RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	YCR061W	P25639	631 aa		7.64	□□□□□ -1.19
LSM5	YER146W	MRP17	P28778	131 aa		7.64	□□□□□ -1.19
LSM5	YER146W	MCH2	P36032	473 aa		7.64	□□□□□ -1.19
LSM5	YER146W	YPC1	P38298	316 aa		7.64	□□□□□ -1.19
LSM5	YER146W	GPI16	P38875	610 aa		7.64	□□□□□ -1.19
LSM5	YER146W	MID1	P41821	548 aa		7.64	□□□□□ -1.19
LSM5	YER146W	GNA1	P43577	159 aa	Predicted RBP	7.64	□□□□□ -1.19
LSM5	YER146W	MRL1	Q06815	381 aa		7.64	□□□□□ -1.19
LSM5	YER146W	RRS1	Q08746	203 aa	Known RBP	7.64	□□□□□ -1.19
LSM5	YER146W	COX17	Q12287	69 aa		7.64	□□□□□ -1.19
LSM5	YER146W	TY1A-DR3	Q12441	440 aa		7.64	□□□□□ -1.19
LSM5	YER146W	CDC39	P25655	2108 aa	Known RBP	7.63	□□□□□ -1.19
LSM5	YER146W	GAL1	P04385	528 aa		7.63	□□□□□ -1.19
LSM5	YER146W	SPS4	P09937	338 aa		7.63	□□□□□ -1.19
LSM5	YER146W	APA2	P22108	325 aa		7.63	□□□□□ -1.19
LSM5	YER146W	EMP24	P32803	203 aa	Known RBP	7.63	□□□□□ -1.19
LSM5	YER146W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	7.63	□□□□□ -1.19	not detected
LSM5	YER146W	YIL024C	P40543	189 aa		7.63	□□□□□ -1.19
LSM5	YER146W	ODC1	Q03028	310 aa		7.63	□□□□□ -1.19
LSM5	YER146W	CRR1	Q05790	422 aa		7.63	□□□□□ -1.19
LSM5	YER146W	MSI1	P13712	422 aa		7.62	□□□□□ -1.19
LSM5	YER146W	MAK32	P23060	363 aa		7.62	□□□□□ -1.19
LSM5	YER146W	YCR101C	P25607	182 aa		7.62	□□□□□ -1.19
LSM5	YER146W	CLB6	P32943	380 aa		7.62	□□□□□ -1.19
LSM5	YER146W	IMD2	P38697	523 aa	Known RBP	7.62	□□□□□ -1.19
LSM5	YER146W	IKI1	P38874	309 aa		7.62	□□□□□ -1.19
LSM5	YER146W	CCS1	P40202	249 aa	Known RBP	7.62	□□□□□ -1.19
LSM5	YER146W	EGT2	P42835	1041 aa		7.62	□□□□□ -1.19
LSM5	YER146W	TAD2	P47058	250 aa		7.62	□□□□□ -1.19
LSM5	YER146W	UFD1	P53044	361 aa		7.62	□□□□□ -1.19
LSM5	YER146W	NIF3	P53081	288 aa		7.62	□□□□□ -1.19
LSM5	YER146W	YPR098C	Q06089	161 aa		7.62	□□□□□ -1.19
LSM5	YER146W	ANT1	Q06497	328 aa		7.62	□□□□□ -1.19
LSM5	YER146W	DGK1	Q12382	290 aa		7.62	□□□□□ -1.19
LSM5	YER146W	PCC1	Q3E833	88 aa		7.62	□□□□□ -1.19
LSM5	YER146W	MEC1	P38111	2368 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YBL010C	P32788	280 aa		7.61	□□□□□ -1.19
LSM5	YER146W	FAT1	P38225	669 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YBR197C	P38306	217 aa		7.61	□□□□□ -1.19
LSM5	YER146W	LNP1	P38878	278 aa		7.61	□□□□□ -1.19
LSM5	YER146W	FLX1	P40464	311 aa		7.61	□□□□□ -1.19
LSM5	YER146W	PRM5	P40476	318 aa		7.61	□□□□□ -1.19
LSM5	YER146W	BMT5	P40493	336 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YIL029C	P40538	142 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YFL051C	P43552	160 aa		7.61	□□□□□ -1.19
LSM5	YER146W	SNN1	P48232	102 aa		7.61	□□□□□ -1.19
LSM5	YER146W	ARG5,6	Q01217	863 aa		7.61	□□□□□ -1.19
LSM5	YER146W	ACS1	Q01574	713 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YDC1	Q02896	317 aa		7.61	□□□□□ -1.19
LSM5	YER146W	NRG1	Q03125	231 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YML018C	Q03730	393 aa		7.61	□□□□□ -1.19
LSM5	YER146W	PIN3	Q06449	215 aa		7.61	□□□□□ -1.19
LSM5	YER146W	ZEO1	Q08245	113 aa		7.61	□□□□□ -1.19
LSM5	YER146W	YOR186W	Q08560	144 aa		7.61	□□□□□ -1.19
LSM5	YER146W	NCE102	Q12207	173 aa	RIP-Chip data	7.61	□□□□□ -1.19	not detected
LSM5	YER146W	ERP4	Q12450	207 aa		7.61	□□□□□ -1.19
LSM5	YER146W	ISN1	Q99312	450 aa		7.61	□□□□□ -1.19
LSM5	YER146W	RPL35A	P0CX84	120 aa	Known RBP	7.6	□□□□□ -1.19
LSM5	YER146W	RPL35B	P0CX85	120 aa	Known RBP	7.6	□□□□□ -1.19
LSM5	YER146W	MIR1	P23641	311 aa	Known RBP	7.6	□□□□□ -1.19
LSM5	YER146W	ERG3	P32353	365 aa		7.6	□□□□□ -1.19
LSM5	YER146W	GLC7	P32598	312 aa	Known RBP	7.6	□□□□□ -1.19
LSM5	YER146W	YOX1	P34161	385 aa		7.6	□□□□□ -1.19
LSM5	YER146W	PAN3	P36102	679 aa	Predicted RBP	7.6	□□□□□ -1.19
LSM5	YER146W	CDS1	P38221	457 aa		7.6	□□□□□ -1.19
LSM5	YER146W	ARO9	P38840	513 aa	Predicted RBP	7.6	□□□□□ -1.19
LSM5	YER146W	YER079W	P40052	210 aa	Known RBP	7.6	□□□□□ -1.19
LSM5	YER146W	OKP1	P53298	406 aa		7.6	□□□□□ -1.19
LSM5	YER146W	YDL086W	Q07505	273 aa		7.6	□□□□□ -1.19
LSM5	YER146W	SCP1	Q08873	200 aa		7.6	□□□□□ -1.19
LSM5	YER146W	VMA9	Q3E7B6	73 aa		7.6	□□□□□ -1.19
LSM5	YER146W	YKL162C	P36052	402 aa		7.59	□□□□□ -1.19
LSM5	YER146W	PGD1	P40356	397 aa		7.59	□□□□□ -1.19
LSM5	YER146W	YPR063C	Q12160	140 aa		7.59	□□□□□ -1.19
LSM5	YER146W	PRS5	Q12265	496 aa	Known RBP	7.59	□□□□□ -1.19
LSM5	YER146W	MPD1	Q12404	318 aa	Known RBP	7.59	□□□□□ -1.19
LSM5	YER146W	YLR365W	Q7LIF2	110 aa		7.59	□□□□□ -1.19
LSM5	YER146W	VMA3	P25515	160 aa		7.58	□□□□□ -1.2
LSM5	YER146W	OCH1	P31755	480 aa		7.58	□□□□□ -1.2
LSM5	YER146W	POP8	P38208	133 aa		7.58	□□□□□ -1.2
LSM5	YER146W	PRS2	P38620	318 aa	Known RBP	7.58	□□□□□ -1.2
LSM5	YER146W	POP2	P39008	433 aa		7.58	□□□□□ -1.2
LSM5	YER146W	GCV3	P39726	170 aa	Predicted RBP	7.58	□□□□□ -1.2
LSM5	YER146W	PIG2	P40187	538 aa		7.58	□□□□□ -1.2
LSM5	YER146W	MRX5	P47007	382 aa		7.58	□□□□□ -1.2
LSM5	YER146W	YJR011C	P47086	261 aa	Predicted RBP	7.58	□□□□□ -1.2
LSM5	YER146W	MOG1	P47123	218 aa		7.58	□□□□□ -1.2
LSM5	YER146W	MCM22	P47167	239 aa		7.58	□□□□□ -1.2
LSM5	YER146W	PHO23	P50947	330 aa		7.58	□□□□□ -1.2
LSM5	YER146W	ERV25	P54837	211 aa	Known RBP	7.58	□□□□□ -1.2
LSM5	YER146W	YDR248C	Q03786	193 aa		7.58	□□□□□ -1.2
LSM5	YER146W	GRC3	Q07845	632 aa		7.58	□□□□□ -1.2
LSM5	YER146W	MED4	Q12343	284 aa		7.58	□□□□□ -1.2
LSM5	YER146W	EAF3	Q12432	401 aa		7.58	□□□□□ -1.2
LSM5	YER146W	PRM4	Q12498	284 aa		7.58	□□□□□ -1.2
LSM5	YER146W	CMC2	Q3E7A4	109 aa		7.58	□□□□□ -1.2
LSM5	YER146W	HBN1	Q96VH4	193 aa		7.58	□□□□□ -1.2
LSM5	YER146W	UBA3	Q99344	299 aa		7.58	□□□□□ -1.2
LSM5	YER146W	TY1A-DR4	O74302	440 aa		7.57	□□□□□ -1.2
LSM5	YER146W	RPL25	P04456	142 aa	Known RBP	7.57	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms