RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C SPG4Q04438 115 aa1.11□□□□□ -2.23
UFD2YDL190C RRP40Q08285 240 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C YLR126CQ12288 251 aa1.11□□□□□ -2.23
UFD2YDL190C ATG5Q12380 294 aa1.11□□□□□ -2.23
UFD2YDL190C COS2P0CX12 379 aa1.11□□□□□ -2.23
UFD2YDL190C COS3P0CX13 379 aa1.11□□□□□ -2.23
UFD2YDL190C CPT1P17898 393 aa1.11□□□□□ -2.23
UFD2YDL190C CKA2P19454 339 aa1.11□□□□□ -2.23
UFD2YDL190C PRE7P23724 241 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C CDC10P25342 322 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C MRPL39P36533 70 aa1.11□□□□□ -2.23
UFD2YDL190C YNL194CP40169 301 aa1.11□□□□□ -2.23
UFD2YDL190C COS4P43542 379 aa1.11□□□□□ -2.23
UFD2YDL190C CPR7P47103 393 aa1.11□□□□□ -2.23
UFD2YDL190C HAM1P47119 197 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C CUS2P53830 285 aaPredicted RBP1.11□□□□□ -2.23
UFD2YDL190C YMR226CQ05016 267 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C YRA1Q12159 226 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C NCB2Q92317 146 aa1.11□□□□□ -2.23
UFD2YDL190C IKI3Q06706 1349 aaKnown RBP1.11□□□□□ -2.23
UFD2YDL190C SOD1P00445 154 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C MATALPHA2P0CY08 210 aa1.1□□□□□ -2.23
UFD2YDL190C HMLALPHA2P0CY09 210 aa1.1□□□□□ -2.23
UFD2YDL190C CSG2P35206 410 aa1.1□□□□□ -2.23
UFD2YDL190C PRE6P40303 254 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C CWC23P52868 283 aaPredicted RBP1.1□□□□□ -2.23
UFD2YDL190C RMR1P53060 241 aa1.1□□□□□ -2.23
UFD2YDL190C MRH4P53166 561 aa1.1□□□□□ -2.23
UFD2YDL190C GOT1Q03554 138 aa1.1□□□□□ -2.23
UFD2YDL190C TVP15Q03860 143 aa1.1□□□□□ -2.23
UFD2YDL190C CDC123Q05791 360 aa1.1□□□□□ -2.23
UFD2YDL190C YPL150WQ12152 901 aa1.1□□□□□ -2.23
UFD2YDL190C YPS3Q12303 508 aa1.1□□□□□ -2.23
UFD2YDL190C CUP2P15315 225 aa1.1□□□□□ -2.23
UFD2YDL190C CBF1P17106 351 aa1.1□□□□□ -2.23
UFD2YDL190C APA2P22108 325 aa1.1□□□□□ -2.23
UFD2YDL190C DPB2P24482 689 aaPredicted RBP1.1□□□□□ -2.23
UFD2YDL190C GDH2P33327 1092 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C NTF2P33331 125 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C TRM9P49957 279 aa1.1□□□□□ -2.23
UFD2YDL190C MIC26P50087 233 aa1.1□□□□□ -2.23
UFD2YDL190C NIF3P53081 288 aa1.1□□□□□ -2.23
UFD2YDL190C FLC3P53121 802 aa1.1□□□□□ -2.23
UFD2YDL190C YGL034CP53186 121 aa1.1□□□□□ -2.23
UFD2YDL190C SEI1Q06058 285 aa1.1□□□□□ -2.23
UFD2YDL190C YPL264CQ08980 353 aa1.1□□□□□ -2.23
UFD2YDL190C YDR524C-BQ3E6R4 66 aa1.1□□□□□ -2.23
UFD2YDL190C YBL008W-AQ3E821 79 aa1.1□□□□□ -2.23
UFD2YDL190C YDR157WA0A023PZE8 133 aa1.1□□□□□ -2.23
UFD2YDL190C RPL28P02406 149 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C BCY1P07278 416 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C RPL27AP0C2H6 136 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C RPL27BP0C2H7 136 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C YAK1P14680 807 aa1.1□□□□□ -2.23
UFD2YDL190C SSO1P32867 290 aa1.1□□□□□ -2.23
UFD2YDL190C MID2P36027 376 aa1.1□□□□□ -2.23
UFD2YDL190C TRR2P38816 342 aa1.1□□□□□ -2.23
UFD2YDL190C YMR144WP40214 342 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C YJL028WP47062 111 aa1.1□□□□□ -2.23
UFD2YDL190C ALG13P53178 202 aa1.1□□□□□ -2.23
UFD2YDL190C ECM11Q04110 302 aa1.1□□□□□ -2.23
UFD2YDL190C YMR114CQ04471 368 aaKnown RBP1.1□□□□□ -2.23
UFD2YDL190C YDR124WQ04608 324 aa1.1□□□□□ -2.23
UFD2YDL190C SYC1Q08553 188 aaPredicted RBP1.1□□□□□ -2.23
UFD2YDL190C YOR186WQ08560 144 aa1.1□□□□□ -2.23
UFD2YDL190C IES3Q12345 250 aa1.1□□□□□ -2.23
UFD2YDL190C DCN1Q12395 269 aa1.1□□□□□ -2.23
UFD2YDL190C YBL112CQ3E7Y4 105 aa1.1□□□□□ -2.23
UFD2YDL190C SWI1P09547 1314 aa1.09□□□□□ -2.23
UFD2YDL190C IDH1P28834 360 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
UFD2YDL190C TRM7P38238 310 aaKnown RBP1.09□□□□□ -2.23
UFD2YDL190C SUR2P38992 349 aa1.09□□□□□ -2.23
UFD2YDL190C YIL001WP40560 513 aa1.09□□□□□ -2.23
UFD2YDL190C ADO1P47143 340 aaKnown RBP1.09□□□□□ -2.23
UFD2YDL190C MGA1P53050 456 aa1.09□□□□□ -2.23
UFD2YDL190C NSA1P53136 463 aaPredicted RBP1.09□□□□□ -2.23
UFD2YDL190C RSM27P53305 110 aa1.09□□□□□ -2.23
UFD2YDL190C YNL046WP53956 172 aa1.09□□□□□ -2.23
UFD2YDL190C EMI1Q04406 187 aa1.09□□□□□ -2.23
UFD2YDL190C HEM25Q07534 307 aa1.09□□□□□ -2.23
UFD2YDL190C YOL019WQ08157 551 aa1.09□□□□□ -2.23
UFD2YDL190C YPR011CQ12251 326 aa1.09□□□□□ -2.23
UFD2YDL190C PRR2Q12310 699 aa1.09□□□□□ -2.23
UFD2YDL190C TIM22Q12328 207 aa1.09□□□□□ -2.23
UFD2YDL190C MLP1Q02455 1875 aaKnown RBP1.09□□□□□ -2.24
UFD2YDL190C TEL1P38110 2787 aa1.09□□□□□ -2.24
UFD2YDL190C MYO1P08964 1928 aa1.09□□□□□ -2.24
UFD2YDL190C YEL009C-AA0A023PZF2 135 aa1.09□□□□□ -2.24
UFD2YDL190C HTB1P02293 131 aaKnown RBP1.09□□□□□ -2.24
UFD2YDL190C HTB2P02294 131 aa1.09□□□□□ -2.24
UFD2YDL190C PPH21P23594 369 aa1.09□□□□□ -2.24
UFD2YDL190C PRX1P34227 261 aaKnown RBP1.09□□□□□ -2.24
UFD2YDL190C TAF14P35189 244 aa1.09□□□□□ -2.24
UFD2YDL190C SSH1P38353 490 aaKnown RBP1.09□□□□□ -2.24
UFD2YDL190C SPL2P38839 148 aa1.09□□□□□ -2.24
UFD2YDL190C EGD2P38879 174 aaKnown RBP1.09□□□□□ -2.24
UFD2YDL190C MOB1P40484 314 aa1.09□□□□□ -2.24
UFD2YDL190C MCM22P47167 239 aa1.09□□□□□ -2.24
UFD2YDL190C YJR149WP47177 404 aa1.09□□□□□ -2.24
UFD2YDL190C NUP57P48837 541 aa1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 117 ms