RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 TPP1Q03796 238 aa7.61□□□□□ -1.19
LSR1LSR1 HOF1Q05080 669 aa7.61□□□□□ -1.19
LSR1LSR1 ERP1Q05359 219 aaKnown RBP7.61□□□□□ -1.19
LSR1LSR1 YCT1Q12235 531 aa7.61□□□□□ -1.19
LSR1LSR1 AIM45Q12480 344 aaKnown RBP7.61□□□□□ -1.19
LSR1LSR1 COX19Q3E731 98 aa7.61□□□□□ -1.19
LSR1LSR1 YHR214C-EQ8TGK0 99 aa7.61□□□□□ -1.19
LSR1LSR1 UBA3Q99344 299 aa7.61□□□□□ -1.19
LSR1LSR1 YAL064W-BO13512 126 aa7.6□□□□□ -1.19
LSR1LSR1 YFR010W-AP0C5N0 62 aa7.6□□□□□ -1.19
LSR1LSR1 CPR5P35176 225 aa7.6□□□□□ -1.19
LSR1LSR1 FIG1P38224 298 aa7.6□□□□□ -1.19
LSR1LSR1 FAT1P38225 669 aa7.6□□□□□ -1.19
LSR1LSR1 YHR210CP38893 341 aa7.6□□□□□ -1.19
LSR1LSR1 YER010CP40011 234 aa7.6□□□□□ -1.19
LSR1LSR1 LSM4P40070 187 aaKnown RBP7.6□□□□□ -1.19
LSR1LSR1 PAU15P40585 124 aa7.6□□□□□ -1.19
LSR1LSR1 VMA21P41806 77 aa7.6□□□□□ -1.19
LSR1LSR1 CTK2P46962 323 aa7.6□□□□□ -1.19
LSR1LSR1 YJR056CP47115 236 aa7.6□□□□□ -1.19
LSR1LSR1 SKP1P52286 194 aa7.6□□□□□ -1.19
LSR1LSR1 NSA1P53136 463 aaPredicted RBP7.6□□□□□ -1.19
LSR1LSR1 NIP7Q08962 181 aaKnown RBP7.6□□□□□ -1.19
LSR1LSR1 GRE1Q08969 168 aa7.6□□□□□ -1.19
LSR1LSR1 SNF5P18480 905 aa7.59□□□□□ -1.19
LSR1LSR1 CLB6P32943 380 aa7.59□□□□□ -1.19
LSR1LSR1 SSS1P35179 80 aa7.59□□□□□ -1.19
LSR1LSR1 SDH4P37298 181 aa7.59□□□□□ -1.19
LSR1LSR1 YBR197CP38306 217 aa7.59□□□□□ -1.19
LSR1LSR1 YBR292CP38357 123 aa7.59□□□□□ -1.19
LSR1LSR1 GPP1P41277 250 aaKnown RBP7.59□□□□□ -1.19
LSR1LSR1 YJL016WP47072 561 aa7.59□□□□□ -1.19
LSR1LSR1 DAN1P47178 298 aa7.59□□□□□ -1.19
LSR1LSR1 MSY1P48527 492 aa7.59□□□□□ -1.19
LSR1LSR1 HSV2P50079 448 aaPredicted RBP7.59□□□□□ -1.19
LSR1LSR1 OCA1P50946 238 aaPredicted RBP7.59□□□□□ -1.19
LSR1LSR1 BSC5P53755 489 aa7.59□□□□□ -1.19
LSR1LSR1 HHT1P61830 136 aa7.59□□□□□ -1.19
LSR1LSR1 MAP1Q01662 387 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
LSR1LSR1 ARL3Q02804 198 aa7.59□□□□□ -1.19
LSR1LSR1 YPL108WQ02872 168 aaPredicted RBP7.59□□□□□ -1.19
LSR1LSR1 TMA23Q03525 211 aa7.59□□□□□ -1.19
LSR1LSR1 YMR253CQ04835 414 aa7.59□□□□□ -1.19
LSR1LSR1 BDS1Q08347 646 aa7.59□□□□□ -1.19
LSR1LSR1 DCN1Q12395 269 aa7.59□□□□□ -1.19
LSR1LSR1 TY1A-HP0C2I4 478 aaKnown RBP7.58□□□□□ -1.2
LSR1LSR1 RPB3P16370 318 aaKnown RBP7.58□□□□□ -1.2
LSR1LSR1 YKR073CP36153 106 aa7.58□□□□□ -1.2
LSR1LSR1 TRS20P38334 175 aa7.58□□□□□ -1.2
LSR1LSR1 SUR2P38992 349 aa7.58□□□□□ -1.2
LSR1LSR1 RFC2P40348 353 aa7.58□□□□□ -1.2
LSR1LSR1 ATF1P40353 525 aa7.58□□□□□ -1.2
LSR1LSR1 XBP1P40489 647 aa7.58□□□□□ -1.2
LSR1LSR1 MOB2P43563 287 aa7.58□□□□□ -1.2
LSR1LSR1 GNA1P43577 159 aaPredicted RBP7.58□□□□□ -1.2
LSR1LSR1 YJR011CP47086 261 aaPredicted RBP7.58□□□□□ -1.2
LSR1LSR1 PGU1P47180 361 aa7.58□□□□□ -1.2
LSR1LSR1 PMT3P47190 753 aa7.58□□□□□ -1.2
LSR1LSR1 PEF1P53238 335 aa7.58□□□□□ -1.2
LSR1LSR1 VPS28Q02767 242 aa7.58□□□□□ -1.2
LSR1LSR1 SRP1Q02821 542 aaKnown RBP7.58□□□□□ -1.2
LSR1LSR1 CDC39P25655 2108 aaKnown RBP7.57□□□□□ -1.2
LSR1LSR1 COX1P00401 534 aa7.57□□□□□ -1.2
LSR1LSR1 COX5BP00425 151 aa7.57□□□□□ -1.2
LSR1LSR1 CDC36P06100 191 aaPredicted RBP7.57□□□□□ -1.2
LSR1LSR1 MET3P08536 511 aa7.57□□□□□ -1.2
LSR1LSR1 YLL053CP0CD98 152 aa7.57□□□□□ -1.2
LSR1LSR1 UTH1P36135 365 aa7.57□□□□□ -1.2
LSR1LSR1 AIM3P38266 947 aaKnown RBP7.57□□□□□ -1.2
LSR1LSR1 YEA4P40004 342 aa7.57□□□□□ -1.2
LSR1LSR1 SLM1P40485 686 aa7.57□□□□□ -1.2
LSR1LSR1 AIR1P40507 360 aaKnown RBP7.57□□□□□ -1.2
LSR1LSR1 MGA1P53050 456 aa7.57□□□□□ -1.2
LSR1LSR1 ERV14P53173 138 aa7.57□□□□□ -1.2
LSR1LSR1 PCP1P53259 346 aa7.57□□□□□ -1.2
LSR1LSR1 YNR066CP53752 436 aa7.57□□□□□ -1.2
LSR1LSR1 YIF1P53845 314 aaKnown RBP7.57□□□□□ -1.2
LSR1LSR1 SKO1Q02100 647 aa7.57□□□□□ -1.2
LSR1LSR1 MEH1Q02205 184 aa7.57□□□□□ -1.2
LSR1LSR1 GIS1Q03833 894 aa7.57□□□□□ -1.2
LSR1LSR1 PML1Q07930 204 aaPredicted RBP7.57□□□□□ -1.2
LSR1LSR1 BLM10P43583 2143 aa7.57□□□□□ -1.2
LSR1LSR1 VMA3P25515 160 aa7.56□□□□□ -1.2
LSR1LSR1 PEX4P29340 183 aa7.56□□□□□ -1.2
LSR1LSR1 SWD2P36104 329 aaPredicted RBP7.56□□□□□ -1.2
LSR1LSR1 YND1P40009 630 aa7.56□□□□□ -1.2
LSR1LSR1 NIT2P47016 307 aa7.56□□□□□ -1.2
LSR1LSR1 AVT4P50944 713 aa7.56□□□□□ -1.2
LSR1LSR1 YPL039WQ03080 316 aa7.56□□□□□ -1.2
LSR1LSR1 ASM4Q05166 528 aa7.56□□□□□ -1.2
LSR1LSR1 MRX9Q07349 420 aaKnown RBP7.56□□□□□ -1.2
LSR1LSR1 YLR118CQ12354 227 aa7.56□□□□□ -1.2
LSR1LSR1 HUT1Q12520 339 aa7.56□□□□□ -1.2
LSR1LSR1 COA6Q3E846 104 aa7.56□□□□□ -1.2
LSR1LSR1 SEC16P48415 2195 aaKnown RBP7.56□□□□□ -1.2
LSR1LSR1 CDC28P00546 298 aaKnown RBP7.55□□□□□ -1.2
LSR1LSR1 SPO7P18410 259 aa7.55□□□□□ -1.2
LSR1LSR1 OLE1P21147 510 aaKnown RBP7.55□□□□□ -1.2
LSR1LSR1 LAC1P28496 418 aa7.55□□□□□ -1.2
LSR1LSR1 MRPS9P38120 278 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 88.3 ms