RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W CDC28P00546 298 aaKnown RBP1.74□□□□□ -2.13
RRP6YOR001W YOL163WP0CF20 169 aa1.74□□□□□ -2.13
RRP6YOR001W EPT1P22140 391 aa1.74□□□□□ -2.13
RRP6YOR001W DBF2P22204 572 aa1.74□□□□□ -2.13
RRP6YOR001W RRT13P40042 185 aa1.74□□□□□ -2.13
RRP6YOR001W YIL054WP40524 105 aa1.74□□□□□ -2.13
RRP6YOR001W UFE1P41834 346 aa1.74□□□□□ -2.13
RRP6YOR001W TMA22P47089 198 aaPredicted RBP1.74□□□□□ -2.13
RRP6YOR001W YGL159WP53110 370 aa1.74□□□□□ -2.13
RRP6YOR001W AGC1Q12482 902 aa1.74□□□□□ -2.13
RRP6YOR001W YBL112CQ3E7Y4 105 aa1.74□□□□□ -2.13
RRP6YOR001W ADH1P00330 348 aaKnown RBP1.73□□□□□ -2.13
RRP6YOR001W GCN3P14741 305 aa1.73□□□□□ -2.13
RRP6YOR001W GRX2P17695 143 aaKnown RBP1.73□□□□□ -2.13
RRP6YOR001W COX10P21592 462 aa1.73□□□□□ -2.13
RRP6YOR001W TRR1P29509 319 aaKnown RBP1.73□□□□□ -2.13
RRP6YOR001W SPS18P32572 300 aa1.73□□□□□ -2.13
RRP6YOR001W TCA17P32613 152 aa1.73□□□□□ -2.13
RRP6YOR001W APS1P35181 156 aa1.73□□□□□ -2.13
RRP6YOR001W MAK5P38112 773 aaPredicted RBP1.73□□□□□ -2.13
RRP6YOR001W YBL081WP38180 368 aaKnown RBP1.73□□□□□ -2.13
RRP6YOR001W ECM14P38836 430 aa1.73□□□□□ -2.13
RRP6YOR001W MEP2P41948 499 aa1.73□□□□□ -2.13
RRP6YOR001W YGL262WP53054 175 aa1.73□□□□□ -2.13
RRP6YOR001W YGL118CP53132 145 aa1.73□□□□□ -2.13
RRP6YOR001W SWT21P53873 357 aaPredicted RBP1.73□□□□□ -2.13
RRP6YOR001W YLR460CP54007 376 aa1.73□□□□□ -2.13
RRP6YOR001W YML108WQ03759 105 aa1.73□□□□□ -2.13
RRP6YOR001W YDR248CQ03786 193 aa1.73□□□□□ -2.13
RRP6YOR001W TVP15Q03860 143 aa1.73□□□□□ -2.13
RRP6YOR001W GGA1Q06336 557 aa1.73□□□□□ -2.13
RRP6YOR001W COX5AP00424 153 aa1.72□□□□□ -2.13
RRP6YOR001W CBP6P07253 162 aaPredicted RBP1.72□□□□□ -2.13
RRP6YOR001W BMH1P29311 267 aaKnown RBP1.72□□□□□ -2.13
RRP6YOR001W CAF4P36130 643 aa1.72□□□□□ -2.13
RRP6YOR001W ECM33P38248 429 aaKnown RBP1.72□□□□□ -2.13
RRP6YOR001W TEM1P38987 245 aa1.72□□□□□ -2.13
RRP6YOR001W YER121WP40076 114 aa1.72□□□□□ -2.13
RRP6YOR001W YER189WP40104 122 aa1.72□□□□□ -2.13
RRP6YOR001W YJR056CP47115 236 aa1.72□□□□□ -2.13
RRP6YOR001W PRM8P53174 237 aa1.72□□□□□ -2.13
RRP6YOR001W YGR067CP53243 804 aa1.72□□□□□ -2.13
RRP6YOR001W SSU72P53538 206 aaPredicted RBP1.72□□□□□ -2.13
RRP6YOR001W RTC4P53850 401 aa1.72□□□□□ -2.13
RRP6YOR001W NRK1P53915 240 aa1.72□□□□□ -2.13
RRP6YOR001W OSH6Q02201 448 aa1.72□□□□□ -2.13
RRP6YOR001W MRPS16Q02608 121 aa1.72□□□□□ -2.13
RRP6YOR001W YPL039WQ03080 316 aa1.72□□□□□ -2.13
RRP6YOR001W ARO80Q04052 950 aa1.72□□□□□ -2.13
RRP6YOR001W EMI1Q04406 187 aa1.72□□□□□ -2.13
RRP6YOR001W PIN3Q06449 215 aa1.72□□□□□ -2.13
RRP6YOR001W YPS3Q12303 508 aa1.72□□□□□ -2.13
RRP6YOR001W LSO2Q3E772 92 aaKnown RBP1.72□□□□□ -2.13
RRP6YOR001W YBL008W-AQ3E821 79 aa1.72□□□□□ -2.13
RRP6YOR001W OAC1P32332 324 aa1.72□□□□□ -2.13
RRP6YOR001W ECM34P38728 170 aa1.72□□□□□ -2.13
RRP6YOR001W ILM1P47155 203 aa1.72□□□□□ -2.13
RRP6YOR001W SDT1P53078 280 aa1.72□□□□□ -2.13
RRP6YOR001W SNO1Q03144 224 aa1.72□□□□□ -2.13
RRP6YOR001W PRM15Q03262 622 aa1.72□□□□□ -2.13
RRP6YOR001W NNT1Q05874 261 aa1.72□□□□□ -2.13
RRP6YOR001W YPL150WQ12152 901 aa1.72□□□□□ -2.13
RRP6YOR001W GCY1P14065 312 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
RRP6YOR001W YAK1P14680 807 aa1.71□□□□□ -2.14
RRP6YOR001W PRE7P23724 241 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W ACP1P32463 125 aa1.71□□□□□ -2.14
RRP6YOR001W RPA43P46669 326 aa1.71□□□□□ -2.14
RRP6YOR001W RPE1P46969 238 aa1.71□□□□□ -2.14
RRP6YOR001W YJL028WP47062 111 aa1.71□□□□□ -2.14
RRP6YOR001W YJL016WP47072 561 aa1.71□□□□□ -2.14
RRP6YOR001W ERV29P53337 310 aa1.71□□□□□ -2.14
RRP6YOR001W YNL247WP53852 767 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W LSM7P53905 115 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W PET191Q02772 108 aa1.71□□□□□ -2.14
RRP6YOR001W YDL211CQ12121 372 aa1.71□□□□□ -2.14
RRP6YOR001W YPL247CQ12523 523 aa1.71□□□□□ -2.14
RRP6YOR001W SWI1P09547 1314 aa1.71□□□□□ -2.14
RRP6YOR001W YLR462WO13556 202 aa1.71□□□□□ -2.14
RRP6YOR001W MRS1P07266 363 aa1.71□□□□□ -2.14
RRP6YOR001W ZWF1P11412 505 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W CKA2P19454 339 aa1.71□□□□□ -2.14
RRP6YOR001W CLG1P35190 452 aa1.71□□□□□ -2.14
RRP6YOR001W YPT52P36018 234 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W PRY2P36110 329 aa1.71□□□□□ -2.14
RRP6YOR001W TRM7P38238 310 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W AME1P38313 324 aa1.71□□□□□ -2.14
RRP6YOR001W SRP14P38985 146 aa1.71□□□□□ -2.14
RRP6YOR001W YEL075CP39972 122 aa1.71□□□□□ -2.14
RRP6YOR001W CAT5P41735 233 aa1.71□□□□□ -2.14
RRP6YOR001W ABF2Q02486 183 aa1.71□□□□□ -2.14
RRP6YOR001W YMR315WQ04869 349 aaKnown RBP1.71□□□□□ -2.14
RRP6YOR001W NOC4Q06512 552 aaPredicted RBP1.71□□□□□ -2.14
RRP6YOR001W TMC1Q08422 150 aaPredicted RBP1.71□□□□□ -2.14
RRP6YOR001W FLO11P08640 1367 aa1.71□□□□□ -2.14
RRP6YOR001W HSP26P15992 214 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
RRP6YOR001W SEC22P22214 214 aa1.7□□□□□ -2.14
RRP6YOR001W MGT1P26188 188 aa1.7□□□□□ -2.14
RRP6YOR001W SFC1P33303 322 aa1.7□□□□□ -2.14
RRP6YOR001W SSH1P38353 490 aaKnown RBP1.7□□□□□ -2.14
RRP6YOR001W DOG1P38774 246 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms