08
SEC4YFL005W HEM25Q07534 307 aa2.06□□□□□ -2.08
SEC4YFL005W AKR2Q12013 749 aa2.06□□□□□ -2.08
SEC4YFL005W DCN1Q12395 269 aa2.06□□□□□ -2.08
SEC4YFL005W MHT1Q12525 324 aa2.06□□□□□ -2.08
SEC4YFL005W YKL183C-AQ3E765 70 aa2.06□□□□□ -2.08
SEC4YFL005W SIR4P11978 1358 aa2.06□□□□□ -2.08
SEC4YFL005W YHR139C-AO13536 103 aa2.05□□□□□ -2.08
SEC4YFL005W STE18P18852 110 aa2.05□□□□□ -2.08
SEC4YFL005W VMA11P32842 164 aa2.05□□□□□ -2.08
SEC4YFL005W YBR063CP38083 404 aa2.05□□□□□ -2.08
SEC4YFL005W ECM33P38248 429 aaKnown RBP2.05□□□□□ -2.08
SEC4YFL005W GRE3P38715 327 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SEC4YFL005W CTR2P38865 189 aa2.05□□□□□ -2.08
SEC4YFL005W YAR068WP39564 161 aa2.05□□□□□ -2.08
SEC4YFL005W YER034WP40022 185 aaKnown RBP2.05□□□□□ -2.08
SEC4YFL005W ERG28P40030 148 aa2.05□□□□□ -2.08
SEC4YFL005W NUP57P48837 541 aa2.05□□□□□ -2.08
SEC4YFL005W BRR6P53062 197 aa2.05□□□□□ -2.08
SEC4YFL005W ALG13P53178 202 aa2.05□□□□□ -2.08
SEC4YFL005W BNA7Q04066 261 aa2.05□□□□□ -2.08
SEC4YFL005W LSO2Q3E772 92 aaKnown RBP2.05□□□□□ -2.08
SEC4YFL005W RPL28P02406 149 aaKnown RBP2.04□□□□□ -2.08
SEC4YFL005W ARG80P07249 177 aa2.04□□□□□ -2.08
SEC4YFL005W PUT1P09368 476 aa2.04□□□□□ -2.08
SEC4YFL005W SRY1P36007 326 aa2.04□□□□□ -2.08
SEC4YFL005W YOR062CP36025 268 aa2.04□□□□□ -2.08
SEC4YFL005W YRB2P40517 327 aa2.04□□□□□ -2.08
SEC4YFL005W RAD17P48581 401 aa2.04□□□□□ -2.08
SEC4YFL005W PRM15Q03262 622 aa2.04□□□□□ -2.08
SEC4YFL005W YMR226CQ05016 267 aaKnown RBP2.04□□□□□ -2.08
SEC4YFL005W RPL9AP05738 191 aaKnown RBP2.03□□□□□ -2.08
SEC4YFL005W PRP18P33411 251 aaPredicted RBP2.03□□□□□ -2.08
SEC4YFL005W CBT1P36038 271 aaPredicted RBP2.03□□□□□ -2.08
SEC4YFL005W DOG1P38774 246 aa2.03□□□□□ -2.08
SEC4YFL005W RPL9BP51401 191 aaKnown RBP2.03□□□□□ -2.08
SEC4YFL005W MGA1P53050 456 aa2.03□□□□□ -2.08
SEC4YFL005W HOP2P53187 214 aa2.03□□□□□ -2.08
SEC4YFL005W EFM5P53200 248 aaKnown RBP2.03□□□□□ -2.08
SEC4YFL005W MRPS17Q03246 237 aaPredicted RBP2.03□□□□□ -2.08
SEC4YFL005W YMD8Q03697 442 aa2.03□□□□□ -2.08
SEC4YFL005W GIS3Q12418 502 aa2.03□□□□□ -2.08
SEC4YFL005W DRS2P39524 1355 aa2.02□□□□□ -2.09
SEC4YFL005W CDC28P00546 298 aaKnown RBP2.02□□□□□ -2.09
SEC4YFL005W CDC33P07260 213 aaKnown RBP2.02□□□□□ -2.09
SEC4YFL005W GRX2P17695 143 aaKnown RBP2.02□□□□□ -2.09
SEC4YFL005W DOG2P38773 246 aa2.02□□□□□ -2.09
SEC4YFL005W YNL194CP40169 301 aa2.02□□□□□ -2.09
SEC4YFL005W DAN1P47178 298 aa2.02□□□□□ -2.09
SEC4YFL005W YNL010WP53981 241 aaKnown RBP2.02□□□□□ -2.09
SEC4YFL005W JLP1Q12358 412 aa2.02□□□□□ -2.09
SEC4YFL005W MSW1P04803 379 aa2.01□□□□□ -2.09
SEC4YFL005W CDC36P06100 191 aaPredicted RBP2.01□□□□□ -2.09
SEC4YFL005W ASF2P32448 525 aaPredicted RBP2.01□□□□□ -2.09
SEC4YFL005W MGM101P32787 269 aaKnown RBP2.01□□□□□ -2.09
SEC4YFL005W PRX1P34227 261 aaKnown RBP2.01□□□□□ -2.09
SEC4YFL005W IRC22P40006 225 aa2.01□□□□□ -2.09
SEC4YFL005W YIL001WP40560 513 aa2.01□□□□□ -2.09
SEC4YFL005W FAR7P43592 221 aa2.01□□□□□ -2.09
SEC4YFL005W ADO1P47143 340 aaKnown RBP2.01□□□□□ -2.09
SEC4YFL005W BXI1P48558 297 aa2.01□□□□□ -2.09
SEC4YFL005W DAD3P69850 94 aa2.01□□□□□ -2.09
SEC4YFL005W YDR248CQ03786 193 aa2.01□□□□□ -2.09
SEC4YFL005W GET4Q12125 312 aa2.01□□□□□ -2.09
SEC4YFL005W ATO3Q12359 275 aa2.01□□□□□ -2.09
SEC4YFL005W CMC2Q3E7A4 109 aa2.01□□□□□ -2.09
SEC4YFL005W YDR157WA0A023PZE8 133 aa2□□□□□ -2.09
SEC4YFL005W DBF2P22204 572 aa2□□□□□ -2.09
SEC4YFL005W VPS51P36116 164 aa2□□□□□ -2.09
SEC4YFL005W ECM4P36156 370 aa2□□□□□ -2.09
SEC4YFL005W RFC4P40339 323 aaKnown RBP2□□□□□ -2.09
SEC4YFL005W IRC18P47056 224 aa2□□□□□ -2.09
SEC4YFL005W CWC23P52868 283 aaPredicted RBP2□□□□□ -2.09
SEC4YFL005W PRM8P53174 237 aa2□□□□□ -2.09
SEC4YFL005W YGR219WP53307 113 aa2□□□□□ -2.09
SEC4YFL005W SNZ1Q03148 297 aa2□□□□□ -2.09
SEC4YFL005W ARR2Q06597 130 aa2□□□□□ -2.09
SEC4YFL005W JIP3O13555 125 aa1.99□□□□□ -2.09
SEC4YFL005W CDC8P00572 216 aa1.99□□□□□ -2.09
SEC4YFL005W RPL27AP0C2H6 136 aaKnown RBP1.99□□□□□ -2.09
SEC4YFL005W RPL27BP0C2H7 136 aaKnown RBP1.99□□□□□ -2.09
SEC4YFL005W YPR170W-BP0C5R9 85 aa1.99□□□□□ -2.09
SEC4YFL005W MDH3P32419 343 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SEC4YFL005W APS1P35181 156 aa1.99□□□□□ -2.09
SEC4YFL005W NRG2P38082 220 aa1.99□□□□□ -2.09
SEC4YFL005W YNL247WP53852 767 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms