RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	VBA1	Q04301	562 aa		4.7	□□□□□ -1.66
SHE10	YGL228W	SPR28	Q04921	423 aa		4.7	□□□□□ -1.66
SHE10	YGL228W	MRL1	Q06815	381 aa		4.7	□□□□□ -1.66
SHE10	YGL228W	RFU1	Q08003	200 aa		4.7	□□□□□ -1.66
SHE10	YGL228W	RRS1	Q08746	203 aa	Known RBP	4.7	□□□□□ -1.66
SHE10	YGL228W	BPH1	P25356	2167 aa		4.7	□□□□□ -1.66
SHE10	YGL228W	SAR1	P20606	190 aa	Known RBP	4.69	□□□□□ -1.66
SHE10	YGL228W	MSS1	P32559	526 aa	Predicted RBP	4.69	□□□□□ -1.66
SHE10	YGL228W	ARC40	P38328	384 aa	Known RBP	4.69	□□□□□ -1.66
SHE10	YGL228W	YER079W	P40052	210 aa	Known RBP	4.69	□□□□□ -1.66
SHE10	YGL228W	YIL029C	P40538	142 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	UBC13	P52490	153 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	DLT1	Q04216	342 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	YOR385W	Q08909	290 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	YLR125W	Q12138	136 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	FSH3	Q99369	266 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	AAC1	P04710	309 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	UTP30	P36144	274 aa	Known RBP	4.69	□□□□□ -1.66
SHE10	YGL228W	GWT1	P47026	490 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	SSN8	P47821	323 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	GPG1	P53130	126 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	ACS1	Q01574	713 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	NRG1	Q03125	231 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	GAT3	Q07928	141 aa		4.69	□□□□□ -1.66
SHE10	YGL228W	MPD1	Q12404	318 aa	Known RBP	4.69	□□□□□ -1.66
SHE10	YGL228W	NUM1	Q00402	2748 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	RPS31	P05759	152 aa	Known RBP	4.68	□□□□□ -1.66
SHE10	YGL228W	MET3	P08536	511 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	RFA3	P26755	122 aa	Known RBP	4.68	□□□□□ -1.66
SHE10	YGL228W	PEX4	P29340	183 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	PAN3	P36102	679 aa	Predicted RBP	4.68	□□□□□ -1.66
SHE10	YGL228W	YBR220C	P38318	560 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	ARO9	P38840	513 aa	Predicted RBP	4.68	□□□□□ -1.66
SHE10	YGL228W	YML018C	Q03730	393 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	YPR098C	Q06089	161 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	YTH1	Q06102	208 aa	Predicted RBP	4.68	□□□□□ -1.66
SHE10	YGL228W	SYM1	Q06563	197 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	YOR186W	Q08560	144 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	EAF3	Q12432	401 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	PET20	Q99373	253 aa		4.68	□□□□□ -1.66
SHE10	YGL228W	SSA3	P09435	649 aa	Known RBP	4.67	□□□□□ -1.66
SHE10	YGL228W	SPS100	P13130	326 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	CDC34	P14682	295 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	ERG3	P32353	365 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	FLO10	P36170	1169 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	YGP1	P38616	354 aa	Known RBP	4.67	□□□□□ -1.66
SHE10	YGL228W	EGT2	P42835	1041 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	GNA1	P43577	159 aa	Predicted RBP	4.67	□□□□□ -1.66
SHE10	YGL228W	SKP1	P52286	194 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	CRZ1	P53968	678 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	SKO1	Q02100	647 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	YDC1	Q02896	317 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	YMR279C	Q03263	540 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	YDR248C	Q03786	193 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	YDR114C	Q04597	100 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	FEX2	Q08991	375 aa		4.67	□□□□□ -1.66
SHE10	YGL228W	RPL25	P04456	142 aa	Known RBP	4.66	□□□□□ -1.66
SHE10	YGL228W	PET122	P10355	254 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	DIT1	P21623	536 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	IMP1	P28627	190 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	MRP17	P28778	131 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	POP8	P38208	133 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	VMA22	P38784	181 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	GTF1	P53260	183 aa	Predicted RBP	4.66	□□□□□ -1.66
SHE10	YGL228W	YNL092W	P53934	400 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	PIN3	Q06449	215 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	SEN2	P16658	377 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	IFM1	P25038	676 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	CPR4	P25334	318 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	OCH1	P31755	480 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	GLY1	P37303	387 aa	Known RBP	4.66	□□□□□ -1.66
SHE10	YGL228W	FAT1	P38225	669 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	YER137C	P40083	148 aa	Known RBP	4.66	□□□□□ -1.66
SHE10	YGL228W	LSM1	P47017	172 aa	Known RBP	4.66	□□□□□ -1.66
SHE10	YGL228W	YJR011C	P47086	261 aa	Predicted RBP	4.66	□□□□□ -1.66
SHE10	YGL228W	UBP8	P50102	471 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	GIM3	P53900	129 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
SHE10	YGL228W	SED1	Q01589	338 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	FEX1	Q08913	375 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	WTM2	Q12206	467 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	TRM13	Q12383	476 aa		4.66	□□□□□ -1.66
SHE10	YGL228W	URA3	P03962	267 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	ARG80	P07249	177 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	CKS1	P20486	150 aa	Known RBP	4.65	□□□□□ -1.67
SHE10	YGL228W	YCR016W	P25617	290 aa	Known RBP	4.65	□□□□□ -1.67
SHE10	YGL228W	MTR2	P34232	184 aa	Known RBP	4.65	□□□□□ -1.67
SHE10	YGL228W	NAT2	P37293	288 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	SWD3	P38123	315 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	YBR197C	P38306	217 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	RRF1	P38771	230 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	YMR144W	P40214	342 aa	Known RBP	4.65	□□□□□ -1.67
SHE10	YGL228W	YGR210C	P42942	411 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	TAF4	P50105	388 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	ALG9	P53868	555 aa	Known RBP	4.65	□□□□□ -1.67
SHE10	YGL228W	COA4	Q05809	96 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	RRP15	Q06511	250 aa	Predicted RBP	4.65	□□□□□ -1.67
SHE10	YGL228W	YLR108C	Q12259	485 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	YOR192C-C	Q3E736	78 aa		4.65	□□□□□ -1.67
SHE10	YGL228W	UBA3	Q99344	299 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms