RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	SER33	P40510	469 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	YGR201C	P42936	225 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	PMT4	P46971	762 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	IRC18	P47056	224 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	UBC13	P52490	153 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	PRM8	P53174	237 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	COG7	P53195	279 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	YLR152C	P54072	576 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	NUP49	Q02199	472 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	YKR005C	Q02203	525 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	ABF2	Q02486	183 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	ODC1	Q03028	310 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	YDR248C	Q03786	193 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	GPI17	Q04080	534 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	YPR098C	Q06089	161 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	DXO1	Q06349	442 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	DTD1	Q07648	150 aa	Known RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	RDL2	Q08742	149 aa	Known RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	PST2	Q12335	198 aa	Known RBP	3.16	□□□□□ -1.9
YAL004W	YAL004W	TFC7	Q12415	435 aa		3.16	□□□□□ -1.9
YAL004W	YAL004W	TPI1	P00942	248 aa	Known RBP	3.15	□□□□□ -1.91
YAL004W	YAL004W	AQY1	P0CD91	305 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	PET54	P10834	293 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	CTA1	P15202	515 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	INO2	P26798	304 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	COQ3	P27680	312 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	ARN2	P38724	620 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	AST2	P39945	430 aa	Known RBP	3.15	□□□□□ -1.91
YAL004W	YAL004W	PAC10	P48363	199 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	TRM9	P49957	279 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	SDT1	P53078	280 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	YNL234W	P53857	426 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	FYV6	P53913	173 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	YLR446W	Q06204	433 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	NOC4	Q06512	552 aa	Predicted RBP	3.15	□□□□□ -1.91
YAL004W	YAL004W	YLR031W	Q07978	186 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	HNT3	Q08702	217 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	TPO4	Q12256	659 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	YLR126C	Q12288	251 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	RDL1	Q12305	139 aa	Known RBP	3.15	□□□□□ -1.91
YAL004W	YAL004W	MRX4	Q12467	430 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	YNL162W-A	Q3E7A8	72 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	LAA1	P39526	2014 aa		3.15	□□□□□ -1.91
YAL004W	YAL004W	SPS100	P13130	326 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	BUD23	P25627	275 aa	Predicted RBP	3.14	□□□□□ -1.91
YAL004W	YAL004W	RCN1	P36054	211 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	APD1	P38281	316 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	RRP3	P38712	501 aa	Known RBP	3.14	□□□□□ -1.91
YAL004W	YAL004W	WSC4	P38739	605 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	FCY21	P40039	528 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	YJR056C	P47115	236 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	VHT1	P53241	593 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	YNR066C	P53752	436 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	YPL113C	Q02961	396 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	RSC9	Q03124	581 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	BNA5	Q05979	453 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	ORM2	Q06144	216 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	NEJ1	Q06148	342 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	TPO3	Q06451	622 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	TAZ1	Q06510	381 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	ATG10	Q07879	167 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	PFA4	Q12006	378 aa		3.14	□□□□□ -1.91
YAL004W	YAL004W	RPS14A	P06367	137 aa	Known RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	YOL163W	P0CF20	169 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	IFM1	P25038	676 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	RPL16A	P26784	199 aa	Known RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
YAL004W	YAL004W	YKL075C	P36083	450 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	MRPL3	P36516	390 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	TRM7	P38238	310 aa	Known RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	YBR096W	P38256	230 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	RPS14B	P39516	138 aa	Known RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	MST28	P39552	234 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	RRG9	P40156	214 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	GWT1	P47026	490 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	YPS5	P53057	165 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	ARO8	P53090	500 aa	Known RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	JAC1	P53193	184 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	MSO1	P53604	210 aa	Known RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	YMD8	Q03697	442 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	YMR166C	Q03829	368 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	YML096W	Q04489	525 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	DPP1	Q05521	289 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	RNH202	Q05635	350 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	YLR036C	Q07986	203 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	FCY22	Q12119	530 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	BSC1	Q12140	328 aa		3.13	□□□□□ -1.91
YAL004W	YAL004W	YGK3	Q12222	375 aa	Predicted RBP	3.13	□□□□□ -1.91
YAL004W	YAL004W	SAL1	D6W196	494 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	TIM9	O74700	87 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	CUP2	P15315	225 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	PHO80	P20052	293 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	TAH1	P25638	111 aa	Predicted RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	OAC1	P32332	324 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	PDC2	P32896	925 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	LHP1	P33399	275 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	KTI12	P34253	313 aa	Known RBP	3.12	□□□□□ -1.91
YAL004W	YAL004W	CLG1	P35190	452 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	UPS2	P35200	230 aa		3.12	□□□□□ -1.91
YAL004W	YAL004W	ARC40	P38328	384 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms