RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SWC4P53201 476 aa2.95□□□□□ -1.94
SIZ1YDR409W VHT1P53241 593 aa2.95□□□□□ -1.94
SIZ1YDR409W GPI15P53961 229 aa2.95□□□□□ -1.94
SIZ1YDR409W PIR1Q03178 341 aa2.95□□□□□ -1.94
SIZ1YDR409W YMR166CQ03829 368 aa2.95□□□□□ -1.94
SIZ1YDR409W SEC13Q04491 297 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W YMR253CQ04835 414 aa2.95□□□□□ -1.94
SIZ1YDR409W YOR387CQ08910 206 aa2.95□□□□□ -1.94
SIZ1YDR409W ERG27Q12452 347 aaKnown RBP2.95□□□□□ -1.94
SIZ1YDR409W YCR100CP25606 316 aa2.94□□□□□ -1.94
SIZ1YDR409W PAD1P33751 242 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SIZ1YDR409W TSA1P34760 196 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W KAE1P36132 386 aa2.94□□□□□ -1.94
SIZ1YDR409W YBR096WP38256 230 aa2.94□□□□□ -1.94
SIZ1YDR409W ANS1P38832 159 aa2.94□□□□□ -1.94
SIZ1YDR409W EMC5P40540 141 aa2.94□□□□□ -1.94
SIZ1YDR409W UFE1P41834 346 aa2.94□□□□□ -1.94
SIZ1YDR409W YGL101WP53144 215 aa2.94□□□□□ -1.94
SIZ1YDR409W YNR062CP53748 327 aa2.94□□□□□ -1.94
SIZ1YDR409W APJ1P53940 528 aa2.94□□□□□ -1.94
SIZ1YDR409W SMX3P54999 86 aaPredicted RBP2.94□□□□□ -1.94
SIZ1YDR409W MRP51Q02950 344 aa2.94□□□□□ -1.94
SIZ1YDR409W YMR310CQ04867 317 aaPredicted RBP2.94□□□□□ -1.94
SIZ1YDR409W YMR315WQ04869 349 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W YPR114WQ06107 315 aa2.94□□□□□ -1.94
SIZ1YDR409W BER1Q06688 274 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W MED7Q08278 222 aa2.94□□□□□ -1.94
SIZ1YDR409W PRM4Q12498 284 aa2.94□□□□□ -1.94
SIZ1YDR409W ADK1P07170 222 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W UBI4P0CG63 381 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W RPL40AP0CH08 128 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W RPL40BP0CH09 128 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W SAC7P17121 654 aa2.94□□□□□ -1.94
SIZ1YDR409W SEC59P20048 519 aa2.94□□□□□ -1.94
SIZ1YDR409W SCL1P21243 252 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W PUT3P25502 979 aaPredicted RBP2.94□□□□□ -1.94
SIZ1YDR409W MXR2P25566 168 aa2.94□□□□□ -1.94
SIZ1YDR409W MRPL27P36526 146 aaPredicted RBP2.94□□□□□ -1.94
SIZ1YDR409W YPT31P38555 223 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W INM1P38710 295 aa2.94□□□□□ -1.94
SIZ1YDR409W TVP23P38962 199 aa2.94□□□□□ -1.94
SIZ1YDR409W PRP39P39682 629 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W YIL060WP40519 144 aa2.94□□□□□ -1.94
SIZ1YDR409W LSB3P43603 459 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W NUP53Q03790 475 aa2.94□□□□□ -1.94
SIZ1YDR409W FIT1Q04433 528 aa2.94□□□□□ -1.94
SIZ1YDR409W NMA1Q06178 401 aaKnown RBP2.94□□□□□ -1.94
SIZ1YDR409W OPI3P05375 206 aa2.93□□□□□ -1.94
SIZ1YDR409W KIN28P06242 306 aa2.93□□□□□ -1.94
SIZ1YDR409W VMA16P23968 213 aa2.93□□□□□ -1.94
SIZ1YDR409W CPR4P25334 318 aa2.93□□□□□ -1.94
SIZ1YDR409W YEF1P32622 495 aa2.93□□□□□ -1.94
SIZ1YDR409W ECM15P35195 104 aa2.93□□□□□ -1.94
SIZ1YDR409W PAU15P40585 124 aa2.93□□□□□ -1.94
SIZ1YDR409W YFL015CP43578 164 aa2.93□□□□□ -1.94
SIZ1YDR409W UBX6P47049 396 aa2.93□□□□□ -1.94
SIZ1YDR409W YJR141WP47172 347 aaPredicted RBP2.93□□□□□ -1.94
SIZ1YDR409W YGL204CP53089 101 aa2.93□□□□□ -1.94
SIZ1YDR409W RSM27P53305 110 aa2.93□□□□□ -1.94
SIZ1YDR409W RHO4Q00246 291 aa2.93□□□□□ -1.94
SIZ1YDR409W CTF19Q02732 369 aa2.93□□□□□ -1.94
SIZ1YDR409W CUE4Q04201 117 aaPredicted RBP2.93□□□□□ -1.94
SIZ1YDR409W SNA4Q07549 140 aa2.93□□□□□ -1.94
SIZ1YDR409W PAM18Q07914 168 aa2.93□□□□□ -1.94
SIZ1YDR409W YDL177CQ12257 170 aa2.93□□□□□ -1.94
SIZ1YDR409W YLR118CQ12354 227 aa2.93□□□□□ -1.94
SIZ1YDR409W GAL4P04386 881 aa2.93□□□□□ -1.94
SIZ1YDR409W HIS5P07172 385 aa2.93□□□□□ -1.94
SIZ1YDR409W TIP1P27654 210 aaPredicted RBP2.93□□□□□ -1.94
SIZ1YDR409W FUN19P28003 413 aaPredicted RBP2.93□□□□□ -1.94
SIZ1YDR409W TRR1P29509 319 aaKnown RBP2.93□□□□□ -1.94
SIZ1YDR409W SNC2P33328 115 aa2.93□□□□□ -1.94
SIZ1YDR409W YNK1P36010 153 aaKnown RBP2.93□□□□□ -1.94
SIZ1YDR409W SMB1P40018 196 aaKnown RBP2.93□□□□□ -1.94
SIZ1YDR409W YGR042WP53227 271 aa2.93□□□□□ -1.94
SIZ1YDR409W BSP1Q06604 576 aa2.93□□□□□ -1.94
SIZ1YDR409W YDL218WQ07629 317 aa2.93□□□□□ -1.94
SIZ1YDR409W ATX2Q12067 313 aa2.93□□□□□ -1.94
SIZ1YDR409W COX19Q3E731 98 aa2.93□□□□□ -1.94
SIZ1YDR409W ADH3P07246 375 aaKnown RBP2.92□□□□□ -1.94
SIZ1YDR409W NRP1P32770 719 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
SIZ1YDR409W NTF2P33331 125 aaKnown RBP2.92□□□□□ -1.94
SIZ1YDR409W ELF1P36053 145 aa2.92□□□□□ -1.94
SIZ1YDR409W SDS24P38314 527 aa2.92□□□□□ -1.94
SIZ1YDR409W YPT35P38815 214 aaKnown RBP2.92□□□□□ -1.94
SIZ1YDR409W SPC25P40014 221 aa2.92□□□□□ -1.94
SIZ1YDR409W HIT1P46973 164 aa2.92□□□□□ -1.94
SIZ1YDR409W COG7P53195 279 aa2.92□□□□□ -1.94
SIZ1YDR409W SLX9P53251 210 aaPredicted RBP2.92□□□□□ -1.94
SIZ1YDR409W CTL1Q03220 320 aaKnown RBP2.92□□□□□ -1.94
SIZ1YDR409W SEN15Q04675 128 aa2.92□□□□□ -1.94
SIZ1YDR409W CTR3Q06686 241 aa2.92□□□□□ -1.94
SIZ1YDR409W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
SIZ1YDR409W MAK32P23060 363 aa2.92□□□□□ -1.94
SIZ1YDR409W YSR3P23501 404 aa2.92□□□□□ -1.94
SIZ1YDR409W SGE1P33335 543 aa2.92□□□□□ -1.94
SIZ1YDR409W YKR041WP36134 250 aa2.92□□□□□ -1.94
SIZ1YDR409W MRPL28P36527 147 aa2.92□□□□□ -1.94
SIZ1YDR409W POP8P38208 133 aa2.92□□□□□ -1.94
SIZ1YDR409W SHG1P38337 142 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms