RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 DSK2P48510 373 aa5.37□□□□□ -1.55
NME1NME1 ABF2Q02486 183 aa5.37□□□□□ -1.55
NME1NME1 SUE1Q06524 206 aa5.37□□□□□ -1.55
NME1NME1 PRX1P34227 261 aaKnown RBP5.36□□□□□ -1.55
NME1NME1 SRY1P36007 326 aa5.36□□□□□ -1.55
NME1NME1 RPA43P46669 326 aa5.36□□□□□ -1.55
NME1NME1 YJR146WP47174 117 aa5.36□□□□□ -1.55
NME1NME1 YGR026WP53217 278 aa5.36□□□□□ -1.55
NME1NME1 LSO2Q3E772 92 aaKnown RBP5.36□□□□□ -1.55
NME1NME1 FCY2P17064 533 aa5.35□□□□□ -1.55
NME1NME1 SCM4P32564 187 aa5.35□□□□□ -1.55
NME1NME1 CLB6P32943 380 aa5.35□□□□□ -1.55
NME1NME1 MED6P38782 295 aa5.35□□□□□ -1.55
NME1NME1 MRPL49P40858 161 aaPredicted RBP5.35□□□□□ -1.55
NME1NME1 ATG39Q06159 398 aa5.35□□□□□ -1.55
NME1NME1 YDR157WA0A023PZE8 133 aa5.34□□□□□ -1.55
NME1NME1 YHR139C-AO13536 103 aa5.34□□□□□ -1.55
NME1NME1 CDC28P00546 298 aaKnown RBP5.34□□□□□ -1.55
NME1NME1 YHR032W-AP0C5N6 59 aa5.34□□□□□ -1.55
NME1NME1 IDH1P28834 360 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
NME1NME1 BXI1P48558 297 aa5.34□□□□□ -1.55
NME1NME1 SLM2P53955 656 aa5.34□□□□□ -1.55
NME1NME1 YMD8Q03697 442 aa5.34□□□□□ -1.55
NME1NME1 YMR226CQ05016 267 aaKnown RBP5.34□□□□□ -1.55
NME1NME1 CDD1Q06549 142 aa5.34□□□□□ -1.55
NME1NME1 VPS68Q12016 184 aa5.33□□□□□ -1.56
NME1NME1 DBF2P22204 572 aa5.32□□□□□ -1.56
NME1NME1 YBR063CP38083 404 aa5.31□□□□□ -1.56
NME1NME1 SNX4P47057 423 aa5.31□□□□□ -1.56
NME1NME1 YDR248CQ03786 193 aa5.31□□□□□ -1.56
NME1NME1 AKR2Q12013 749 aa5.31□□□□□ -1.56
NME1NME1 VMA11P32842 164 aa5.3□□□□□ -1.56
NME1NME1 RFC4P40339 323 aaKnown RBP5.3□□□□□ -1.56
NME1NME1 CUS2P53830 285 aaPredicted RBP5.3□□□□□ -1.56
NME1NME1 DID2P69771 204 aa5.3□□□□□ -1.56
NME1NME1 YRA1Q12159 226 aaKnown RBP5.3□□□□□ -1.56
NME1NME1 FKS1P38631 1876 aaKnown RBP5.29□□□□□ -1.56
NME1NME1 TAF14P35189 244 aa5.29□□□□□ -1.56
NME1NME1 ECM33P38248 429 aaKnown RBP5.29□□□□□ -1.56
NME1NME1 DOG2P38773 246 aa5.29□□□□□ -1.56
NME1NME1 DOG1P38774 246 aa5.29□□□□□ -1.56
NME1NME1 SMD3P43321 101 aaKnown RBP5.29□□□□□ -1.56
NME1NME1 IRC18P47056 224 aa5.29□□□□□ -1.56
NME1NME1 PRM8P53174 237 aa5.29□□□□□ -1.56
NME1NME1 MHT1Q12525 324 aa5.29□□□□□ -1.56
NME1NME1 RSM25P40496 264 aa5.28□□□□□ -1.56
NME1NME1 FAR7P43592 221 aa5.28□□□□□ -1.56
NME1NME1 COS6P53344 381 aa5.28□□□□□ -1.56
NME1NME1 SCO1P23833 295 aa5.27□□□□□ -1.57
NME1NME1 IKI1P38874 309 aa5.27□□□□□ -1.57
NME1NME1 MRPS17Q03246 237 aaPredicted RBP5.27□□□□□ -1.57
NME1NME1 GET4Q12125 312 aa5.27□□□□□ -1.57
NME1NME1 HTB1P02293 131 aaKnown RBP5.26□□□□□ -1.57
NME1NME1 HTB2P02294 131 aa5.26□□□□□ -1.57
NME1NME1 OAC1P32332 324 aa5.26□□□□□ -1.57
NME1NME1 APS1P35181 156 aa5.26□□□□□ -1.57
NME1NME1 JIP3O13555 125 aa5.25□□□□□ -1.57
NME1NME1 YPR170W-BP0C5R9 85 aa5.25□□□□□ -1.57
NME1NME1 MGM101P32787 269 aaKnown RBP5.25□□□□□ -1.57
NME1NME1 CTR2P38865 189 aa5.25□□□□□ -1.57
NME1NME1 PDR17P53844 350 aa5.25□□□□□ -1.57
NME1NME1 RPL9AP05738 191 aaKnown RBP5.24□□□□□ -1.57
NME1NME1 CBF1P17106 351 aa5.24□□□□□ -1.57
NME1NME1 RPL9BP51401 191 aaKnown RBP5.24□□□□□ -1.57
NME1NME1 MATALPHA2P0CY08 210 aa5.23□□□□□ -1.57
NME1NME1 HMLALPHA2P0CY09 210 aa5.23□□□□□ -1.57
NME1NME1 GCN3P14741 305 aa5.23□□□□□ -1.57
NME1NME1 RGM1Q00453 211 aa5.23□□□□□ -1.57
NME1NME1 RFA3P26755 122 aaKnown RBP5.22□□□□□ -1.57
NME1NME1 IRC22P40006 225 aa5.22□□□□□ -1.57
NME1NME1 LPP1Q04396 274 aa5.22□□□□□ -1.57
NME1NME1 EMC6Q12431 108 aa5.22□□□□□ -1.57
NME1NME1 TUS1Q06412 1307 aa5.22□□□□□ -1.57
NME1NME1 PUT1P09368 476 aa5.21□□□□□ -1.58
NME1NME1 YIL001WP40560 513 aa5.21□□□□□ -1.58
NME1NME1 YNL010WP53981 241 aaKnown RBP5.2□□□□□ -1.58
NME1NME1 PRM15Q03262 622 aa5.2□□□□□ -1.58
NME1NME1 MSW1P04803 379 aa5.19□□□□□ -1.58
NME1NME1 GRX2P17695 143 aaKnown RBP5.19□□□□□ -1.58
NME1NME1 ATG22P25568 528 aa5.19□□□□□ -1.58
NME1NME1 MNN5P46982 586 aa5.19□□□□□ -1.58
NME1NME1 YCR087C-AP37263 153 aa5.18□□□□□ -1.58
NME1NME1 CDC8P00572 216 aa5.17□□□□□ -1.58
NME1NME1 SPS18P32572 300 aa5.17□□□□□ -1.58
NME1NME1 GET1P53192 235 aa5.17□□□□□ -1.58
NME1NME1 YOR062CP36025 268 aa5.16□□□□□ -1.58
NME1NME1 BMT5P40493 336 aa5.16□□□□□ -1.58
NME1NME1 TDA8Q6B2U8 126 aa5.16□□□□□ -1.58
NME1NME1 SNF6P18888 332 aa5.15□□□□□ -1.59
NME1NME1 TCA17P32613 152 aa5.15□□□□□ -1.59
NME1NME1 POP4P38336 279 aa5.15□□□□□ -1.59
NME1NME1 PSF1Q12488 208 aa5.15□□□□□ -1.59
NME1NME1 TRM5P38793 499 aa5.14□□□□□ -1.59
NME1NME1 CGI121Q03705 181 aaKnown RBP5.14□□□□□ -1.59
NME1NME1 ABP140Q08641 628 aaKnown RBP5.14□□□□□ -1.59
NME1NME1 ATO3Q12359 275 aa5.14□□□□□ -1.59
NME1NME1 GRE3P38715 327 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
NME1NME1 RMD6P39975 231 aa5.13□□□□□ -1.59
NME1NME1 ARR2Q06597 130 aa5.13□□□□□ -1.59
NME1NME1 YOR283WQ12040 230 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms