RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W ATG7P38862 630 aa0.38□□□□□ -2.35
UTP20YBL004W ARB1P40024 610 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W EFM4P40516 257 aa0.38□□□□□ -2.35
UTP20YBL004W STE24P47154 453 aa0.38□□□□□ -2.35
UTP20YBL004W YKR011CQ02209 353 aa0.38□□□□□ -2.35
UTP20YBL004W SPC3Q12133 184 aa0.38□□□□□ -2.35
UTP20YBL004W SIR2P06700 562 aa0.38□□□□□ -2.35
UTP20YBL004W ARG80P07249 177 aa0.38□□□□□ -2.35
UTP20YBL004W PRE7P23724 241 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W PPQ1P32945 549 aa0.38□□□□□ -2.35
UTP20YBL004W SSH1P38353 490 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W YJL027CP47063 138 aaPredicted RBP0.38□□□□□ -2.35
UTP20YBL004W AIM24P47127 394 aa0.38□□□□□ -2.35
UTP20YBL004W SSU72P53538 206 aaPredicted RBP0.38□□□□□ -2.35
UTP20YBL004W RSM24Q03976 319 aa0.38□□□□□ -2.35
UTP20YBL004W TAF11Q04226 346 aa0.38□□□□□ -2.35
UTP20YBL004W PBP4Q07362 185 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W RFC5P38251 354 aa0.38□□□□□ -2.35
UTP20YBL004W MMM1P41800 426 aa0.38□□□□□ -2.35
UTP20YBL004W PAM16P42949 149 aa0.38□□□□□ -2.35
UTP20YBL004W MSO1P53604 210 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W MRPS8Q03799 155 aa0.38□□□□□ -2.35
UTP20YBL004W DDP1Q99321 188 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W RPL33AP05744 107 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W RPS16AP0CX51 143 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W RPS16BP0CX52 143 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W LSB5P25369 354 aa0.38□□□□□ -2.35
UTP20YBL004W SET5P38890 526 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W RPL33BP41056 107 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W EFM5P53200 248 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W MRX9Q07349 420 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W CDC8P00572 216 aa0.38□□□□□ -2.35
UTP20YBL004W CYC3P06182 269 aa0.38□□□□□ -2.35
UTP20YBL004W VMA8P32610 256 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W SPI1P40092 148 aa0.38□□□□□ -2.35
UTP20YBL004W POR2P40478 281 aa0.38□□□□□ -2.35
UTP20YBL004W GCN20P43535 752 aaKnown RBP0.38□□□□□ -2.35
UTP20YBL004W VMA6P32366 345 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W NGG1P32494 702 aa0.37□□□□□ -2.35
UTP20YBL004W AIM19P40502 157 aa0.37□□□□□ -2.35
UTP20YBL004W YJL028WP47062 111 aa0.37□□□□□ -2.35
UTP20YBL004W YAE1P47118 141 aaPredicted RBP0.37□□□□□ -2.35
UTP20YBL004W PHO92Q06390 306 aa0.37□□□□□ -2.35
UTP20YBL004W YPL245WQ12179 454 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W VAM3Q12241 283 aa0.37□□□□□ -2.35
UTP20YBL004W URA6P15700 204 aa0.37□□□□□ -2.35
UTP20YBL004W RPL5P26321 297 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W MRP49P32388 137 aa0.37□□□□□ -2.35
UTP20YBL004W MTC2P34246 357 aa0.37□□□□□ -2.35
UTP20YBL004W YLF2P38746 405 aa0.37□□□□□ -2.35
UTP20YBL004W ASP1P38986 381 aaPredicted RBP0.37□□□□□ -2.35
UTP20YBL004W RET2P43621 546 aa0.37□□□□□ -2.35
UTP20YBL004W COX16P47081 118 aa0.37□□□□□ -2.35
UTP20YBL004W DIG1Q03063 452 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W YMR155WQ03795 547 aa0.37□□□□□ -2.35
UTP20YBL004W SNO4Q04902 237 aa0.37□□□□□ -2.35
UTP20YBL004W YLR173WQ06247 608 aa0.37□□□□□ -2.35
UTP20YBL004W IRC23Q08416 157 aa0.37□□□□□ -2.35
UTP20YBL004W HSP33Q08914 237 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W HSP32Q08992 237 aa0.37□□□□□ -2.35
UTP20YBL004W RPL39P04650 51 aa0.37□□□□□ -2.35
UTP20YBL004W SPG1P50088 95 aa0.37□□□□□ -2.35
UTP20YBL004W TCD1P38756 429 aa0.37□□□□□ -2.35
UTP20YBL004W MMS2P53152 137 aa0.37□□□□□ -2.35
UTP20YBL004W TIM18Q08749 192 aa0.37□□□□□ -2.35
UTP20YBL004W NTO1Q12311 748 aa0.37□□□□□ -2.35
UTP20YBL004W FRS1P15624 595 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W RPS1BP23248 255 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W FUN26P31381 517 aa0.37□□□□□ -2.35
UTP20YBL004W YBR285WP38354 144 aa0.37□□□□□ -2.35
UTP20YBL004W YHK8P38776 514 aa0.37□□□□□ -2.35
UTP20YBL004W TFG2P41896 400 aaPredicted RBP0.37□□□□□ -2.35
UTP20YBL004W HMO1Q03973 246 aaKnown RBP0.37□□□□□ -2.35
UTP20YBL004W YLR126CQ12288 251 aa0.37□□□□□ -2.35
UTP20YBL004W RMP1Q12530 201 aa0.37□□□□□ -2.35
UTP20YBL004W ATG40Q99325 256 aa0.37□□□□□ -2.35
UTP20YBL004W HSP30P25619 332 aa0.37□□□□□ -2.35
UTP20YBL004W NUP2P32499 720 aa0.37□□□□□ -2.35
UTP20YBL004W TIM12P32830 109 aa0.37□□□□□ -2.35
UTP20YBL004W YPK3P38070 525 aa0.37□□□□□ -2.35
UTP20YBL004W SDS24P38314 527 aa0.37□□□□□ -2.35
UTP20YBL004W YFL019CP43576 117 aa0.37□□□□□ -2.35
UTP20YBL004W SKP1P52286 194 aa0.37□□□□□ -2.35
UTP20YBL004W AIF1P52923 378 aa0.37□□□□□ -2.35
UTP20YBL004W ISA2Q12425 185 aa0.37□□□□□ -2.35
UTP20YBL004W HUT1Q12520 339 aa0.37□□□□□ -2.35
UTP20YBL004W QCR7P00128 127 aa0.36□□□□□ -2.35
UTP20YBL004W URA3P03962 267 aa0.36□□□□□ -2.35
UTP20YBL004W YDR034C-AP0C289 58 aa0.36□□□□□ -2.35
UTP20YBL004W DBR1P24309 405 aaKnown RBP0.36□□□□□ -2.35
UTP20YBL004W NRG2P38082 220 aa0.36□□□□□ -2.35
UTP20YBL004W FMP41P53889 259 aaKnown RBP0.36□□□□□ -2.35
UTP20YBL004W SYC1Q08553 188 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W DPH5P32469 300 aaPredicted RBP0.36□□□□□ -2.35
UTP20YBL004W SEC66P33754 206 aa0.36□□□□□ -2.35
UTP20YBL004W MRP8P35719 219 aa0.36□□□□□ -2.35
UTP20YBL004W CTR2P38865 189 aa0.36□□□□□ -2.35
UTP20YBL004W ECM1P39715 212 aa0.36□□□□□ -2.35
UTP20YBL004W NNT1Q05874 261 aa0.36□□□□□ -2.35
UTP20YBL004W RIO1Q12196 484 aaKnown RBP0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms