RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeastyeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMC1YGL006W NSA1P53136 463 aaPredicted RBP3.81□□□□□ -1.8
PMC1YGL006W YGR066CP53242 292 aa3.81□□□□□ -1.8
PMC1YGL006W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
PMC1YGL006W SEC13Q04491 297 aaKnown RBP3.81□□□□□ -1.8
PMC1YGL006W YPR127WQ06494 345 aa3.81□□□□□ -1.8
PMC1YGL006W WTM2Q12206 467 aa3.81□□□□□ -1.8
PMC1YGL006W TIM12P32830 109 aa3.81□□□□□ -1.8
PMC1YGL006W TRM7P38238 310 aaKnown RBP3.81□□□□□ -1.8
PMC1YGL006W UMP1P38293 148 aa3.81□□□□□ -1.8
PMC1YGL006W PRP39P39682 629 aaKnown RBP3.81□□□□□ -1.8
PMC1YGL006W MOB2P43563 287 aa3.81□□□□□ -1.8
PMC1YGL006W EST3Q03096 181 aa3.81□□□□□ -1.8
PMC1YGL006W YML053CQ04978 212 aa3.81□□□□□ -1.8
PMC1YGL006W RSF1Q05043 376 aa3.81□□□□□ -1.8
PMC1YGL006W YLR456WQ06199 204 aa3.81□□□□□ -1.8
PMC1YGL006W YBR096WP38256 230 aa3.8□□□□□ -1.8
PMC1YGL006W YIL089WP40500 205 aa3.8□□□□□ -1.8
PMC1YGL006W HIT1P46973 164 aa3.8□□□□□ -1.8
PMC1YGL006W OST3P48439 350 aa3.8□□□□□ -1.8
PMC1YGL006W YNR066CP53752 436 aa3.8□□□□□ -1.8
PMC1YGL006W APJ1P53940 528 aa3.8□□□□□ -1.8
PMC1YGL006W YDR366CP87287 132 aa3.8□□□□□ -1.8
PMC1YGL006W YPL039WQ03080 316 aa3.8□□□□□ -1.8
PMC1YGL006W NAT3Q06504 195 aa3.8□□□□□ -1.8
PMC1YGL006W MED7Q08278 222 aa3.8□□□□□ -1.8
PMC1YGL006W SUT2Q12286 268 aa3.8□□□□□ -1.8
PMC1YGL006W SWM1Q12379 170 aa3.8□□□□□ -1.8
PMC1YGL006W YLR111WQ12528 110 aa3.8□□□□□ -1.8
PMC1YGL006W ADE8P04161 214 aa3.8□□□□□ -1.8
PMC1YGL006W DPM1P14020 267 aaKnown RBP3.8□□□□□ -1.8
PMC1YGL006W MEK1P24719 497 aaPredicted RBP3.8□□□□□ -1.8
PMC1YGL006W VBA2P38358 474 aaKnown RBP3.8□□□□□ -1.8
PMC1YGL006W HEM14P40012 539 aa3.8□□□□□ -1.8
PMC1YGL006W LRO1P40345 661 aa3.8□□□□□ -1.8
PMC1YGL006W YFR020WP43600 232 aa3.8□□□□□ -1.8
PMC1YGL006W BNS1P50084 137 aa3.8□□□□□ -1.8
PMC1YGL006W DAD3P69850 94 aa3.8□□□□□ -1.8
PMC1YGL006W NRG1Q03125 231 aa3.8□□□□□ -1.8
PMC1YGL006W TMN2Q04562 672 aa3.8□□□□□ -1.8
PMC1YGL006W YDR286CQ05530 114 aa3.8□□□□□ -1.8
PMC1YGL006W YOR385WQ08909 290 aa3.8□□□□□ -1.8
PMC1YGL006W SUL2Q12325 893 aa3.8□□□□□ -1.8
PMC1YGL006W YGL010WP25338 174 aa3.79□□□□□ -1.8
PMC1YGL006W RFA2P26754 273 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W GPI16P38875 610 aa3.79□□□□□ -1.8
PMC1YGL006W SKN7P38889 622 aa3.79□□□□□ -1.8
PMC1YGL006W YEA6P39953 335 aa3.79□□□□□ -1.8
PMC1YGL006W YER158CP40095 573 aa3.79□□□□□ -1.8
PMC1YGL006W RSM10Q03201 203 aa3.79□□□□□ -1.8
PMC1YGL006W AVO2Q04749 426 aa3.79□□□□□ -1.8
PMC1YGL006W MSC3Q05812 728 aa3.79□□□□□ -1.8
PMC1YGL006W LAS17Q12446 633 aa3.79□□□□□ -1.8
PMC1YGL006W YDR524C-BQ3E6R4 66 aa3.79□□□□□ -1.8
PMC1YGL006W ACC1Q00955 2233 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W QCR7P00128 127 aa3.79□□□□□ -1.8
PMC1YGL006W RPL9AP05738 191 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W RPL1AP0CX43 217 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W RPL1BP0CX44 217 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W HAP3P13434 144 aa3.79□□□□□ -1.8
PMC1YGL006W SLY41P22215 453 aa3.79□□□□□ -1.8
PMC1YGL006W EHD3P28817 500 aa3.79□□□□□ -1.8
PMC1YGL006W HOG1P32485 435 aa3.79□□□□□ -1.8
PMC1YGL006W SUI1P32911 108 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W AVT5P38176 459 aa3.79□□□□□ -1.8
PMC1YGL006W YIL067CP40514 678 aa3.79□□□□□ -1.8
PMC1YGL006W RPL9BP51401 191 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W NIF3P53081 288 aa3.79□□□□□ -1.8
PMC1YGL006W TPC1P53257 314 aa3.79□□□□□ -1.8
PMC1YGL006W YMR090WQ04304 227 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W COX19Q3E731 98 aa3.79□□□□□ -1.8
PMC1YGL006W LDH1P38139 375 aa3.79□□□□□ -1.8
PMC1YGL006W GGC1P38988 300 aa3.79□□□□□ -1.8
PMC1YGL006W POP2P39008 433 aa3.79□□□□□ -1.8
PMC1YGL006W AGE2P40529 298 aa3.79□□□□□ -1.8
PMC1YGL006W MGA1P53050 456 aa3.79□□□□□ -1.8
PMC1YGL006W SNO2P53823 222 aa3.79□□□□□ -1.8
PMC1YGL006W RCE1Q03530 315 aa3.79□□□□□ -1.8
PMC1YGL006W ROT1Q03691 256 aa3.79□□□□□ -1.8
PMC1YGL006W YMR310CQ04867 317 aaPredicted RBP3.79□□□□□ -1.8
PMC1YGL006W PUS5Q06244 254 aa3.79□□□□□ -1.8
PMC1YGL006W DET1Q99288 334 aaKnown RBP3.79□□□□□ -1.8
PMC1YGL006W COX9P07255 59 aa3.78□□□□□ -1.8
PMC1YGL006W DEG1P31115 442 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W LSM2P38203 95 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W YPT31P38555 223 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W YIL108WP40483 696 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W RPA43P46669 326 aa3.78□□□□□ -1.8
PMC1YGL006W SNT309Q06091 175 aaPredicted RBP3.78□□□□□ -1.8
PMC1YGL006W AIM45Q12480 344 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W PAR32Q12515 295 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W SEC16P48415 2195 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W YMR084WA2P2R3 262 aa3.78□□□□□ -1.8
PMC1YGL006W RPL25P04456 142 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W MTF1P14908 341 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W CKA1P15790 372 aa3.78□□□□□ -1.8
PMC1YGL006W SCL1P21243 252 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W FMT1P32785 401 aa3.78□□□□□ -1.8
PMC1YGL006W MOT2P34909 587 aaKnown RBP3.78□□□□□ -1.8
PMC1YGL006W YHR180WP38868 163 aa3.78□□□□□ -1.8
PMC1YGL006W AQR1P53943 586 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms