RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W RDL1Q12305 139 aaKnown RBP3.24□□□□□ -1.89
NUP85YJR042W EFG1Q3E705 233 aaKnown RBP3.24□□□□□ -1.89
NUP85YJR042W PET54P10834 293 aa3.23□□□□□ -1.89
NUP85YJR042W DBF2P22204 572 aa3.23□□□□□ -1.89
NUP85YJR042W ATG15P25641 520 aa3.23□□□□□ -1.89
NUP85YJR042W KAR9P32526 644 aa3.23□□□□□ -1.89
NUP85YJR042W PHD1P36093 366 aa3.23□□□□□ -1.89
NUP85YJR042W SRL3P36167 246 aa3.23□□□□□ -1.89
NUP85YJR042W MRPL28P36527 147 aa3.23□□□□□ -1.89
NUP85YJR042W SHE3P38272 425 aaKnown RBP3.23□□□□□ -1.89
NUP85YJR042W CUE1P38428 203 aa3.23□□□□□ -1.89
NUP85YJR042W PRE6P40303 254 aaKnown RBP3.23□□□□□ -1.89
NUP85YJR042W HPM1P40481 377 aa3.23□□□□□ -1.89
NUP85YJR042W GUF1P46943 645 aa3.23□□□□□ -1.89
NUP85YJR042W PDR17P53844 350 aa3.23□□□□□ -1.89
NUP85YJR042W YNL010WP53981 241 aaKnown RBP3.23□□□□□ -1.89
NUP85YJR042W IRC15Q02733 499 aa3.23□□□□□ -1.89
NUP85YJR042W ODC1Q03028 310 aa3.23□□□□□ -1.89
NUP85YJR042W YMR279CQ03263 540 aa3.23□□□□□ -1.89
NUP85YJR042W FAR10Q06001 478 aa3.23□□□□□ -1.89
NUP85YJR042W SLD7Q08457 257 aa3.23□□□□□ -1.89
NUP85YJR042W YOR342CQ12182 319 aa3.23□□□□□ -1.89
NUP85YJR042W RFM1Q12192 310 aa3.23□□□□□ -1.89
NUP85YJR042W COS2P0CX12 379 aa3.23□□□□□ -1.89
NUP85YJR042W COS3P0CX13 379 aa3.23□□□□□ -1.89
NUP85YJR042W SNF4P12904 322 aa3.23□□□□□ -1.89
NUP85YJR042W NMT1P14743 455 aa3.23□□□□□ -1.89
NUP85YJR042W MCK1P21965 375 aaKnown RBP3.23□□□□□ -1.89
NUP85YJR042W UPS2P35200 230 aa3.23□□□□□ -1.89
NUP85YJR042W SLM6P38343 150 aa3.23□□□□□ -1.89
NUP85YJR042W RCK1P38622 512 aa3.23□□□□□ -1.89
NUP85YJR042W YIL067CP40514 678 aa3.23□□□□□ -1.89
NUP85YJR042W YJL016WP47072 561 aa3.23□□□□□ -1.89
NUP85YJR042W YGL204CP53089 101 aa3.23□□□□□ -1.89
NUP85YJR042W TPC1P53257 314 aa3.23□□□□□ -1.89
NUP85YJR042W COG5P53951 403 aa3.23□□□□□ -1.89
NUP85YJR042W YKR005CQ02203 525 aa3.23□□□□□ -1.89
NUP85YJR042W HPT1Q04178 221 aaKnown RBP3.23□□□□□ -1.89
NUP85YJR042W SWF1Q04629 336 aa3.23□□□□□ -1.89
NUP85YJR042W SEI1Q06058 285 aa3.23□□□□□ -1.89
NUP85YJR042W PEX30Q06169 523 aa3.23□□□□□ -1.89
NUP85YJR042W TPO3Q06451 622 aa3.23□□□□□ -1.89
NUP85YJR042W MIM1Q08176 113 aa3.23□□□□□ -1.89
NUP85YJR042W MCT1Q12283 360 aa3.23□□□□□ -1.89
NUP85YJR042W RDI1Q12434 202 aa3.23□□□□□ -1.89
NUP85YJR042W MRX4Q12467 430 aa3.23□□□□□ -1.89
NUP85YJR042W YPL119C-AQ3E751 87 aa3.23□□□□□ -1.89
NUP85YJR042W RPS14AP06367 137 aaKnown RBP3.22□□□□□ -1.89
NUP85YJR042W ZWF1P11412 505 aaKnown RBP3.22□□□□□ -1.89
NUP85YJR042W CTA1P15202 515 aa3.22□□□□□ -1.89
NUP85YJR042W HSP26P15992 214 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
NUP85YJR042W YCR090CP25654 182 aaKnown RBP3.22□□□□□ -1.89
NUP85YJR042W MDM31P38880 579 aa3.22□□□□□ -1.89
NUP85YJR042W NVJ1P38881 321 aa3.22□□□□□ -1.89
NUP85YJR042W RPS14BP39516 138 aaKnown RBP3.22□□□□□ -1.89
NUP85YJR042W MST28P39552 234 aa3.22□□□□□ -1.89
NUP85YJR042W GWT1P47026 490 aa3.22□□□□□ -1.89
NUP85YJR042W AVT4P50944 713 aa3.22□□□□□ -1.89
NUP85YJR042W AIF1P52923 378 aa3.22□□□□□ -1.89
NUP85YJR042W BRR6P53062 197 aa3.22□□□□□ -1.89
NUP85YJR042W HSK3P69852 69 aa3.22□□□□□ -1.89
NUP85YJR042W BCH1Q05029 724 aa3.22□□□□□ -1.89
NUP85YJR042W YOL073CQ08232 322 aa3.22□□□□□ -1.89
NUP85YJR042W MDM10P18409 493 aa3.21□□□□□ -1.89
NUP85YJR042W AAT2P23542 418 aaKnown RBP3.21□□□□□ -1.89
NUP85YJR042W CTS1P29029 562 aa3.21□□□□□ -1.89
NUP85YJR042W MTC4P38335 694 aaKnown RBP3.21□□□□□ -1.89
NUP85YJR042W YEL028WP39989 153 aa3.21□□□□□ -1.89
NUP85YJR042W KRE29P40026 464 aa3.21□□□□□ -1.89
NUP85YJR042W MCM22P47167 239 aa3.21□□□□□ -1.89
NUP85YJR042W RBL2P48606 106 aaKnown RBP3.21□□□□□ -1.89
NUP85YJR042W UBC12P52491 188 aa3.21□□□□□ -1.89
NUP85YJR042W SCS3P53012 380 aa3.21□□□□□ -1.89
NUP85YJR042W SWC4P53201 476 aa3.21□□□□□ -1.89
NUP85YJR042W IBD2P53892 351 aa3.21□□□□□ -1.89
NUP85YJR042W LSM3P57743 89 aaKnown RBP3.21□□□□□ -1.89
NUP85YJR042W CSN9Q03981 162 aa3.21□□□□□ -1.89
NUP85YJR042W YLR446WQ06204 433 aa3.21□□□□□ -1.89
NUP85YJR042W TIM18Q08749 192 aa3.21□□□□□ -1.89
NUP85YJR042W YPR064WQ12492 139 aa3.21□□□□□ -1.89
NUP85YJR042W MRS1P07266 363 aa3.21□□□□□ -1.9
NUP85YJR042W PTC1P35182 281 aa3.21□□□□□ -1.9
NUP85YJR042W ASK1P35734 292 aa3.21□□□□□ -1.9
NUP85YJR042W GPX1P36014 167 aa3.21□□□□□ -1.9
NUP85YJR042W CAF4P36130 643 aa3.21□□□□□ -1.9
NUP85YJR042W SKG1P36169 355 aa3.21□□□□□ -1.9
NUP85YJR042W MRP21P38175 177 aa3.21□□□□□ -1.9
NUP85YJR042W AVT5P38176 459 aa3.21□□□□□ -1.9
NUP85YJR042W YBR285WP38354 144 aa3.21□□□□□ -1.9
NUP85YJR042W YIL169CP40442 995 aa3.21□□□□□ -1.9
NUP85YJR042W STB1P42845 420 aa3.21□□□□□ -1.9
NUP85YJR042W GTR2P53290 341 aa3.21□□□□□ -1.9
NUP85YJR042W ATP23P53722 227 aa3.21□□□□□ -1.9
NUP85YJR042W YNL033WP53964 284 aa3.21□□□□□ -1.9
NUP85YJR042W YNL019CP53975 284 aa3.21□□□□□ -1.9
NUP85YJR042W DPP1Q05521 289 aa3.21□□□□□ -1.9
NUP85YJR042W YPR098CQ06089 161 aa3.21□□□□□ -1.9
NUP85YJR042W MSA1Q08471 629 aa3.21□□□□□ -1.9
NUP85YJR042W YLR112WQ12130 139 aa3.21□□□□□ -1.9
NUP85YJR042W YCR024C-BQ3E7Z8 88 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 63 ms