RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C TAD2P47058 250 aa2.89□□□□□ -1.95
USB1YLR132C RPN14P53196 417 aa2.89□□□□□ -1.95
USB1YLR132C SNZ2P53824 298 aa2.89□□□□□ -1.95
USB1YLR132C MRS2Q01926 470 aa2.89□□□□□ -1.95
USB1YLR132C PLB3Q08108 686 aa2.89□□□□□ -1.95
USB1YLR132C YPL264CQ08980 353 aa2.89□□□□□ -1.95
USB1YLR132C YOR114WQ12219 294 aa2.89□□□□□ -1.95
USB1YLR132C PHO80P20052 293 aa2.88□□□□□ -1.95
USB1YLR132C CAM1P29547 415 aaKnown RBP2.88□□□□□ -1.95
USB1YLR132C ARO4P32449 370 aaKnown RBP2.88□□□□□ -1.95
USB1YLR132C KRE6P32486 720 aa2.88□□□□□ -1.95
USB1YLR132C PHO89P38361 574 aa2.88□□□□□ -1.95
USB1YLR132C ECO1P43605 281 aa2.88□□□□□ -1.95
USB1YLR132C KAP114P53067 1004 aa2.88□□□□□ -1.95
USB1YLR132C TPN1P53099 579 aa2.88□□□□□ -1.95
USB1YLR132C TIM21P53220 239 aa2.88□□□□□ -1.95
USB1YLR132C VPS60Q03390 229 aa2.88□□□□□ -1.95
USB1YLR132C SFH1Q06168 426 aa2.88□□□□□ -1.95
USB1YLR132C MRP1P10662 321 aaKnown RBP2.87□□□□□ -1.95
USB1YLR132C YAK1P14680 807 aa2.87□□□□□ -1.95
USB1YLR132C CAT2P32796 670 aaKnown RBP2.87□□□□□ -1.95
USB1YLR132C PRY2P36110 329 aa2.87□□□□□ -1.95
USB1YLR132C MED8P38304 223 aa2.87□□□□□ -1.95
USB1YLR132C YHL044WP38727 235 aa2.87□□□□□ -1.95
USB1YLR132C YEL028WP39989 153 aa2.87□□□□□ -1.95
USB1YLR132C SYS1P41544 203 aa2.87□□□□□ -1.95
USB1YLR132C RPE1P46969 238 aa2.87□□□□□ -1.95
USB1YLR132C UFD1P53044 361 aa2.87□□□□□ -1.95
USB1YLR132C ATC1Q04005 294 aa2.87□□□□□ -1.95
USB1YLR132C VBA1Q04301 562 aa2.87□□□□□ -1.95
USB1YLR132C SEC10Q06245 871 aa2.87□□□□□ -1.95
USB1YLR132C SWC7Q06707 132 aa2.87□□□□□ -1.95
USB1YLR132C YLL007CQ07799 665 aa2.87□□□□□ -1.95
USB1YLR132C YLR030WQ07967 263 aa2.87□□□□□ -1.95
USB1YLR132C OCA6Q12454 224 aa2.87□□□□□ -1.95
USB1YLR132C YAL064W-BO13512 126 aa2.86□□□□□ -1.95
USB1YLR132C TDH1P00360 332 aaKnown RBP2.86□□□□□ -1.95
USB1YLR132C PET494P07390 489 aaPredicted RBP2.86□□□□□ -1.95
USB1YLR132C PEX3P28795 441 aa2.86□□□□□ -1.95
USB1YLR132C YKT6P36015 200 aaKnown RBP2.86□□□□□ -1.95
USB1YLR132C HSM3P38348 480 aa2.86□□□□□ -1.95
USB1YLR132C YHI9P38765 294 aa2.86□□□□□ -1.95
USB1YLR132C ECM14P38836 430 aa2.86□□□□□ -1.95
USB1YLR132C AVT7P40501 490 aa2.86□□□□□ -1.95
USB1YLR132C YFR045WP43617 309 aa2.86□□□□□ -1.95
USB1YLR132C SWT21P53873 357 aaPredicted RBP2.86□□□□□ -1.95
USB1YLR132C RHO3Q00245 231 aaKnown RBP2.86□□□□□ -1.95
USB1YLR132C EMI1Q04406 187 aa2.86□□□□□ -1.95
USB1YLR132C CTR3Q06686 241 aa2.86□□□□□ -1.95
USB1YLR132C YAL063C-AQ3E791 96 aa2.86□□□□□ -1.95
USB1YLR132C CYR1P08678 2026 aaKnown RBP2.86□□□□□ -1.95
USB1YLR132C BCY1P07278 416 aaKnown RBP2.85□□□□□ -1.95
USB1YLR132C YOL163WP0CF20 169 aa2.85□□□□□ -1.95
USB1YLR132C CYC2P38909 366 aa2.85□□□□□ -1.95
USB1YLR132C IBA57P47158 497 aa2.85□□□□□ -1.95
USB1YLR132C EBS1Q03466 884 aaKnown RBP2.85□□□□□ -1.95
USB1YLR132C YDR114CQ04597 100 aa2.85□□□□□ -1.95
USB1YLR132C YOR097CQ12274 175 aaPredicted RBP2.85□□□□□ -1.95
USB1YLR132C YPR096CO13587 100 aa2.84□□□□□ -1.95
USB1YLR132C COX5AP00424 153 aa2.84□□□□□ -1.95
USB1YLR132C YCR025CP25352 136 aa2.84□□□□□ -1.95
USB1YLR132C ALK2P32789 676 aaPredicted RBP2.84□□□□□ -1.95
USB1YLR132C POP8P38208 133 aa2.84□□□□□ -1.95
USB1YLR132C TIM13P53299 105 aa2.84□□□□□ -1.95
USB1YLR132C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
USB1YLR132C YDR222WQ04925 415 aa2.84□□□□□ -1.95
USB1YLR132C BTS1Q12051 335 aa2.84□□□□□ -1.95
USB1YLR132C MRX4Q12467 430 aa2.84□□□□□ -1.95
USB1YLR132C RRP36Q12481 300 aaPredicted RBP2.84□□□□□ -1.95
USB1YLR132C EFG1Q3E705 233 aaKnown RBP2.84□□□□□ -1.95
USB1YLR132C YOS9Q99220 542 aa2.84□□□□□ -1.95
USB1YLR132C YEL009C-AA0A023PZF2 135 aa2.83□□□□□ -1.96
USB1YLR132C PRE7P23724 241 aaKnown RBP2.83□□□□□ -1.96
USB1YLR132C ATG15P25641 520 aa2.83□□□□□ -1.96
USB1YLR132C ERG2P32352 222 aa2.83□□□□□ -1.96
USB1YLR132C YUH1P35127 236 aa2.83□□□□□ -1.96
USB1YLR132C MRPL15P36523 253 aa2.83□□□□□ -1.96
USB1YLR132C AIM18P38884 321 aa2.83□□□□□ -1.96
USB1YLR132C YEL073CP39974 107 aa2.83□□□□□ -1.96
USB1YLR132C DDI1P40087 428 aa2.83□□□□□ -1.96
USB1YLR132C YIL086CP40503 102 aa2.83□□□□□ -1.96
USB1YLR132C TVP15Q03860 143 aa2.83□□□□□ -1.96
USB1YLR132C LDB18Q07887 179 aa2.83□□□□□ -1.96
USB1YLR132C YPS3Q12303 508 aa2.83□□□□□ -1.96
USB1YLR132C SEY1Q99287 776 aa2.83□□□□□ -1.96
USB1YLR132C DDP1Q99321 188 aaKnown RBP2.83□□□□□ -1.96
USB1YLR132C SEC16P48415 2195 aaKnown RBP2.83□□□□□ -1.96
USB1YLR132C MDM35O60200 86 aa2.82□□□□□ -1.96
USB1YLR132C CPA1P07258 411 aaKnown RBP2.82□□□□□ -1.96
USB1YLR132C POF1P25576 258 aa2.82□□□□□ -1.96
USB1YLR132C AGA2P32781 87 aa2.82□□□□□ -1.96
USB1YLR132C TRM7P38238 310 aaKnown RBP2.82□□□□□ -1.96
USB1YLR132C NPT1P39683 429 aaKnown RBP2.82□□□□□ -1.96
USB1YLR132C COA1P40452 197 aa2.82□□□□□ -1.96
USB1YLR132C PHB1P40961 287 aa2.82□□□□□ -1.96
USB1YLR132C RPC17P47076 161 aa2.82□□□□□ -1.96
USB1YLR132C YJR012CP47087 207 aa2.82□□□□□ -1.96
USB1YLR132C TRM9P49957 279 aa2.82□□□□□ -1.96
USB1YLR132C YNL247WP53852 767 aaKnown RBP2.82□□□□□ -1.96
USB1YLR132C OSH6Q02201 448 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 210.2 ms