RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W DCR2Q05924 578 aa1.8□□□□□ -2.12
VPS38YLR360W YPR011CQ12251 326 aa1.8□□□□□ -2.12
VPS38YLR360W SME1Q12330 94 aaPredicted RBP1.8□□□□□ -2.12
VPS38YLR360W SAS5Q99314 248 aa1.8□□□□□ -2.12
VPS38YLR360W CAT8P39113 1433 aa1.79□□□□□ -2.12
VPS38YLR360W MET5P47169 1442 aa1.79□□□□□ -2.12
VPS38YLR360W HIS1P00498 297 aaKnown RBP1.79□□□□□ -2.12
VPS38YLR360W YCR102CP25608 368 aa1.79□□□□□ -2.12
VPS38YLR360W RRF1P38771 230 aa1.79□□□□□ -2.12
VPS38YLR360W YER034WP40022 185 aaKnown RBP1.79□□□□□ -2.12
VPS38YLR360W YJL118WP47022 219 aa1.79□□□□□ -2.12
VPS38YLR360W YJR012CP47087 207 aa1.79□□□□□ -2.12
VPS38YLR360W EMC2P47133 292 aaKnown RBP1.79□□□□□ -2.12
VPS38YLR360W MAL13P53338 473 aa1.79□□□□□ -2.12
VPS38YLR360W SNZ1Q03148 297 aa1.79□□□□□ -2.12
VPS38YLR360W SSQ1Q05931 657 aaPredicted RBP1.79□□□□□ -2.12
VPS38YLR360W YBL008W-AQ3E821 79 aa1.79□□□□□ -2.12
VPS38YLR360W RPA190P10964 1664 aaKnown RBP1.79□□□□□ -2.12
VPS38YLR360W DOP1Q03921 1698 aa1.79□□□□□ -2.12
VPS38YLR360W CDC25P04821 1589 aa1.78□□□□□ -2.12
VPS38YLR360W RKR1Q04781 1562 aa1.78□□□□□ -2.12
VPS38YLR360W TY4B-HP0C2J7 1802 aa1.78□□□□□ -2.12
VPS38YLR360W MER1P16523 270 aa1.78□□□□□ -2.12
VPS38YLR360W MRPL25P23369 157 aa1.78□□□□□ -2.12
VPS38YLR360W CDC10P25342 322 aaKnown RBP1.78□□□□□ -2.12
VPS38YLR360W YOR062CP36025 268 aa1.78□□□□□ -2.12
VPS38YLR360W ECM13P38195 257 aa1.78□□□□□ -2.12
VPS38YLR360W FCY21P40039 528 aa1.78□□□□□ -2.12
VPS38YLR360W DDI1P40087 428 aa1.78□□□□□ -2.12
VPS38YLR360W RIO2P40160 425 aaKnown RBP1.78□□□□□ -2.12
VPS38YLR360W RSM25P40496 264 aa1.78□□□□□ -2.12
VPS38YLR360W OST6Q03723 332 aa1.78□□□□□ -2.12
VPS38YLR360W YPL225WQ08971 146 aaKnown RBP1.78□□□□□ -2.12
VPS38YLR360W YPL119C-AQ3E751 87 aa1.78□□□□□ -2.12
VPS38YLR360W YBT1P32386 1661 aa1.78□□□□□ -2.12
VPS38YLR360W PDR15Q04182 1529 aaKnown RBP1.78□□□□□ -2.12
VPS38YLR360W PDR18P53756 1333 aa1.78□□□□□ -2.12
VPS38YLR360W UBR1P19812 1950 aa1.78□□□□□ -2.13
VPS38YLR360W URB1P34241 1764 aaKnown RBP1.78□□□□□ -2.13
VPS38YLR360W DRS2P39524 1355 aa1.78□□□□□ -2.13
VPS38YLR360W DSF1P0CX08 502 aa1.77□□□□□ -2.13
VPS38YLR360W YNR073CP0CX09 502 aa1.77□□□□□ -2.13
VPS38YLR360W RPB4P20433 221 aaPredicted RBP1.77□□□□□ -2.13
VPS38YLR360W SCM4P32564 187 aa1.77□□□□□ -2.13
VPS38YLR360W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
VPS38YLR360W SRL3P36167 246 aa1.77□□□□□ -2.13
VPS38YLR360W PET100P38958 111 aa1.77□□□□□ -2.13
VPS38YLR360W KAP114P53067 1004 aa1.77□□□□□ -2.13
VPS38YLR360W FUS2Q05670 677 aa1.77□□□□□ -2.13
VPS38YLR360W RIO1Q12196 484 aaKnown RBP1.77□□□□□ -2.13
VPS38YLR360W ADE6P38972 1358 aaKnown RBP1.77□□□□□ -2.13
VPS38YLR360W VPS15P22219 1454 aa1.76□□□□□ -2.13
VPS38YLR360W TY3B-GQ99315 1547 aa1.76□□□□□ -2.13
VPS38YLR360W TY4B-JP47024 1803 aa1.76□□□□□ -2.13
VPS38YLR360W POX1P13711 748 aa1.76□□□□□ -2.13
VPS38YLR360W SSH1P38353 490 aaKnown RBP1.76□□□□□ -2.13
VPS38YLR360W RCY1P39531 840 aa1.76□□□□□ -2.13
VPS38YLR360W SNX4P47057 423 aa1.76□□□□□ -2.13
VPS38YLR360W EBS1Q03466 884 aaKnown RBP1.76□□□□□ -2.13
VPS38YLR360W PLP1Q04004 230 aa1.76□□□□□ -2.13
VPS38YLR360W YLR179CQ06252 201 aaKnown RBP1.76□□□□□ -2.13
VPS38YLR360W RRP36Q12481 300 aaPredicted RBP1.76□□□□□ -2.13
VPS38YLR360W MHT1Q12525 324 aa1.76□□□□□ -2.13
VPS38YLR360W YKL068W-AQ3E826 78 aa1.76□□□□□ -2.13
VPS38YLR360W DNF1P32660 1571 aa1.76□□□□□ -2.13
VPS38YLR360W YLR422WQ06409 1932 aa1.76□□□□□ -2.13
VPS38YLR360W DNF3Q12674 1656 aa1.76□□□□□ -2.13
VPS38YLR360W PDR12Q02785 1511 aa1.75□□□□□ -2.13
VPS38YLR360W SEN2P16658 377 aa1.75□□□□□ -2.13
VPS38YLR360W MRPS28P21771 286 aa1.75□□□□□ -2.13
VPS38YLR360W QRI5P32344 111 aa1.75□□□□□ -2.13
VPS38YLR360W DOA4P32571 926 aa1.75□□□□□ -2.13
VPS38YLR360W RCN1P36054 211 aa1.75□□□□□ -2.13
VPS38YLR360W ECM4P36156 370 aa1.75□□□□□ -2.13
VPS38YLR360W MRPL37P36532 105 aa1.75□□□□□ -2.13
VPS38YLR360W RPL10P41805 221 aaKnown RBP1.75□□□□□ -2.13
VPS38YLR360W OST2P46964 130 aa1.75□□□□□ -2.13
VPS38YLR360W HOP2P53187 214 aa1.75□□□□□ -2.13
VPS38YLR360W RSM10Q03201 203 aa1.75□□□□□ -2.13
VPS38YLR360W DML1Q03652 475 aa1.75□□□□□ -2.13
VPS38YLR360W YML108WQ03759 105 aa1.75□□□□□ -2.13
VPS38YLR360W RNH1Q04740 348 aa1.75□□□□□ -2.13
VPS38YLR360W BRX1Q08235 291 aaKnown RBP1.75□□□□□ -2.13
VPS38YLR360W ABP140Q08641 628 aaKnown RBP1.75□□□□□ -2.13
VPS38YLR360W GEA2P39993 1459 aaKnown RBP1.75□□□□□ -2.13
VPS38YLR360W SEC7P11075 2009 aaKnown RBP1.74□□□□□ -2.13
VPS38YLR360W RPL24AP04449 155 aaKnown RBP1.74□□□□□ -2.13
VPS38YLR360W SGA1P08019 549 aa1.74□□□□□ -2.13
VPS38YLR360W PUT1P09368 476 aa1.74□□□□□ -2.13
VPS38YLR360W MRP1P10662 321 aaKnown RBP1.74□□□□□ -2.13
VPS38YLR360W BMH2P34730 273 aaKnown RBP1.74□□□□□ -2.13
VPS38YLR360W MAK5P38112 773 aaPredicted RBP1.74□□□□□ -2.13
VPS38YLR360W SIP3P38717 1229 aa1.74□□□□□ -2.13
VPS38YLR360W YHB1P39676 399 aaKnown RBP1.74□□□□□ -2.13
VPS38YLR360W RTT105P40063 208 aa1.74□□□□□ -2.13
VPS38YLR360W SNZ3P43545 298 aa1.74□□□□□ -2.13
VPS38YLR360W YFR054CP43622 192 aa1.74□□□□□ -2.13
VPS38YLR360W SNZ2P53824 298 aa1.74□□□□□ -2.13
VPS38YLR360W BBP1Q12365 385 aa1.74□□□□□ -2.13
VPS38YLR360W ADH3P07246 375 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 155.5 ms