RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C MTR2P34232 184 aaKnown RBP4.02□□□□□ -1.77
CDC48YDL126C SSS1P35179 80 aa4.02□□□□□ -1.77
CDC48YDL126C YKL071WP36086 256 aa4.02□□□□□ -1.77
CDC48YDL126C OMA1P36163 345 aa4.02□□□□□ -1.77
CDC48YDL126C FLO10P36170 1169 aa4.02□□□□□ -1.77
CDC48YDL126C YCR087C-AP37263 153 aa4.02□□□□□ -1.77
CDC48YDL126C PRS3P38689 320 aaKnown RBP4.02□□□□□ -1.77
CDC48YDL126C MED6P38782 295 aa4.02□□□□□ -1.77
CDC48YDL126C BDH1P39714 382 aa4.02□□□□□ -1.77
CDC48YDL126C ISC1P40015 477 aaKnown RBP4.02□□□□□ -1.77
CDC48YDL126C AYR1P40471 297 aa4.02□□□□□ -1.77
CDC48YDL126C GDS1P41913 522 aa4.02□□□□□ -1.77
CDC48YDL126C UBP8P50102 471 aa4.02□□□□□ -1.77
CDC48YDL126C SEC13Q04491 297 aaKnown RBP4.02□□□□□ -1.77
CDC48YDL126C RRP42Q12277 265 aaPredicted RBP4.02□□□□□ -1.77
CDC48YDL126C YLR099W-AQ3E798 87 aa4.02□□□□□ -1.77
CDC48YDL126C CPA1P07258 411 aaKnown RBP4.02□□□□□ -1.77
CDC48YDL126C SGA1P08019 549 aa4.02□□□□□ -1.77
CDC48YDL126C NRP1P32770 719 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
CDC48YDL126C ROT2P38138 954 aa4.02□□□□□ -1.77
CDC48YDL126C LAG1P38703 411 aa4.02□□□□□ -1.77
CDC48YDL126C RFC2P40348 353 aa4.02□□□□□ -1.77
CDC48YDL126C MEP2P41948 499 aa4.02□□□□□ -1.77
CDC48YDL126C UBX6P47049 396 aa4.02□□□□□ -1.77
CDC48YDL126C YJR011CP47086 261 aaPredicted RBP4.02□□□□□ -1.77
CDC48YDL126C SBH2P52871 88 aa4.02□□□□□ -1.77
CDC48YDL126C MRPL35Q06678 367 aa4.02□□□□□ -1.77
CDC48YDL126C SAM4Q08985 325 aaKnown RBP4.02□□□□□ -1.77
CDC48YDL126C TMS1Q12116 473 aa4.02□□□□□ -1.77
CDC48YDL126C PST1Q12355 444 aa4.02□□□□□ -1.77
CDC48YDL126C VMA9Q3E7B6 73 aa4.02□□□□□ -1.77
CDC48YDL126C YER190C-BP0CX94 160 aa4.01□□□□□ -1.77
CDC48YDL126C YEL077W-AP0CX95 160 aa4.01□□□□□ -1.77
CDC48YDL126C YGR296C-BP0CX96 160 aa4.01□□□□□ -1.77
CDC48YDL126C YPL283W-BP0CX97 160 aa4.01□□□□□ -1.77
CDC48YDL126C YPR204C-AP0CX98 160 aa4.01□□□□□ -1.77
CDC48YDL126C ATP10P18496 279 aa4.01□□□□□ -1.77
CDC48YDL126C COQ3P27680 312 aa4.01□□□□□ -1.77
CDC48YDL126C UGX2P32772 223 aa4.01□□□□□ -1.77
CDC48YDL126C SDH3P33421 198 aa4.01□□□□□ -1.77
CDC48YDL126C SOL2P37262 315 aa4.01□□□□□ -1.77
CDC48YDL126C PRE6P40303 254 aaKnown RBP4.01□□□□□ -1.77
CDC48YDL126C PTR3P43606 678 aa4.01□□□□□ -1.77
CDC48YDL126C YHC3P47040 408 aa4.01□□□□□ -1.77
CDC48YDL126C COG7P53195 279 aa4.01□□□□□ -1.77
CDC48YDL126C PEX30Q06169 523 aa4.01□□□□□ -1.77
CDC48YDL126C YPL257WQ08974 193 aa4.01□□□□□ -1.77
CDC48YDL126C USB1Q12208 290 aaKnown RBP4.01□□□□□ -1.77
CDC48YDL126C TOM1Q03280 3268 aa4.01□□□□□ -1.77
CDC48YDL126C COX5BP00425 151 aa4.01□□□□□ -1.77
CDC48YDL126C CPR1P14832 162 aaKnown RBP4.01□□□□□ -1.77
CDC48YDL126C MCH2P36032 473 aa4.01□□□□□ -1.77
CDC48YDL126C CHS7P38843 316 aa4.01□□□□□ -1.77
CDC48YDL126C COG3P40094 801 aa4.01□□□□□ -1.77
CDC48YDL126C SAS2P40963 338 aa4.01□□□□□ -1.77
CDC48YDL126C PHB2P50085 310 aa4.01□□□□□ -1.77
CDC48YDL126C LSM7P53905 115 aaKnown RBP4.01□□□□□ -1.77
CDC48YDL126C YHC1Q05900 231 aaKnown RBP4.01□□□□□ -1.77
CDC48YDL126C PRP11Q07350 266 aaPredicted RBP4.01□□□□□ -1.77
CDC48YDL126C YLR036CQ07986 203 aa4.01□□□□□ -1.77
CDC48YDL126C POM33Q12164 279 aa4.01□□□□□ -1.77
CDC48YDL126C YKL018C-AQ3E7A7 99 aa4.01□□□□□ -1.77
CDC48YDL126C PCC1Q3E833 88 aa4.01□□□□□ -1.77
CDC48YDL126C YOR304C-AO14468 76 aa4□□□□□ -1.77
CDC48YDL126C RAS2P01120 322 aaKnown RBP4□□□□□ -1.77
CDC48YDL126C HAP3P13434 144 aa4□□□□□ -1.77
CDC48YDL126C FPR1P20081 114 aaKnown RBP4□□□□□ -1.77
CDC48YDL126C RPB5P20434 215 aa4□□□□□ -1.77
CDC48YDL126C MXR2P25566 168 aa4□□□□□ -1.77
CDC48YDL126C PPZ1P26570 692 aa4□□□□□ -1.77
CDC48YDL126C YPT53P36019 220 aa4□□□□□ -1.77
CDC48YDL126C RTC2P38279 296 aa4□□□□□ -1.77
CDC48YDL126C PAC2P39937 518 aa4□□□□□ -1.77
CDC48YDL126C COS10P52924 374 aa4□□□□□ -1.77
CDC48YDL126C YGR015CP53208 328 aa4□□□□□ -1.77
CDC48YDL126C MKC7P53379 596 aa4□□□□□ -1.77
CDC48YDL126C MSO1P53604 210 aaKnown RBP4□□□□□ -1.77
CDC48YDL126C ODC1Q03028 310 aa4□□□□□ -1.77
CDC48YDL126C NUP53Q03790 475 aa4□□□□□ -1.77
CDC48YDL126C EMI1Q04406 187 aa4□□□□□ -1.77
CDC48YDL126C RNH202Q05635 350 aa4□□□□□ -1.77
CDC48YDL126C TPO3Q06451 622 aa4□□□□□ -1.77
CDC48YDL126C MMT2Q08970 484 aa4□□□□□ -1.77
CDC48YDL126C BTS1Q12051 335 aa4□□□□□ -1.77
CDC48YDL126C YPL245WQ12179 454 aaKnown RBP4□□□□□ -1.77
CDC48YDL126C TPO4Q12256 659 aa4□□□□□ -1.77
CDC48YDL126C OPI3P05375 206 aa4□□□□□ -1.77
CDC48YDL126C FUN14P18411 198 aa4□□□□□ -1.77
CDC48YDL126C MSK1P32048 576 aa4□□□□□ -1.77
CDC48YDL126C MDH3P32419 343 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
CDC48YDL126C BAT1P38891 393 aaKnown RBP4□□□□□ -1.77
CDC48YDL126C FAU1P40099 211 aa4□□□□□ -1.77
CDC48YDL126C LAS21P40367 830 aa4□□□□□ -1.77
CDC48YDL126C PAU15P40585 124 aa4□□□□□ -1.77
CDC48YDL126C YCH1P42937 148 aa4□□□□□ -1.77
CDC48YDL126C MOB2P43563 287 aa4□□□□□ -1.77
CDC48YDL126C YJR012CP47087 207 aa4□□□□□ -1.77
CDC48YDL126C MDM34P53083 459 aa4□□□□□ -1.77
CDC48YDL126C SYF2P53277 215 aaPredicted RBP4□□□□□ -1.77
CDC48YDL126C MPA43P53583 542 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms