RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YDR124WQ04608 324 aa-0.63□□□□□ -2.51
snR56snR56 RRG8Q06109 277 aa-0.63□□□□□ -2.51
snR56snR56 ATG39Q06159 398 aa-0.63□□□□□ -2.51
snR56snR56 RPL27BP0C2H7 136 aaKnown RBP-0.64□□□□□ -2.51
snR56snR56 VPS45P38932 577 aa-0.65□□□□□ -2.51
snR56snR56 YDL180WQ12301 547 aa-0.65□□□□□ -2.51
snR56snR56 CSM1P25651 190 aa-0.66□□□□□ -2.52
snR56snR56 MRX3P38172 270 aa-0.66□□□□□ -2.52
snR56snR56 RRF1P38771 230 aa-0.66□□□□□ -2.52
snR56snR56 MRH4P53166 561 aa-0.66□□□□□ -2.52
snR56snR56 SME1Q12330 94 aaPredicted RBP-0.66□□□□□ -2.52
snR56snR56 YRB2P40517 327 aa-0.67□□□□□ -2.52
snR56snR56 CUS2P53830 285 aaPredicted RBP-0.67□□□□□ -2.52
snR56snR56 ERP4Q12450 207 aa-0.67□□□□□ -2.52
snR56snR56 YPT52P36018 234 aaKnown RBP-0.68□□□□□ -2.52
snR56snR56 RMR1P53060 241 aa-0.68□□□□□ -2.52
snR56snR56 RCF1Q03713 159 aa-0.68□□□□□ -2.52
snR56snR56 SYC1Q08553 188 aaPredicted RBP-0.68□□□□□ -2.52
snR56snR56 YPL257WQ08974 193 aa-0.68□□□□□ -2.52
snR56snR56 YCT1Q12235 531 aa-0.68□□□□□ -2.52
snR56snR56 MET5P47169 1442 aa-0.69□□□□□ -2.52
snR56snR56 HSM3P38348 480 aa-0.69□□□□□ -2.52
snR56snR56 SAY1P53324 424 aa-0.69□□□□□ -2.52
snR56snR56 ABZ2Q03266 374 aa-0.69□□□□□ -2.52
snR56snR56 GOT1Q03554 138 aa-0.69□□□□□ -2.52
snR56snR56 MSH5Q12175 901 aa-0.69□□□□□ -2.52
snR56snR56 FRS2P15625 503 aaKnown RBP-0.7□□□□□ -2.52
snR56snR56 VPS21P36017 210 aaKnown RBP-0.7□□□□□ -2.52
snR56snR56 YAE1P47118 141 aaPredicted RBP-0.7□□□□□ -2.52
snR56snR56 GPI8P49018 411 aa-0.7□□□□□ -2.52
snR56snR56 YPR172WQ06608 200 aa-0.7□□□□□ -2.52
snR56snR56 YJR056CP47115 236 aa-0.71□□□□□ -2.52
snR56snR56 CUR1Q06469 252 aa-0.71□□□□□ -2.52
snR56snR56 YHR139C-AO13536 103 aa-0.72□□□□□ -2.52
snR56snR56 EDC3P39998 551 aaKnown RBP-0.72□□□□□ -2.52
snR56snR56 AIF1P52923 378 aa-0.72□□□□□ -2.52
snR56snR56 LSB1P53281 241 aa-0.72□□□□□ -2.52
snR56snR56 POP3P53833 195 aaPredicted RBP-0.72□□□□□ -2.52
snR56snR56 UGX2P32772 223 aa-0.73□□□□□ -2.53
snR56snR56 JEN1P36035 616 aa-0.73□□□□□ -2.53
snR56snR56 PGD1P40356 397 aa-0.73□□□□□ -2.53
snR56snR56 DSN1P40568 576 aa-0.73□□□□□ -2.53
snR56snR56 ERJ5P43613 295 aaPredicted RBP-0.73□□□□□ -2.53
snR56snR56 BCP1Q06338 283 aa-0.73□□□□□ -2.53
snR56snR56 EHD3P28817 500 aa-0.74□□□□□ -2.53
snR56snR56 FLX1P40464 311 aa-0.74□□□□□ -2.53
snR56snR56 RPA43P46669 326 aa-0.74□□□□□ -2.53
snR56snR56 SPG3Q04398 127 aaPredicted RBP-0.74□□□□□ -2.53
snR56snR56 YPR147CQ06522 304 aaKnown RBP-0.74□□□□□ -2.53
snR56snR56 TFC1P32367 649 aa-0.75□□□□□ -2.53
snR56snR56 SIP3P38717 1229 aa-0.75□□□□□ -2.53
snR56snR56 YHL042WP38729 150 aa-0.75□□□□□ -2.53
snR56snR56 ARO8P53090 500 aaKnown RBP-0.75□□□□□ -2.53
snR56snR56 SED1Q01589 338 aa-0.75□□□□□ -2.53
snR56snR56 SNF8Q12483 233 aa-0.75□□□□□ -2.53
snR56snR56 ECM33P38248 429 aaKnown RBP-0.76□□□□□ -2.53
snR56snR56 YAR068WP39564 161 aa-0.76□□□□□ -2.53
snR56snR56 THO1P40040 218 aaKnown RBP-0.76□□□□□ -2.53
snR56snR56 LOC1P43586 204 aaPredicted RBP-0.76□□□□□ -2.53
snR56snR56 PDR18P53756 1333 aa-0.77□□□□□ -2.53
snR56snR56 CDC8P00572 216 aa-0.77□□□□□ -2.53
snR56snR56 NOP13P53883 403 aaKnown RBP RIP-Chip data-0.77□□□□□ -2.53not detected
snR56snR56 DIG2Q03373 323 aaKnown RBP-0.77□□□□□ -2.53
snR56snR56 RCE1Q03530 315 aa-0.77□□□□□ -2.53
snR56snR56 YOR186WQ08560 144 aa-0.77□□□□□ -2.53
snR56snR56 YSR3P23501 404 aa-0.78□□□□□ -2.53
snR56snR56 RPF1P38805 295 aaKnown RBP-0.78□□□□□ -2.53
snR56snR56 YEA4P40004 342 aa-0.78□□□□□ -2.53
snR56snR56 SNZ3P43545 298 aa-0.78□□□□□ -2.53
snR56snR56 DOC1P53068 250 aa-0.78□□□□□ -2.53
snR56snR56 NIP7Q08962 181 aaKnown RBP-0.78□□□□□ -2.53
snR56snR56 MEP1P40260 492 aa-0.79□□□□□ -2.54
snR56snR56 YNR077CP53758 84 aa-0.79□□□□□ -2.54
snR56snR56 YNL260CP53846 198 aa-0.79□□□□□ -2.54
snR56snR56 CWC27Q02770 301 aa-0.79□□□□□ -2.54
snR56snR56 HTL1Q9URQ5 78 aa-0.79□□□□□ -2.54
snR56snR56 YKR104WP0CE69 306 aa-0.8□□□□□ -2.54
snR56snR56 PRO2P54885 456 aaKnown RBP-0.8□□□□□ -2.54
snR56snR56 COQ10Q08058 207 aa-0.8□□□□□ -2.54
snR56snR56 GCD2P12754 651 aaPredicted RBP-0.81□□□□□ -2.54
snR56snR56 STP22P25604 385 aa-0.81□□□□□ -2.54
snR56snR56 KNH1P50112 268 aa-0.81□□□□□ -2.54
snR56snR56 ATG17Q06410 417 aa-0.81□□□□□ -2.54
snR56snR56 PEX17P40155 199 aa-0.82□□□□□ -2.54
snR56snR56 RSM25P40496 264 aa-0.82□□□□□ -2.54
snR56snR56 YJR012CP47087 207 aa-0.82□□□□□ -2.54
snR56snR56 YKL070WP36087 169 aa-0.83□□□□□ -2.54
snR56snR56 SPO19Q03029 223 aa-0.83□□□□□ -2.54
snR56snR56 GAS3Q03655 524 aa-0.83□□□□□ -2.54
snR56snR56 TRM12Q04235 462 aa-0.83□□□□□ -2.54
snR56snR56 YNL247WP53852 767 aaKnown RBP-0.84□□□□□ -2.54
snR56snR56 MGR3Q04472 501 aa-0.84□□□□□ -2.54
snR56snR56 RRP40Q08285 240 aaKnown RBP-0.84□□□□□ -2.54
snR56snR56 YOR020W-AQ3E824 90 aa-0.84□□□□□ -2.54
snR56snR56 IPP1P00817 287 aaKnown RBP-0.85□□□□□ -2.55
snR56snR56 FCY2P17064 533 aa-0.85□□□□□ -2.55
snR56snR56 VPS3P23643 1011 aa-0.85□□□□□ -2.55
snR56snR56 QRI5P32344 111 aa-0.85□□□□□ -2.55
snR56snR56 YET1P35723 206 aa-0.85□□□□□ -2.55
snR56snR56 PSF1Q12488 208 aa-0.85□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms