RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W VBA1Q04301 562 aa4.7□□□□□ -1.66
SHE10YGL228W SPR28Q04921 423 aa4.7□□□□□ -1.66
SHE10YGL228W MRL1Q06815 381 aa4.7□□□□□ -1.66
SHE10YGL228W RFU1Q08003 200 aa4.7□□□□□ -1.66
SHE10YGL228W RRS1Q08746 203 aaKnown RBP4.7□□□□□ -1.66
SHE10YGL228W BPH1P25356 2167 aa4.7□□□□□ -1.66
SHE10YGL228W SAR1P20606 190 aaKnown RBP4.69□□□□□ -1.66
SHE10YGL228W MSS1P32559 526 aaPredicted RBP4.69□□□□□ -1.66
SHE10YGL228W ARC40P38328 384 aaKnown RBP4.69□□□□□ -1.66
SHE10YGL228W YER079WP40052 210 aaKnown RBP4.69□□□□□ -1.66
SHE10YGL228W YIL029CP40538 142 aa4.69□□□□□ -1.66
SHE10YGL228W UBC13P52490 153 aa4.69□□□□□ -1.66
SHE10YGL228W DLT1Q04216 342 aa4.69□□□□□ -1.66
SHE10YGL228W YOR385WQ08909 290 aa4.69□□□□□ -1.66
SHE10YGL228W YLR125WQ12138 136 aa4.69□□□□□ -1.66
SHE10YGL228W FSH3Q99369 266 aa4.69□□□□□ -1.66
SHE10YGL228W AAC1P04710 309 aa4.69□□□□□ -1.66
SHE10YGL228W UTP30P36144 274 aaKnown RBP4.69□□□□□ -1.66
SHE10YGL228W GWT1P47026 490 aa4.69□□□□□ -1.66
SHE10YGL228W SSN8P47821 323 aa4.69□□□□□ -1.66
SHE10YGL228W GPG1P53130 126 aa4.69□□□□□ -1.66
SHE10YGL228W ACS1Q01574 713 aa4.69□□□□□ -1.66
SHE10YGL228W NRG1Q03125 231 aa4.69□□□□□ -1.66
SHE10YGL228W GAT3Q07928 141 aa4.69□□□□□ -1.66
SHE10YGL228W MPD1Q12404 318 aaKnown RBP4.69□□□□□ -1.66
SHE10YGL228W NUM1Q00402 2748 aa4.68□□□□□ -1.66
SHE10YGL228W RPS31P05759 152 aaKnown RBP4.68□□□□□ -1.66
SHE10YGL228W MET3P08536 511 aa4.68□□□□□ -1.66
SHE10YGL228W RFA3P26755 122 aaKnown RBP4.68□□□□□ -1.66
SHE10YGL228W PEX4P29340 183 aa4.68□□□□□ -1.66
SHE10YGL228W PAN3P36102 679 aaPredicted RBP4.68□□□□□ -1.66
SHE10YGL228W YBR220CP38318 560 aa4.68□□□□□ -1.66
SHE10YGL228W ARO9P38840 513 aaPredicted RBP4.68□□□□□ -1.66
SHE10YGL228W YML018CQ03730 393 aa4.68□□□□□ -1.66
SHE10YGL228W YPR098CQ06089 161 aa4.68□□□□□ -1.66
SHE10YGL228W YTH1Q06102 208 aaPredicted RBP4.68□□□□□ -1.66
SHE10YGL228W SYM1Q06563 197 aa4.68□□□□□ -1.66
SHE10YGL228W YOR186WQ08560 144 aa4.68□□□□□ -1.66
SHE10YGL228W EAF3Q12432 401 aa4.68□□□□□ -1.66
SHE10YGL228W PET20Q99373 253 aa4.68□□□□□ -1.66
SHE10YGL228W SSA3P09435 649 aaKnown RBP4.67□□□□□ -1.66
SHE10YGL228W SPS100P13130 326 aa4.67□□□□□ -1.66
SHE10YGL228W CDC34P14682 295 aa4.67□□□□□ -1.66
SHE10YGL228W ERG3P32353 365 aa4.67□□□□□ -1.66
SHE10YGL228W FLO10P36170 1169 aa4.67□□□□□ -1.66
SHE10YGL228W YGP1P38616 354 aaKnown RBP4.67□□□□□ -1.66
SHE10YGL228W EGT2P42835 1041 aa4.67□□□□□ -1.66
SHE10YGL228W GNA1P43577 159 aaPredicted RBP4.67□□□□□ -1.66
SHE10YGL228W SKP1P52286 194 aa4.67□□□□□ -1.66
SHE10YGL228W CRZ1P53968 678 aa4.67□□□□□ -1.66
SHE10YGL228W SKO1Q02100 647 aa4.67□□□□□ -1.66
SHE10YGL228W YDC1Q02896 317 aa4.67□□□□□ -1.66
SHE10YGL228W YMR279CQ03263 540 aa4.67□□□□□ -1.66
SHE10YGL228W YDR248CQ03786 193 aa4.67□□□□□ -1.66
SHE10YGL228W YDR114CQ04597 100 aa4.67□□□□□ -1.66
SHE10YGL228W FEX2Q08991 375 aa4.67□□□□□ -1.66
SHE10YGL228W RPL25P04456 142 aaKnown RBP4.66□□□□□ -1.66
SHE10YGL228W PET122P10355 254 aa4.66□□□□□ -1.66
SHE10YGL228W DIT1P21623 536 aa4.66□□□□□ -1.66
SHE10YGL228W IMP1P28627 190 aa4.66□□□□□ -1.66
SHE10YGL228W MRP17P28778 131 aa4.66□□□□□ -1.66
SHE10YGL228W POP8P38208 133 aa4.66□□□□□ -1.66
SHE10YGL228W VMA22P38784 181 aa4.66□□□□□ -1.66
SHE10YGL228W GTF1P53260 183 aaPredicted RBP4.66□□□□□ -1.66
SHE10YGL228W YNL092WP53934 400 aa4.66□□□□□ -1.66
SHE10YGL228W PIN3Q06449 215 aa4.66□□□□□ -1.66
SHE10YGL228W SEN2P16658 377 aa4.66□□□□□ -1.66
SHE10YGL228W IFM1P25038 676 aa4.66□□□□□ -1.66
SHE10YGL228W CPR4P25334 318 aa4.66□□□□□ -1.66
SHE10YGL228W OCH1P31755 480 aa4.66□□□□□ -1.66
SHE10YGL228W GLY1P37303 387 aaKnown RBP4.66□□□□□ -1.66
SHE10YGL228W FAT1P38225 669 aa4.66□□□□□ -1.66
SHE10YGL228W YER137CP40083 148 aaKnown RBP4.66□□□□□ -1.66
SHE10YGL228W LSM1P47017 172 aaKnown RBP4.66□□□□□ -1.66
SHE10YGL228W YJR011CP47086 261 aaPredicted RBP4.66□□□□□ -1.66
SHE10YGL228W UBP8P50102 471 aa4.66□□□□□ -1.66
SHE10YGL228W GIM3P53900 129 aa4.66□□□□□ -1.66
SHE10YGL228W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SHE10YGL228W SED1Q01589 338 aa4.66□□□□□ -1.66
SHE10YGL228W FEX1Q08913 375 aa4.66□□□□□ -1.66
SHE10YGL228W WTM2Q12206 467 aa4.66□□□□□ -1.66
SHE10YGL228W TRM13Q12383 476 aa4.66□□□□□ -1.66
SHE10YGL228W URA3P03962 267 aa4.65□□□□□ -1.67
SHE10YGL228W ARG80P07249 177 aa4.65□□□□□ -1.67
SHE10YGL228W CKS1P20486 150 aaKnown RBP4.65□□□□□ -1.67
SHE10YGL228W YCR016WP25617 290 aaKnown RBP4.65□□□□□ -1.67
SHE10YGL228W MTR2P34232 184 aaKnown RBP4.65□□□□□ -1.67
SHE10YGL228W NAT2P37293 288 aa4.65□□□□□ -1.67
SHE10YGL228W SWD3P38123 315 aa4.65□□□□□ -1.67
SHE10YGL228W YBR197CP38306 217 aa4.65□□□□□ -1.67
SHE10YGL228W RRF1P38771 230 aa4.65□□□□□ -1.67
SHE10YGL228W YMR144WP40214 342 aaKnown RBP4.65□□□□□ -1.67
SHE10YGL228W YGR210CP42942 411 aa4.65□□□□□ -1.67
SHE10YGL228W TAF4P50105 388 aa4.65□□□□□ -1.67
SHE10YGL228W ALG9P53868 555 aaKnown RBP4.65□□□□□ -1.67
SHE10YGL228W COA4Q05809 96 aa4.65□□□□□ -1.67
SHE10YGL228W RRP15Q06511 250 aaPredicted RBP4.65□□□□□ -1.67
SHE10YGL228W YLR108CQ12259 485 aa4.65□□□□□ -1.67
SHE10YGL228W YOR192C-CQ3E736 78 aa4.65□□□□□ -1.67
SHE10YGL228W UBA3Q99344 299 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms