RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W ALG9P53868 555 aaKnown RBP11.98□□□□□ -0.49
RPN10YHR200W SMX3P54999 86 aaPredicted RBP11.98□□□□□ -0.49
RPN10YHR200W YDC1Q02896 317 aa11.98□□□□□ -0.49
RPN10YHR200W RPL25P04456 142 aaKnown RBP11.97□□□□□ -0.49
RPN10YHR200W GRX2P17695 143 aaKnown RBP11.97□□□□□ -0.49
RPN10YHR200W HNM1P19807 563 aa11.97□□□□□ -0.49
RPN10YHR200W SAG1P20840 650 aa11.97□□□□□ -0.49
RPN10YHR200W PAN3P36102 679 aaPredicted RBP11.97□□□□□ -0.49
RPN10YHR200W FAT1P38225 669 aa11.97□□□□□ -0.49
RPN10YHR200W SWM2P40342 146 aa11.97□□□□□ -0.49
RPN10YHR200W PIN3Q06449 215 aa11.97□□□□□ -0.49
RPN10YHR200W HUT1Q12520 339 aa11.97□□□□□ -0.49
RPN10YHR200W PRP8P33334 2413 aaKnown RBP11.97□□□□□ -0.49
RPN10YHR200W AAC1P04710 309 aa11.96□□□□□ -0.49
RPN10YHR200W ARG80P07249 177 aa11.96□□□□□ -0.49
RPN10YHR200W PEX4P29340 183 aa11.96□□□□□ -0.49
RPN10YHR200W FMT1P32785 401 aa11.96□□□□□ -0.49
RPN10YHR200W VAM7P32912 316 aa11.96□□□□□ -0.49
RPN10YHR200W RRF1P38771 230 aa11.96□□□□□ -0.49
RPN10YHR200W UBC13P52490 153 aa11.96□□□□□ -0.49
RPN10YHR200W UFD1P53044 361 aa11.96□□□□□ -0.49
RPN10YHR200W DLT1Q04216 342 aa11.96□□□□□ -0.49
RPN10YHR200W YOR186WQ08560 144 aa11.96□□□□□ -0.49
RPN10YHR200W MSI1P13712 422 aa11.95□□□□□ -0.5
RPN10YHR200W RFA1P22336 621 aaKnown RBP11.95□□□□□ -0.5
RPN10YHR200W GLC7P32598 312 aaKnown RBP11.95□□□□□ -0.5
RPN10YHR200W LAG1P38703 411 aa11.95□□□□□ -0.5
RPN10YHR200W YHL037CP38733 133 aa11.95□□□□□ -0.5
RPN10YHR200W OST1P41543 476 aaKnown RBP11.95□□□□□ -0.5
RPN10YHR200W MID1P41821 548 aa11.95□□□□□ -0.5
RPN10YHR200W YDR248CQ03786 193 aa11.95□□□□□ -0.5
RPN10YHR200W YMR144WP40214 342 aaKnown RBP11.94□□□□□ -0.5
RPN10YHR200W EGT2P42835 1041 aa11.94□□□□□ -0.5
RPN10YHR200W YJR011CP47086 261 aaPredicted RBP11.94□□□□□ -0.5
RPN10YHR200W YPL067CQ02754 198 aa11.94□□□□□ -0.5
RPN10YHR200W NGL2Q03264 515 aaKnown RBP11.94□□□□□ -0.5
RPN10YHR200W YMR254CQ04838 102 aa11.94□□□□□ -0.5
RPN10YHR200W MED4Q12343 284 aa11.94□□□□□ -0.5
RPN10YHR200W RPS23AP0CX29 145 aaKnown RBP11.93□□□□□ -0.5
RPN10YHR200W RPS23BP0CX30 145 aa11.93□□□□□ -0.5
RPN10YHR200W SUA5P32579 426 aa11.93□□□□□ -0.5
RPN10YHR200W YBR220CP38318 560 aa11.93□□□□□ -0.5
RPN10YHR200W PRS2P38620 318 aaKnown RBP11.93□□□□□ -0.5
RPN10YHR200W PRS3P38689 320 aaKnown RBP11.93□□□□□ -0.5
RPN10YHR200W BFR1P38934 470 aaKnown RBP RIP-Chip data11.93□□□□□ -0.5not detected
RPN10YHR200W YER079WP40052 210 aaKnown RBP11.93□□□□□ -0.5
RPN10YHR200W MRX5P47007 382 aa11.93□□□□□ -0.5
RPN10YHR200W TYW3P53177 273 aa11.93□□□□□ -0.5
RPN10YHR200W YPL077CQ02831 240 aa11.93□□□□□ -0.5
RPN10YHR200W CAB5Q03941 241 aa11.93□□□□□ -0.5
RPN10YHR200W SCP1Q08873 200 aa11.93□□□□□ -0.5
RPN10YHR200W TFB5Q3E7C1 72 aaPredicted RBP11.93□□□□□ -0.5
RPN10YHR200W PET122P10355 254 aa11.92□□□□□ -0.5
RPN10YHR200W STF2P16965 84 aa11.92□□□□□ -0.5
RPN10YHR200W YCR016WP25617 290 aaKnown RBP11.92□□□□□ -0.5
RPN10YHR200W BMT5P40493 336 aa11.92□□□□□ -0.5
RPN10YHR200W GRC3Q07845 632 aa11.92□□□□□ -0.5
RPN10YHR200W RNH203Q12338 110 aa11.92□□□□□ -0.5
RPN10YHR200W EAF3Q12432 401 aa11.92□□□□□ -0.5
RPN10YHR200W UBA3Q99344 299 aa11.92□□□□□ -0.5
RPN10YHR200W SEC16P48415 2195 aaKnown RBP11.91□□□□□ -0.5
RPN10YHR200W RPI1P23250 407 aaKnown RBP11.91□□□□□ -0.5
RPN10YHR200W VMA8P32610 256 aaKnown RBP11.91□□□□□ -0.5
RPN10YHR200W CCS1P40202 249 aaKnown RBP11.91□□□□□ -0.5
RPN10YHR200W GWT1P47026 490 aa11.91□□□□□ -0.5
RPN10YHR200W PRM15Q03262 622 aa11.91□□□□□ -0.5
RPN10YHR200W UPS1Q05776 175 aa11.91□□□□□ -0.5
RPN10YHR200W SYM1Q06563 197 aa11.91□□□□□ -0.5
RPN10YHR200W GAL1P04385 528 aa11.9□□□□□ -0.5
RPN10YHR200W TRR1P29509 319 aaKnown RBP11.9□□□□□ -0.5
RPN10YHR200W YBR197CP38306 217 aa11.9□□□□□ -0.5
RPN10YHR200W VMA22P38784 181 aa11.9□□□□□ -0.5
RPN10YHR200W LNP1P38878 278 aa11.9□□□□□ -0.5
RPN10YHR200W ECM27P47144 725 aa11.9□□□□□ -0.5
RPN10YHR200W YDR286CQ05530 114 aa11.9□□□□□ -0.5
RPN10YHR200W MRL1Q06815 381 aa11.9□□□□□ -0.5
RPN10YHR200W NCE102Q12207 173 aaRIP-Chip data11.9□□□□□ -0.5not detected
RPN10YHR200W VAM3Q12241 283 aa11.9□□□□□ -0.5
RPN10YHR200W REP2P03872 296 aa11.89□□□□□ -0.51
RPN10YHR200W PUT1P09368 476 aa11.89□□□□□ -0.51
RPN10YHR200W ACB1P31787 87 aa11.89□□□□□ -0.51
RPN10YHR200W POP8P38208 133 aa11.89□□□□□ -0.51
RPN10YHR200W TAF4P50105 388 aa11.89□□□□□ -0.51
RPN10YHR200W PLP1Q04004 230 aa11.89□□□□□ -0.51
RPN10YHR200W API2Q04413 109 aa11.89□□□□□ -0.51
RPN10YHR200W WHI5Q12416 295 aa11.89□□□□□ -0.51
RPN10YHR200W ATG40Q99325 256 aa11.89□□□□□ -0.51
RPN10YHR200W YML003WP0CF16 290 aa11.88□□□□□ -0.51
RPN10YHR200W COS8P38723 381 aa11.88□□□□□ -0.51
RPN10YHR200W YER137CP40083 148 aaKnown RBP11.88□□□□□ -0.51
RPN10YHR200W TOK1P40310 691 aa11.88□□□□□ -0.51
RPN10YHR200W YFL051CP43552 160 aa11.88□□□□□ -0.51
RPN10YHR200W HNT2P49775 206 aa11.88□□□□□ -0.51
RPN10YHR200W CRZ1P53968 678 aa11.88□□□□□ -0.51
RPN10YHR200W YNG1Q08465 219 aa11.88□□□□□ -0.51
RPN10YHR200W CKA1P15790 372 aa11.87□□□□□ -0.51
RPN10YHR200W OCH1P31755 480 aa11.87□□□□□ -0.51
RPN10YHR200W AIM46P38885 310 aa11.87□□□□□ -0.51
RPN10YHR200W SOL1P50278 321 aa11.87□□□□□ -0.51
RPN10YHR200W YPC1P38298 316 aa11.86□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms