RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	ECM19	Q06011	112 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YAL067W-A	Q8TGK6	75 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	SWI1	P09547	1314 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	NUF2	P33895	451 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	SPL2	P38839	148 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	TEM1	P38987	245 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	MRPL49	P40858	161 aa	Predicted RBP	3.89	□□□□□ -1.79
SMP1	YBR182C	PRM10	P42946	383 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YJL028W	P47062	111 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	CAX4	P53223	239 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	NUP49	Q02199	472 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	PET191	Q02772	108 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YMD8	Q03697	442 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YLR030W	Q07967	263 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YLR053C	Q12026	108 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	PST1	Q12355	444 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YMR230W-A	Q3E7B5	62 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	HTL1	Q9URQ5	78 aa		3.89	□□□□□ -1.79
SMP1	YBR182C	YEL009C-A	A0A023PZF2	135 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	SWD3	P38123	315 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	YHL044W	P38727	235 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	RMD6	P39975	231 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	YER076C	P40049	302 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	AGE2	P40529	298 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	YPI1	P43587	155 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	COQ5	P49017	307 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	YGR042W	P53227	271 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	YPL039W	Q03080	316 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	YOR283W	Q12040	230 aa	Known RBP	3.88	□□□□□ -1.79
SMP1	YBR182C	NSL1	Q12143	216 aa		3.88	□□□□□ -1.79
SMP1	YBR182C	SMT3	Q12306	101 aa	Known RBP	3.88	□□□□□ -1.79
SMP1	YBR182C	YLR462W	O13556	202 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	GRX2	P17695	143 aa	Known RBP	3.87	□□□□□ -1.79
SMP1	YBR182C	YKR041W	P36134	250 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	DOG2	P38773	246 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	DOG1	P38774	246 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	YEL075C	P39972	122 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	UFD1	P53044	361 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	NQM1	P53228	333 aa	Predicted RBP	3.87	□□□□□ -1.79
SMP1	YBR182C	RSM27	P53305	110 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	EMI1	Q04406	187 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	YLR179C	Q06252	201 aa	Known RBP	3.87	□□□□□ -1.79
SMP1	YBR182C	RIO1	Q12196	484 aa	Known RBP	3.87	□□□□□ -1.79
SMP1	YBR182C	TIM22	Q12328	207 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	EMP46	Q12396	444 aa		3.87	□□□□□ -1.79
SMP1	YBR182C	CUP2	P15315	225 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	CLG1	P35190	452 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	MRPL27	P36526	146 aa	Predicted RBP	3.86	□□□□□ -1.79
SMP1	YBR182C	YBL081W	P38180	368 aa	Known RBP	3.86	□□□□□ -1.79
SMP1	YBR182C	LSM4	P40070	187 aa	Known RBP	3.86	□□□□□ -1.79
SMP1	YBR182C	FMP32	P43557	207 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	YGL204C	P53089	101 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	YNL184C	P53876	108 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	YOL160W	Q08321	113 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	YPL257W	Q08974	193 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	YDL211C	Q12121	372 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	NOT5	Q12514	560 aa	Predicted RBP	3.86	□□□□□ -1.79
SMP1	YBR182C	YOR020W-A	Q3E824	90 aa		3.86	□□□□□ -1.79
SMP1	YBR182C	YHR139C-A	O13536	103 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	SNF4	P12904	322 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	RPB9	P27999	122 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	TCA17	P32613	152 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	PTM1	P32857	523 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	SFC1	P33303	322 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	EDC3	P39998	551 aa	Known RBP	3.85	□□□□□ -1.79
SMP1	YBR182C	UFE1	P41834	346 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	IMP4	P53941	290 aa	Known RBP	3.85	□□□□□ -1.79
SMP1	YBR182C	OSH6	Q02201	448 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	MRPS16	Q02608	121 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	PLP1	Q04004	230 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	MCH1	Q07376	486 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	YPL264C	Q08980	353 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	YBL112C	Q3E7Y4	105 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	ISD11	Q6Q560	94 aa		3.85	□□□□□ -1.79
SMP1	YBR182C	CDC7	P06243	507 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	SIR2	P06700	562 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	CMD1	P06787	147 aa	Known RBP	3.84	□□□□□ -1.79
SMP1	YBR182C	PET54	P10834	293 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	SEC14	P24280	304 aa	Known RBP	3.84	□□□□□ -1.79
SMP1	YBR182C	HMF1	P40037	129 aa	Known RBP	3.84	□□□□□ -1.79
SMP1	YBR182C	RSM25	P40496	264 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	MAK3	Q03503	176 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	GRH1	Q04410	372 aa	Known RBP	3.84	□□□□□ -1.79
SMP1	YBR182C	SUE1	Q06524	206 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	YOL019W	Q08157	551 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	RDI1	Q12434	202 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	PEX11	Q12462	236 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	YHR214C-E	Q8TGK0	99 aa		3.84	□□□□□ -1.79
SMP1	YBR182C	FLO11	P08640	1367 aa		3.83	□□□□□ -1.8
SMP1	YBR182C	NUP157	P40064	1391 aa	Known RBP	3.83	□□□□□ -1.8
SMP1	YBR182C	RPS24A	P0CX31	135 aa	Known RBP	3.83	□□□□□ -1.8
SMP1	YBR182C	RPS24B	P0CX32	135 aa	Known RBP	3.83	□□□□□ -1.8
SMP1	YBR182C	SEN2	P16658	377 aa		3.83	□□□□□ -1.8
SMP1	YBR182C	FCY2	P17064	533 aa		3.83	□□□□□ -1.8
SMP1	YBR182C	MAG1	P22134	296 aa	Known RBP	3.83	□□□□□ -1.8
SMP1	YBR182C	SEC22	P22214	214 aa		3.83	□□□□□ -1.8
SMP1	YBR182C	RNP1	P32385	249 aa		3.83	□□□□□ -1.8
SMP1	YBR182C	ERG24	P32462	438 aa	Known RBP	3.83	□□□□□ -1.8
SMP1	YBR182C	TRM7	P38238	310 aa	Known RBP	3.83	□□□□□ -1.8
SMP1	YBR182C	TRR2	P38816	342 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms