RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C SET6Q12529 373 aa5.33□□□□□ -1.56
VPS4YPR173C MRPL44P19956 98 aa5.32□□□□□ -1.56
VPS4YPR173C NUP1P20676 1076 aa5.32□□□□□ -1.56
VPS4YPR173C RFA1P22336 621 aaKnown RBP5.32□□□□□ -1.56
VPS4YPR173C PPH21P23594 369 aa5.32□□□□□ -1.56
VPS4YPR173C NTF2P33331 125 aaKnown RBP5.32□□□□□ -1.56
VPS4YPR173C YBR013CP38215 129 aa5.32□□□□□ -1.56
VPS4YPR173C RFC2P40348 353 aa5.32□□□□□ -1.56
VPS4YPR173C MPA43P53583 542 aaPredicted RBP5.32□□□□□ -1.56
VPS4YPR173C MPP6P53725 186 aaPredicted RBP5.32□□□□□ -1.56
VPS4YPR173C YIF1P53845 314 aaKnown RBP5.32□□□□□ -1.56
VPS4YPR173C OCA2P53949 197 aa5.32□□□□□ -1.56
VPS4YPR173C MRPS17Q03246 237 aaPredicted RBP5.32□□□□□ -1.56
VPS4YPR173C YDR248CQ03786 193 aa5.32□□□□□ -1.56
VPS4YPR173C CAB5Q03941 241 aa5.32□□□□□ -1.56
VPS4YPR173C RTT103Q05543 409 aa5.32□□□□□ -1.56
VPS4YPR173C YOR352WQ08816 343 aa5.32□□□□□ -1.56
VPS4YPR173C VAM3Q12241 283 aa5.32□□□□□ -1.56
VPS4YPR173C RPS13P05756 151 aaKnown RBP5.31□□□□□ -1.56
VPS4YPR173C HIS5P07172 385 aa5.31□□□□□ -1.56
VPS4YPR173C QCR2P07257 368 aa5.31□□□□□ -1.56
VPS4YPR173C GAL7P08431 366 aa5.31□□□□□ -1.56
VPS4YPR173C SPT15P13393 240 aaKnown RBP5.31□□□□□ -1.56
VPS4YPR173C LAC1P28496 418 aa5.31□□□□□ -1.56
VPS4YPR173C SCM4P32564 187 aa5.31□□□□□ -1.56
VPS4YPR173C PTR2P32901 601 aa5.31□□□□□ -1.56
VPS4YPR173C PAD1P33751 242 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
VPS4YPR173C UMP1P38293 148 aa5.31□□□□□ -1.56
VPS4YPR173C SSH1P38353 490 aaKnown RBP5.31□□□□□ -1.56
VPS4YPR173C RRP3P38712 501 aaKnown RBP5.31□□□□□ -1.56
VPS4YPR173C YEA6P39953 335 aa5.31□□□□□ -1.56
VPS4YPR173C YEA4P40004 342 aa5.31□□□□□ -1.56
VPS4YPR173C SLZ1P40167 298 aa5.31□□□□□ -1.56
VPS4YPR173C BUD8P41698 603 aa5.31□□□□□ -1.56
VPS4YPR173C TAX4P47030 604 aa5.31□□□□□ -1.56
VPS4YPR173C MGA1P53050 456 aa5.31□□□□□ -1.56
VPS4YPR173C YGL114WP53134 725 aa5.31□□□□□ -1.56
VPS4YPR173C AQR1P53943 586 aa5.31□□□□□ -1.56
VPS4YPR173C CUE4Q04201 117 aaPredicted RBP5.31□□□□□ -1.56
VPS4YPR173C MRPL1Q04599 285 aa5.31□□□□□ -1.56
VPS4YPR173C ERP1Q05359 219 aaKnown RBP5.31□□□□□ -1.56
VPS4YPR173C COQ10Q08058 207 aa5.31□□□□□ -1.56
VPS4YPR173C HRT1Q08273 121 aa5.31□□□□□ -1.56
VPS4YPR173C LEU9Q12166 604 aaKnown RBP5.31□□□□□ -1.56
VPS4YPR173C MCT1Q12283 360 aa5.31□□□□□ -1.56
VPS4YPR173C YDR262WQ12331 272 aa5.31□□□□□ -1.56
VPS4YPR173C CTA1P15202 515 aa5.3□□□□□ -1.56
VPS4YPR173C FAA1P30624 700 aaKnown RBP5.3□□□□□ -1.56
VPS4YPR173C ERG3P32353 365 aa5.3□□□□□ -1.56
VPS4YPR173C SPC29P33419 253 aa5.3□□□□□ -1.56
VPS4YPR173C EHT1P38295 451 aa5.3□□□□□ -1.56
VPS4YPR173C TRS20P38334 175 aa5.3□□□□□ -1.56
VPS4YPR173C SUR2P38992 349 aa5.3□□□□□ -1.56
VPS4YPR173C FMP10P40098 244 aa5.3□□□□□ -1.56
VPS4YPR173C YIL067CP40514 678 aa5.3□□□□□ -1.56
VPS4YPR173C TPC1P53257 314 aa5.3□□□□□ -1.56
VPS4YPR173C FHN1P53279 174 aa5.3□□□□□ -1.56
VPS4YPR173C PBP1P53297 722 aaKnown RBP5.3□□□□□ -1.56
VPS4YPR173C RHO3Q00245 231 aaKnown RBP5.3□□□□□ -1.56
VPS4YPR173C EGD1Q02642 157 aaKnown RBP5.3□□□□□ -1.56
VPS4YPR173C ADD37Q03233 198 aa5.3□□□□□ -1.56
VPS4YPR173C CTR3Q06686 241 aa5.3□□□□□ -1.56
VPS4YPR173C MRX9Q07349 420 aaKnown RBP5.3□□□□□ -1.56
VPS4YPR173C THI73Q07904 523 aa5.3□□□□□ -1.56
VPS4YPR173C BSC6Q08280 497 aa5.3□□□□□ -1.56
VPS4YPR173C SRL2Q12020 392 aa5.3□□□□□ -1.56
VPS4YPR173C YCT1Q12235 531 aa5.3□□□□□ -1.56
VPS4YPR173C YLR118CQ12354 227 aa5.3□□□□□ -1.56
VPS4YPR173C NPC2Q12408 173 aa5.3□□□□□ -1.56
VPS4YPR173C CCH1P50077 2039 aa5.3□□□□□ -1.56
VPS4YPR173C OPI3P05375 206 aa5.29□□□□□ -1.56
VPS4YPR173C CBP6P07253 162 aaPredicted RBP5.29□□□□□ -1.56
VPS4YPR173C RPL20AP0CX23 172 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C RPL20BP0CX24 172 aaPredicted RBP5.29□□□□□ -1.56
VPS4YPR173C OLE1P21147 510 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C CPR2P23285 205 aa5.29□□□□□ -1.56
VPS4YPR173C POP5P28005 173 aa5.29□□□□□ -1.56
VPS4YPR173C ARO4P32449 370 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C MTC7P32633 139 aa5.29□□□□□ -1.56
VPS4YPR173C FMP46P36141 133 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C MRPL28P36527 147 aa5.29□□□□□ -1.56
VPS4YPR173C FAT1P38225 669 aa5.29□□□□□ -1.56
VPS4YPR173C YBR292CP38357 123 aa5.29□□□□□ -1.56
VPS4YPR173C FLX1P40464 311 aa5.29□□□□□ -1.56
VPS4YPR173C YIL108WP40483 696 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C GPP1P41277 250 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C AVT4P50944 713 aa5.29□□□□□ -1.56
VPS4YPR173C YGL262WP53054 175 aa5.29□□□□□ -1.56
VPS4YPR173C YGL185CP53100 379 aa5.29□□□□□ -1.56
VPS4YPR173C RMD9P53140 646 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C YGR066CP53242 292 aa5.29□□□□□ -1.56
VPS4YPR173C YNR066CP53752 436 aa5.29□□□□□ -1.56
VPS4YPR173C PDR16P53860 351 aaKnown RBP5.29□□□□□ -1.56
VPS4YPR173C NRG1Q03125 231 aa5.29□□□□□ -1.56
VPS4YPR173C GMC1Q04399 608 aa5.29□□□□□ -1.56
VPS4YPR173C AVO2Q04749 426 aa5.29□□□□□ -1.56
VPS4YPR173C ASM4Q05166 528 aa5.29□□□□□ -1.56
VPS4YPR173C YLR456WQ06199 204 aa5.29□□□□□ -1.56
VPS4YPR173C ARR2Q06597 130 aa5.29□□□□□ -1.56
VPS4YPR173C MHR1Q06630 226 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms