RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 OLIG1Q8TAK6 271 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 ARID3AQ99856 593 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 SYT11Q9BT88 431 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 OSBPL7Q9BZF2 842 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 PLEKHA5Q9HAU0 1116 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 ADAMTS1Q9UHI8 967 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 NUB1Q9Y5A7 615 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 TRIP11Q15643 1979 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 ABL1P00519 1130 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 MYL6P60660 151 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 FAM26DQ5JW98 314 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 CD302Q8IX05 232 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 C1orf127Q8N9H9 656 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 SNX27Q96L92 541 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 CXCL16Q9H2A7 254 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 SIX4Q9UIU6 781 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 C2CD2Q9Y426 696 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 UMODL1Q5DID0 1318 aa24.94■■□□□ 1.58
SDF4-202ENST00000360001 RCCD1A6NED2 376 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 ARVCFO00192 962 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 OFD1O75665 1012 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 ANXA13P27216 316 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 TMEM132DQ14C87 1099 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.93■■□□□ 1.58
SDF4-202ENST00000360001 IMPG2Q9BZV3 1241 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 RNF208Q9H0X6 261 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 AGO3Q9H9G7 860 aaKnown RBP24.93■■□□□ 1.58
SDF4-202ENST00000360001 TFR2Q9UP52 801 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 PCDHA13Q9Y5I0 950 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 TRPC3Q13507 836 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 CUL2Q13617 745 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 FBXO47Q5MNV8 452 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 ZNF662Q6ZS27 426 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 NT5DC4Q86YG4 428 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 TMEM130Q8N3G9 435 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 CXorf38Q8TB03 319 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 IFIH1Q9BYX4 1025 aaKnown RBP24.93■■□□□ 1.58
SDF4-202ENST00000360001 XYLT2Q9H1B5 865 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 OGDHLQ9ULD0 1010 aa24.93■■□□□ 1.58
SDF4-202ENST00000360001 RECQL4O94761 1208 aa24.92■■□□□ 1.58
SDF4-202ENST00000360001 USP8P40818 1118 aa24.92■■□□□ 1.58
SDF4-202ENST00000360001 VAV2P52735 878 aa24.92■■□□□ 1.58
SDF4-202ENST00000360001 NFX1Q12986 1120 aaKnown RBP24.92■■□□□ 1.58
SDF4-202ENST00000360001 SGSM1Q2NKQ1 1148 aa24.92■■□□□ 1.58
SDF4-202ENST00000360001 TWF2Q6IBS0 349 aaKnown RBP24.92■■□□□ 1.58
SDF4-202ENST00000360001 ALKAL1Q6UXT8 129 aa24.92■■□□□ 1.58
SDF4-202ENST00000360001 KIAA1328Q86T90 577 aa24.92■■□□□ 1.58
SDF4-202ENST00000360001 CAND2O75155 1236 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 AKAP5P24588 427 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 YARSP54577 528 aaKnown RBP24.91■■□□□ 1.58
SDF4-202ENST00000360001 ARHGAP29Q52LW3 1261 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 SMG8Q8ND04 991 aaKnown RBP24.91■■□□□ 1.58
SDF4-202ENST00000360001 KIF12Q96FN5 646 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 ZMAT2Q96NC0 199 aaKnown RBP24.91■■□□□ 1.58
SDF4-202ENST00000360001 LACRTQ9GZZ8 138 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 ERVK-5Q9HDB9 667 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 IPPQ9Y573 584 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 KIF2AO00139 706 aaPredicted RBP24.91■■□□□ 1.58
SDF4-202ENST00000360001 GPR182O15218 404 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 CYP26A1O43174 497 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 ETF1P62495 437 aaKnown RBP24.91■■□□□ 1.58
SDF4-202ENST00000360001 BMS1Q14692 1282 aaKnown RBP24.91■■□□□ 1.58
SDF4-202ENST00000360001 LPIN1Q14693 890 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 ZNF618Q5T7W0 954 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 JAKMIP2Q96AA8 810 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 APOL6Q9BWW8 343 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 RNF39Q9H2S5 420 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 CHST12Q9NRB3 414 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 TRIM10Q9UDY6 481 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 NENFQ9UMX5 172 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 DERAQ9Y315 318 aa24.91■■□□□ 1.58
SDF4-202ENST00000360001 DDX3XO00571 662 aaKnown RBP eCLIP24.9■■□□□ 1.582e-11■■■■■ 29.8
SDF4-202ENST00000360001 ITGB3P05106 788 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 GHRP10912 638 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 ACO1P21399 889 aaKnown RBP24.9■■□□□ 1.58
SDF4-202ENST00000360001 TBXAS1P24557 533 aaPredicted RBP24.9■■□□□ 1.58
SDF4-202ENST00000360001 MAGEA1P43355 309 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 CDK7P50613 346 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 VPS36Q86VN1 386 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 SLC30A5Q8TAD4 765 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 LNX1Q8TBB1 728 aaPredicted RBP24.9■■□□□ 1.58
SDF4-202ENST00000360001 IRX2Q9BZI1 471 aaPredicted RBP24.9■■□□□ 1.58
SDF4-202ENST00000360001 CNTN3Q9P232 1028 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 PADI3Q9ULW8 664 aa24.9■■□□□ 1.58
SDF4-202ENST00000360001 SGPL1O95470 568 aa24.89■■□□□ 1.58
SDF4-202ENST00000360001 CKBP12277 381 aa24.89■■□□□ 1.58
SDF4-202ENST00000360001 CD52P31358 61 aa24.89■■□□□ 1.58
SDF4-202ENST00000360001 ZNF699Q32M78 642 aa24.89■■□□□ 1.58
SDF4-202ENST00000360001 EPS8L1Q8TE68 723 aa24.89■■□□□ 1.58
SDF4-202ENST00000360001 PDCD11Q14690 1871 aaKnown RBP24.89■■□□□ 1.58
SDF4-202ENST00000360001 TUBB4AP04350 444 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 KRT19P08727 400 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 GUCY2FP51841 1108 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 ZBTB6Q15916 424 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 TRAF7Q6Q0C0 670 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.89■■□□□ 1.57
SDF4-202ENST00000360001 SLC20A1Q8WUM9 679 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 TAF4BQ92750 862 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 SEZ6LQ9BYH1 1024 aa24.89■■□□□ 1.57
SDF4-202ENST00000360001 NIF3L1Q9GZT8 377 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms