RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C YOR186WQ08560 144 aa2.23□□□□□ -2.05
CCL1YPR025C CSM4Q08955 156 aa2.23□□□□□ -2.05
CCL1YPR025C YOR283WQ12040 230 aaKnown RBP2.23□□□□□ -2.05
CCL1YPR025C YLR462WO13556 202 aa2.22□□□□□ -2.05
CCL1YPR025C SCM4P32564 187 aa2.22□□□□□ -2.05
CCL1YPR025C SRB4P32569 687 aa2.22□□□□□ -2.05
CCL1YPR025C YEL075CP39972 122 aa2.22□□□□□ -2.05
CCL1YPR025C HOC1P47124 396 aa2.22□□□□□ -2.05
CCL1YPR025C DAN1P47178 298 aa2.22□□□□□ -2.05
CCL1YPR025C PGA2P53903 129 aa2.22□□□□□ -2.05
CCL1YPR025C SCO1P23833 295 aa2.21□□□□□ -2.06
CCL1YPR025C YHR127WP38833 243 aaKnown RBP2.21□□□□□ -2.06
CCL1YPR025C SNX4P47057 423 aa2.21□□□□□ -2.06
CCL1YPR025C CDC36P06100 191 aaPredicted RBP2.2□□□□□ -2.06
CCL1YPR025C YHR032W-AP0C5N6 59 aa2.2□□□□□ -2.06
CCL1YPR025C CCA1P21269 546 aa2.2□□□□□ -2.06
CCL1YPR025C GRE3P38715 327 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CCL1YPR025C RTC3P38804 111 aaPredicted RBP2.2□□□□□ -2.06
CCL1YPR025C YGL159WP53110 370 aa2.2□□□□□ -2.06
CCL1YPR025C TLG1Q03322 224 aa2.2□□□□□ -2.06
CCL1YPR025C KRE28Q04431 385 aa2.2□□□□□ -2.06
CCL1YPR025C YLR030WQ07967 263 aa2.2□□□□□ -2.06
CCL1YPR025C EMC6Q12431 108 aa2.2□□□□□ -2.06
CCL1YPR025C YCR102CP25608 368 aa2.19□□□□□ -2.06
CCL1YPR025C ERG24P32462 438 aaKnown RBP2.19□□□□□ -2.06
CCL1YPR025C MIC12P38341 106 aa2.19□□□□□ -2.06
CCL1YPR025C ARC15P40518 154 aaRIP-Chip data2.19□□□□□ -2.06not detected
CCL1YPR025C RPC17P47076 161 aa2.19□□□□□ -2.06
CCL1YPR025C YJR079WP47126 109 aa2.19□□□□□ -2.06
CCL1YPR025C YNL046WP53956 172 aa2.19□□□□□ -2.06
CCL1YPR025C DCR2Q05924 578 aa2.19□□□□□ -2.06
CCL1YPR025C MHT1Q12525 324 aa2.19□□□□□ -2.06
CCL1YPR025C IPP1P00817 287 aaKnown RBP2.18□□□□□ -2.06
CCL1YPR025C Q0255P03881 472 aa2.18□□□□□ -2.06
CCL1YPR025C CDC33P07260 213 aaKnown RBP2.18□□□□□ -2.06
CCL1YPR025C NHP6BP11633 99 aaKnown RBP2.18□□□□□ -2.06
CCL1YPR025C PBN1P25580 416 aa2.18□□□□□ -2.06
CCL1YPR025C PPA2P28239 310 aa2.18□□□□□ -2.06
CCL1YPR025C YOR062CP36025 268 aa2.18□□□□□ -2.06
CCL1YPR025C NRG2P38082 220 aa2.18□□□□□ -2.06
CCL1YPR025C SIP3P38717 1229 aa2.18□□□□□ -2.06
CCL1YPR025C YHR125WP38831 101 aa2.18□□□□□ -2.06
CCL1YPR025C FAR8Q05040 523 aa2.18□□□□□ -2.06
CCL1YPR025C THP2O13539 261 aaKnown RBP2.17□□□□□ -2.06
CCL1YPR025C COQ1P18900 473 aa2.17□□□□□ -2.06
CCL1YPR025C MRPL25P23369 157 aa2.17□□□□□ -2.06
CCL1YPR025C RPL24BP24000 155 aaKnown RBP2.17□□□□□ -2.06
CCL1YPR025C VMA6P32366 345 aaKnown RBP2.17□□□□□ -2.06
CCL1YPR025C VPS21P36017 210 aaKnown RBP2.17□□□□□ -2.06
CCL1YPR025C RIB1P38066 345 aa2.17□□□□□ -2.06
CCL1YPR025C SSQ1Q05931 657 aaPredicted RBP2.17□□□□□ -2.06
CCL1YPR025C SEI1Q06058 285 aa2.17□□□□□ -2.06
CCL1YPR025C YPR172WQ06608 200 aa2.17□□□□□ -2.06
CCL1YPR025C YPL257WQ08974 193 aa2.17□□□□□ -2.06
CCL1YPR025C YLR126CQ12288 251 aa2.17□□□□□ -2.06
CCL1YPR025C YHR086W-AQ3E746 53 aa2.17□□□□□ -2.06
CCL1YPR025C YKL183C-AQ3E765 70 aa2.17□□□□□ -2.06
CCL1YPR025C SEY1Q99287 776 aa2.17□□□□□ -2.06
CCL1YPR025C JIP3O13555 125 aa2.16□□□□□ -2.06
CCL1YPR025C PUT1P09368 476 aa2.16□□□□□ -2.06
CCL1YPR025C PRP18P33411 251 aaPredicted RBP2.16□□□□□ -2.06
CCL1YPR025C CBT1P36038 271 aaPredicted RBP2.16□□□□□ -2.06
CCL1YPR025C YKL075CP36083 450 aa2.16□□□□□ -2.06
CCL1YPR025C URA8P38627 578 aaPredicted RBP2.16□□□□□ -2.06
CCL1YPR025C ERG28P40030 148 aa2.16□□□□□ -2.06
CCL1YPR025C YMR144WP40214 342 aaKnown RBP2.16□□□□□ -2.06
CCL1YPR025C SMD3P43321 101 aaKnown RBP2.16□□□□□ -2.06
CCL1YPR025C YJL027CP47063 138 aaPredicted RBP2.16□□□□□ -2.06
CCL1YPR025C CWC23P52868 283 aaPredicted RBP2.16□□□□□ -2.06
CCL1YPR025C GTR2P53290 341 aa2.16□□□□□ -2.06
CCL1YPR025C MRPS17Q03246 237 aaPredicted RBP2.16□□□□□ -2.06
CCL1YPR025C BNA7Q04066 261 aa2.16□□□□□ -2.06
CCL1YPR025C INM2Q05533 292 aa2.16□□□□□ -2.06
CCL1YPR025C MSA1Q08471 629 aa2.16□□□□□ -2.06
CCL1YPR025C SAC3P46674 1301 aa2.16□□□□□ -2.06
CCL1YPR025C DSF1P0CX08 502 aa2.15□□□□□ -2.07
CCL1YPR025C YNR073CP0CX09 502 aa2.15□□□□□ -2.07
CCL1YPR025C YMR31P19955 123 aa2.15□□□□□ -2.07
CCL1YPR025C VMA11P32842 164 aa2.15□□□□□ -2.07
CCL1YPR025C FCY21P40039 528 aa2.15□□□□□ -2.07
CCL1YPR025C YNL194CP40169 301 aa2.15□□□□□ -2.07
CCL1YPR025C CGR1P53188 120 aa2.15□□□□□ -2.07
CCL1YPR025C YGR026WP53217 278 aa2.15□□□□□ -2.07
CCL1YPR025C SIR4P11978 1358 aa2.14□□□□□ -2.07
CCL1YPR025C ADH3P07246 375 aaKnown RBP2.14□□□□□ -2.07
CCL1YPR025C ERD2P18414 219 aa2.14□□□□□ -2.07
CCL1YPR025C COX15P40086 486 aa2.14□□□□□ -2.07
CCL1YPR025C FIS1P40515 155 aa2.14□□□□□ -2.07
CCL1YPR025C YRB1P41920 201 aaKnown RBP2.14□□□□□ -2.07
CCL1YPR025C RMR1P53060 241 aa2.14□□□□□ -2.07
CCL1YPR025C PRM15Q03262 622 aa2.14□□□□□ -2.07
CCL1YPR025C YMR279CQ03263 540 aa2.14□□□□□ -2.07
CCL1YPR025C AKR2Q12013 749 aa2.14□□□□□ -2.07
CCL1YPR025C HTL1Q9URQ5 78 aa2.14□□□□□ -2.07
CCL1YPR025C COX5AP00424 153 aa2.13□□□□□ -2.07
CCL1YPR025C STE18P18852 110 aa2.13□□□□□ -2.07
CCL1YPR025C CDC10P25342 322 aaKnown RBP2.13□□□□□ -2.07
CCL1YPR025C MGM101P32787 269 aaKnown RBP2.13□□□□□ -2.07
CCL1YPR025C NTF2P33331 125 aaKnown RBP2.13□□□□□ -2.07
CCL1YPR025C TAF14P35189 244 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms