RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B EHD3P28817 500 aa-0.69□□□□□ -2.52
snR39BsnR39B FZO1P38297 855 aa-0.69□□□□□ -2.52
snR39BsnR39B TDA11P38854 504 aa-0.69□□□□□ -2.52
snR39BsnR39B JEM1P40358 645 aa-0.69□□□□□ -2.52
snR39BsnR39B AIM20P40451 204 aa-0.69□□□□□ -2.52
snR39BsnR39B AGP3P43548 558 aa-0.69□□□□□ -2.52
snR39BsnR39B ERJ5P43613 295 aaPredicted RBP-0.69□□□□□ -2.52
snR39BsnR39B MNT4P53745 580 aa-0.69□□□□□ -2.52
snR39BsnR39B ABZ2Q03266 374 aa-0.69□□□□□ -2.52
snR39BsnR39B SIA1Q12212 622 aa-0.69□□□□□ -2.52
snR39BsnR39B CAR2P07991 424 aaKnown RBP-0.7□□□□□ -2.52
snR39BsnR39B ICL1P28240 557 aaPredicted RBP-0.7□□□□□ -2.52
snR39BsnR39B MRX3P38172 270 aa-0.7□□□□□ -2.52
snR39BsnR39B YIL102CP40488 101 aa-0.7□□□□□ -2.52
snR39BsnR39B YNR077CP53758 84 aa-0.7□□□□□ -2.52
snR39BsnR39B CDC36P06100 191 aaPredicted RBP-0.71□□□□□ -2.52
snR39BsnR39B POF1P25576 258 aa-0.71□□□□□ -2.52
snR39BsnR39B YPT52P36018 234 aaKnown RBP-0.71□□□□□ -2.52
snR39BsnR39B JEN1P36035 616 aa-0.71□□□□□ -2.52
snR39BsnR39B HIS2P38635 335 aa-0.71□□□□□ -2.52
snR39BsnR39B MNN9P39107 395 aaKnown RBP-0.71□□□□□ -2.52
snR39BsnR39B FIS1P40515 155 aa-0.71□□□□□ -2.52
snR39BsnR39B RPA43P46669 326 aa-0.71□□□□□ -2.52
snR39BsnR39B KNH1P50112 268 aa-0.71□□□□□ -2.52
snR39BsnR39B DOC1P53068 250 aa-0.71□□□□□ -2.52
snR39BsnR39B PDR16P53860 351 aaKnown RBP-0.71□□□□□ -2.52
snR39BsnR39B NOP13P53883 403 aaKnown RBP RIP-Chip data-0.71□□□□□ -2.52not detected
snR39BsnR39B EOS1P53938 366 aa-0.71□□□□□ -2.52
snR39BsnR39B YMR252CQ04814 134 aa-0.71□□□□□ -2.52
snR39BsnR39B ATG39Q06159 398 aa-0.71□□□□□ -2.52
snR39BsnR39B ARV1Q06541 321 aa-0.71□□□□□ -2.52
snR39BsnR39B YCT1Q12235 531 aa-0.71□□□□□ -2.52
snR39BsnR39B YCL042WP25572 119 aa-0.72□□□□□ -2.52
snR39BsnR39B LAS1P36146 502 aaPredicted RBP-0.72□□□□□ -2.52
snR39BsnR39B YEL008WP40001 126 aa-0.72□□□□□ -2.52
snR39BsnR39B RIB4P50861 169 aaPredicted RBP-0.72□□□□□ -2.52
snR39BsnR39B RMR1P53060 241 aa-0.72□□□□□ -2.52
snR39BsnR39B CPD1P53314 239 aa-0.72□□□□□ -2.52
snR39BsnR39B YPR172WQ06608 200 aa-0.72□□□□□ -2.52
snR39BsnR39B COQ10Q08058 207 aa-0.72□□□□□ -2.52
snR39BsnR39B YOR029WQ12243 111 aa-0.72□□□□□ -2.52
snR39BsnR39B ILV1P00927 576 aaKnown RBP-0.73□□□□□ -2.53
snR39BsnR39B ECM33P38248 429 aaKnown RBP-0.73□□□□□ -2.53
snR39BsnR39B GLG2P47011 380 aa-0.73□□□□□ -2.53
snR39BsnR39B YJR056CP47115 236 aa-0.73□□□□□ -2.53
snR39BsnR39B MRH4P53166 561 aa-0.73□□□□□ -2.53
snR39BsnR39B YLR460CP54007 376 aa-0.73□□□□□ -2.53
snR39BsnR39B GAS3Q03655 524 aa-0.73□□□□□ -2.53
snR39BsnR39B TRM12Q04235 462 aa-0.73□□□□□ -2.53
snR39BsnR39B GPN3Q06543 272 aa-0.73□□□□□ -2.53
snR39BsnR39B CDC8P00572 216 aa-0.74□□□□□ -2.53
snR39BsnR39B VMA22P38784 181 aa-0.74□□□□□ -2.53
snR39BsnR39B NAS2P40555 220 aa-0.74□□□□□ -2.53
snR39BsnR39B HYR1P40581 163 aaKnown RBP-0.74□□□□□ -2.53
snR39BsnR39B YFH7P43591 353 aa-0.74□□□□□ -2.53
snR39BsnR39B LOH1P47055 219 aa-0.74□□□□□ -2.53
snR39BsnR39B YDR124WQ04608 324 aa-0.74□□□□□ -2.53
snR39BsnR39B BER1Q06688 274 aaKnown RBP-0.74□□□□□ -2.53
snR39BsnR39B YHR007C-AQ07074 71 aa-0.74□□□□□ -2.53
snR39BsnR39B CDC37P06101 506 aaKnown RBP-0.75□□□□□ -2.53
snR39BsnR39B GPI12P23797 304 aa-0.75□□□□□ -2.53
snR39BsnR39B OPY1P38271 328 aa-0.75□□□□□ -2.53
snR39BsnR39B YBR209WP38311 105 aa-0.75□□□□□ -2.53
snR39BsnR39B RPF1P38805 295 aaKnown RBP-0.75□□□□□ -2.53
snR39BsnR39B RSM25P40496 264 aa-0.75□□□□□ -2.53
snR39BsnR39B NIP7Q08962 181 aaKnown RBP-0.75□□□□□ -2.53
snR39BsnR39B YPL257WQ08974 193 aa-0.75□□□□□ -2.53
snR39BsnR39B YPR203WQ08994 102 aa-0.75□□□□□ -2.53
snR39BsnR39B CCW12Q12127 133 aa-0.75□□□□□ -2.53
snR39BsnR39B PER33Q12144 273 aa-0.75□□□□□ -2.53
snR39BsnR39B COA3Q3E7B2 85 aa-0.75□□□□□ -2.53
snR39BsnR39B STH1P32597 1359 aa-0.75□□□□□ -2.53
snR39BsnR39B SIR2P06700 562 aa-0.76□□□□□ -2.53
snR39BsnR39B END3P39013 349 aa-0.76□□□□□ -2.53
snR39BsnR39B THO1P40040 218 aaKnown RBP-0.76□□□□□ -2.53
snR39BsnR39B MGA1P53050 456 aa-0.76□□□□□ -2.53
snR39BsnR39B SYC1Q08553 188 aaPredicted RBP-0.76□□□□□ -2.53
snR39BsnR39B YOR186WQ08560 144 aa-0.76□□□□□ -2.53
snR39BsnR39B SME1Q12330 94 aaPredicted RBP-0.76□□□□□ -2.53
snR39BsnR39B PSF1Q12488 208 aa-0.76□□□□□ -2.53
snR39BsnR39B TAO3P40468 2376 aa-0.76□□□□□ -2.53
snR39BsnR39B FRS2P15625 503 aaKnown RBP-0.77□□□□□ -2.53
snR39BsnR39B SMI1P32566 505 aa-0.77□□□□□ -2.53
snR39BsnR39B SWE1P32944 819 aa-0.77□□□□□ -2.53
snR39BsnR39B YET1P35723 206 aa-0.77□□□□□ -2.53
snR39BsnR39B MRPL15P36523 253 aa-0.77□□□□□ -2.53
snR39BsnR39B YAR068WP39564 161 aa-0.77□□□□□ -2.53
snR39BsnR39B KAP114P53067 1004 aa-0.77□□□□□ -2.53
snR39BsnR39B LSB1P53281 241 aa-0.77□□□□□ -2.53
snR39BsnR39B ALG11P53954 548 aaKnown RBP-0.77□□□□□ -2.53
snR39BsnR39B GOT1Q03554 138 aa-0.77□□□□□ -2.53
snR39BsnR39B HSM3P38348 480 aa-0.78□□□□□ -2.53
snR39BsnR39B YHL037CP38733 133 aa-0.78□□□□□ -2.53
snR39BsnR39B DSN1P40568 576 aa-0.78□□□□□ -2.53
snR39BsnR39B SNZ3P43545 298 aa-0.78□□□□□ -2.53
snR39BsnR39B YDR391CQ04170 232 aa-0.78□□□□□ -2.53
snR39BsnR39B YPR147CQ06522 304 aaKnown RBP-0.78□□□□□ -2.53
snR39BsnR39B VAC14Q06708 880 aa-0.78□□□□□ -2.53
snR39BsnR39B ERP4Q12450 207 aa-0.78□□□□□ -2.53
snR39BsnR39B YPL229WQ99395 206 aa-0.78□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 181 ms