RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	RNA15	P25299	296 aa	Predicted RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	POP5	P28005	173 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	TIM12	P32830	109 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	ANR2	P36090	516 aa	Predicted RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	GLY1	P37303	387 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	YPT10	P38146	199 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SHG1	P38337	142 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	PTH1	P38876	190 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	POP1	P41812	875 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	AIM24	P47127	394 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	DOC1	P53068	250 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	MRPL22	P53881	309 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	RSM23	Q01163	450 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SEC13	Q04491	297 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	TAZ1	Q06510	381 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	MED7	Q08278	222 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	TY1A-BL	Q12266	440 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	HTZ1	Q12692	134 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	OPI3	P05375	206 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SPS2	P08459	502 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	HTD2	P38790	280 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	PHO90	P39535	881 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	YER137C	P40083	148 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	AIR1	P40507	360 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	YGR210C	P42942	411 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SFH5	P47008	294 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	TAD2	P47058	250 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SSN8	P47821	323 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SEC16	P48415	2195 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	UBP8	P50102	471 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	YGL235W	P53071	178 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	NSA1	P53136	463 aa	Predicted RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	SAY1	P53324	424 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	SUN4	P53616	420 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	CAC2	Q04199	468 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	NMA1	Q06178	401 aa	Known RBP	4.05	□□□□□ -1.76
SWC3	YAL011W	LDS2	Q08218	356 aa		4.05	□□□□□ -1.76
SWC3	YAL011W	CHO1	P08456	276 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	ARF1	P11076	181 aa	Known RBP	4.04	□□□□□ -1.76
SWC3	YAL011W	BAR1	P12630	587 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	CDC39	P25655	2108 aa	Known RBP	4.04	□□□□□ -1.76
SWC3	YAL011W	ELF1	P36053	145 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	DER1	P38307	211 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	MIC26	P50087	233 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	ERG13	P54839	491 aa	Known RBP	4.04	□□□□□ -1.76
SWC3	YAL011W	YDR248C	Q03786	193 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	AIM36	Q03798	255 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	TY1A-MR1	Q04215	440 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	DXO1	Q06349	442 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	YPR127W	Q06494	345 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	YPR174C	Q06616	221 aa	Predicted RBP	4.04	□□□□□ -1.76
SWC3	YAL011W	DCN1	Q12395	269 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	PSF1	Q12488	208 aa		4.04	□□□□□ -1.76
SWC3	YAL011W	ACC1	Q00955	2233 aa	Known RBP	4.04	□□□□□ -1.76
SWC3	YAL011W	ADK1	P07170	222 aa	Known RBP	4.03	□□□□□ -1.76
SWC3	YAL011W	PUT1	P09368	476 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	RPL20A	P0CX23	172 aa	Known RBP	4.03	□□□□□ -1.76
SWC3	YAL011W	RPL20B	P0CX24	172 aa	Predicted RBP	4.03	□□□□□ -1.76
SWC3	YAL011W	RPB8	P20436	146 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	ERG4	P25340	473 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	FUN19	P28003	413 aa	Predicted RBP	4.03	□□□□□ -1.76
SWC3	YAL011W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SWC3	YAL011W	PAU2	P32612	120 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	TOA2	P32774	122 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	PPZ2	P33329	710 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	RPS27A	P35997	82 aa	Known RBP	4.03	□□□□□ -1.76
SWC3	YAL011W	RPS27B	P38711	82 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	CHS7	P38843	316 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	VPS52	P39904	641 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	IDP2	P41939	412 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	PMT6	P42934	759 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	CIN2	P46670	268 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	RPE1	P46969	238 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	ALB1	P47019	175 aa	Predicted RBP	4.03	□□□□□ -1.76
SWC3	YAL011W	MOG1	P47123	218 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	MRPS16	Q02608	121 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	YPL077C	Q02831	240 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	VBA1	Q04301	562 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	HRT1	Q08273	121 aa		4.03	□□□□□ -1.76
SWC3	YAL011W	RNA14	P25298	677 aa	Known RBP	4.03	□□□□□ -1.77
SWC3	YAL011W	MCH2	P36032	473 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	SWD2	P36104	329 aa	Predicted RBP	4.03	□□□□□ -1.77
SWC3	YAL011W	VMA7	P39111	118 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	YNL208W	P40159	199 aa	Known RBP	4.03	□□□□□ -1.77
SWC3	YAL011W	BMT5	P40493	336 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	CAT5	P41735	233 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	ADO1	P47143	340 aa	Known RBP	4.03	□□□□□ -1.77
SWC3	YAL011W	JAC1	P53193	184 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	YNR014W	P53719	212 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	YNR066C	P53752	436 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	GPI15	P53961	229 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	YVH1	Q02256	364 aa	Known RBP	4.03	□□□□□ -1.77
SWC3	YAL011W	NCE101	Q02820	53 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	YNG1	Q08465	219 aa		4.03	□□□□□ -1.77
SWC3	YAL011W	ATS1	P31386	333 aa		4.02	□□□□□ -1.77
SWC3	YAL011W	ERG24	P32462	438 aa	Known RBP	4.02	□□□□□ -1.77
SWC3	YAL011W	YKL187C	P34231	750 aa		4.02	□□□□□ -1.77
SWC3	YAL011W	LST4	P34239	828 aa		4.02	□□□□□ -1.77
SWC3	YAL011W	YKL063C	P35725	167 aa		4.02	□□□□□ -1.77
SWC3	YAL011W	SFK1	P35735	353 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms