RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C YGR201CP42936 225 aa3.56□□□□□ -1.84
CDC9YDL164C COS10P52924 374 aa3.56□□□□□ -1.84
CDC9YDL164C PDR12Q02785 1511 aa3.56□□□□□ -1.84
CDC9YDL164C AUS1Q08409 1394 aa3.55□□□□□ -1.84
CDC9YDL164C SWI1P09547 1314 aa3.55□□□□□ -1.84
CDC9YDL164C ILV6P25605 309 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C TRS65P32893 560 aa3.55□□□□□ -1.84
CDC9YDL164C NAT2P37293 288 aa3.55□□□□□ -1.84
CDC9YDL164C PDS1P40316 373 aaPredicted RBP3.55□□□□□ -1.84
CDC9YDL164C YGL039WP53183 348 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C ERV29P53337 310 aa3.55□□□□□ -1.84
CDC9YDL164C TIM8P57744 87 aa3.55□□□□□ -1.84
CDC9YDL164C PAL1Q05518 499 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C HRI1Q05905 244 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C EAF3Q12432 401 aa3.55□□□□□ -1.84
CDC9YDL164C YKL068W-AQ3E826 78 aa3.55□□□□□ -1.84
CDC9YDL164C PSK1P31374 1356 aa3.55□□□□□ -1.84
CDC9YDL164C ATR1P13090 542 aa3.55□□□□□ -1.84
CDC9YDL164C ERG24P32462 438 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C TRR2P38816 342 aa3.55□□□□□ -1.84
CDC9YDL164C LSM4P40070 187 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C HYR1P40581 163 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C FMP48P53233 369 aa3.55□□□□□ -1.84
CDC9YDL164C LSM7P53905 115 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C HNT1Q04344 158 aaKnown RBP3.55□□□□□ -1.84
CDC9YDL164C YMR317WQ04893 1140 aa3.55□□□□□ -1.84
CDC9YDL164C CRC1Q12289 327 aa3.55□□□□□ -1.84
CDC9YDL164C UBI4P0CG63 381 aaKnown RBP3.54□□□□□ -1.84
CDC9YDL164C APS1P35181 156 aa3.54□□□□□ -1.84
CDC9YDL164C CSH1P38287 376 aa3.54□□□□□ -1.84
CDC9YDL164C YGR050CP53231 118 aa3.54□□□□□ -1.84
CDC9YDL164C AAH1P53909 347 aa3.54□□□□□ -1.84
CDC9YDL164C AIM34Q03673 198 aa3.54□□□□□ -1.84
CDC9YDL164C YET2Q04210 160 aa3.54□□□□□ -1.84
CDC9YDL164C TRM12Q04235 462 aa3.54□□□□□ -1.84
CDC9YDL164C LIP2Q06005 328 aa3.54□□□□□ -1.84
CDC9YDL164C CCH1P50077 2039 aa3.54□□□□□ -1.84
CDC9YDL164C CAM1P29547 415 aaKnown RBP3.54□□□□□ -1.84
CDC9YDL164C CSE2P33308 149 aa3.54□□□□□ -1.84
CDC9YDL164C DOG2P38773 246 aa3.54□□□□□ -1.84
CDC9YDL164C YND1P40009 630 aa3.54□□□□□ -1.84
CDC9YDL164C YMR144WP40214 342 aaKnown RBP3.54□□□□□ -1.84
CDC9YDL164C YIL152WP40455 235 aa3.54□□□□□ -1.84
CDC9YDL164C ATG18P43601 500 aa3.54□□□□□ -1.84
CDC9YDL164C YGR018CP53211 109 aa3.54□□□□□ -1.84
CDC9YDL164C ELP3Q02908 557 aaKnown RBP3.54□□□□□ -1.84
CDC9YDL164C RRP40Q08285 240 aaKnown RBP3.54□□□□□ -1.84
CDC9YDL164C IES4Q08561 116 aa3.54□□□□□ -1.84
CDC9YDL164C YPL278CQ08990 100 aa3.54□□□□□ -1.84
CDC9YDL164C YPL245WQ12179 454 aaKnown RBP3.54□□□□□ -1.84
CDC9YDL164C YBL112CQ3E7Y4 105 aa3.54□□□□□ -1.84
CDC9YDL164C VTH1P40438 1549 aa3.53□□□□□ -1.84
CDC9YDL164C VTH2P40890 1549 aa3.53□□□□□ -1.84
CDC9YDL164C BGL2P15703 313 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C SEC14P24280 304 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C SHE1P38200 338 aa3.53□□□□□ -1.84
CDC9YDL164C PRS3P38689 320 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C GLC8P41818 229 aa3.53□□□□□ -1.84
CDC9YDL164C YGL082WP53155 381 aa3.53□□□□□ -1.84
CDC9YDL164C ACT1P60010 375 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C YDR249CQ03787 373 aa3.53□□□□□ -1.84
CDC9YDL164C YLR177WQ06251 628 aa3.53□□□□□ -1.84
CDC9YDL164C YPR011CQ12251 326 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-HO13535 1793 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-DR5P0C2I2 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-DR6P0C2I3 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-LR2P0C2I5 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-LR3P0C2I6 1755 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C TY1B-PR1P0C2I9 1755 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C TY1B-PR2P0C2J0 1756 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-PR3P0C2J1 1755 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C TY1B-JR1P47098 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-ML2Q03434 1755 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C TY1B-ER1Q03612 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-ML1Q04711 1755 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C TY1B-GR2Q12269 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-OLQ12273 1755 aa3.53□□□□□ -1.84
CDC9YDL164C TY1B-PLQ12414 1755 aaKnown RBP3.53□□□□□ -1.84
CDC9YDL164C BNR1P40450 1375 aa3.53□□□□□ -1.84
CDC9YDL164C DOP1Q03921 1698 aa3.53□□□□□ -1.84
CDC9YDL164C LTE1P07866 1435 aa3.53□□□□□ -1.85
CDC9YDL164C PDR11P40550 1411 aa3.53□□□□□ -1.85
CDC9YDL164C SEC22P22214 214 aa3.53□□□□□ -1.85
CDC9YDL164C YAP3P38749 330 aa3.53□□□□□ -1.85
CDC9YDL164C FAR7P43592 221 aa3.53□□□□□ -1.85
CDC9YDL164C YGR015CP53208 328 aa3.53□□□□□ -1.85
CDC9YDL164C RNH201P53942 307 aa3.53□□□□□ -1.85
CDC9YDL164C DYN2Q02647 92 aa3.53□□□□□ -1.85
CDC9YDL164C ERP1Q05359 219 aaKnown RBP3.53□□□□□ -1.85
CDC9YDL164C YPL225WQ08971 146 aaKnown RBP3.53□□□□□ -1.85
CDC9YDL164C MSI1P13712 422 aa3.52□□□□□ -1.85
CDC9YDL164C CNB1P25296 175 aa3.52□□□□□ -1.85
CDC9YDL164C LDB16P25587 256 aa3.52□□□□□ -1.85
CDC9YDL164C AHC2P25649 128 aa3.52□□□□□ -1.85
CDC9YDL164C AST2P39945 430 aaKnown RBP3.52□□□□□ -1.85
CDC9YDL164C IRC22P40006 225 aa3.52□□□□□ -1.85
CDC9YDL164C PRM5P40476 318 aa3.52□□□□□ -1.85
CDC9YDL164C RPA43P46669 326 aa3.52□□□□□ -1.85
CDC9YDL164C NCA3P46955 337 aa3.52□□□□□ -1.85
CDC9YDL164C ARP3P47117 449 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms