RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C SCP1Q08873 200 aa11.21□□□□□ -0.61
PHO4YFR034C HUT1Q12520 339 aa11.21□□□□□ -0.61
PHO4YFR034C IRA1P18963 3092 aa11.2□□□□□ -0.62
PHO4YFR034C YPC1P38298 316 aa11.2□□□□□ -0.62
PHO4YFR034C MID1P41821 548 aa11.2□□□□□ -0.62
PHO4YFR034C UBP8P50102 471 aa11.2□□□□□ -0.62
PHO4YFR034C SPR28Q04921 423 aa11.2□□□□□ -0.62
PHO4YFR034C RFU1Q08003 200 aa11.2□□□□□ -0.62
PHO4YFR034C YOL024WQ08172 172 aa11.2□□□□□ -0.62
PHO4YFR034C AEP3Q12089 606 aa11.2□□□□□ -0.62
PHO4YFR034C CDC28P00546 298 aaKnown RBP11.19□□□□□ -0.62
PHO4YFR034C TPI1P00942 248 aaKnown RBP11.19□□□□□ -0.62
PHO4YFR034C MRP20P32387 263 aa11.19□□□□□ -0.62
PHO4YFR034C MOH1P38191 138 aa11.19□□□□□ -0.62
PHO4YFR034C FIG1P38224 298 aa11.19□□□□□ -0.62
PHO4YFR034C MTC6P38849 526 aa11.19□□□□□ -0.62
PHO4YFR034C YEL057CP39983 233 aa11.19□□□□□ -0.62
PHO4YFR034C PHB1P40961 287 aa11.19□□□□□ -0.62
PHO4YFR034C UFD1P53044 361 aa11.19□□□□□ -0.62
PHO4YFR034C UBA3Q99344 299 aa11.19□□□□□ -0.62
PHO4YFR034C SEC22P22214 214 aa11.18□□□□□ -0.62
PHO4YFR034C PEX4P29340 183 aa11.18□□□□□ -0.62
PHO4YFR034C DEG1P31115 442 aaKnown RBP11.18□□□□□ -0.62
PHO4YFR034C MRPS5P33759 307 aa11.18□□□□□ -0.62
PHO4YFR034C COS8P38723 381 aa11.18□□□□□ -0.62
PHO4YFR034C BMT5P40493 336 aa11.18□□□□□ -0.62
PHO4YFR034C GWT1P47026 490 aa11.18□□□□□ -0.62
PHO4YFR034C YJR011CP47086 261 aaPredicted RBP11.18□□□□□ -0.62
PHO4YFR034C NRG1Q03125 231 aa11.18□□□□□ -0.62
PHO4YFR034C TFC7Q12415 435 aa11.18□□□□□ -0.62
PHO4YFR034C YBR085C-AO43137 85 aa11.17□□□□□ -0.62
PHO4YFR034C TAD2P47058 250 aa11.17□□□□□ -0.62
PHO4YFR034C SSN8P47821 323 aa11.17□□□□□ -0.62
PHO4YFR034C UBC12P52491 188 aa11.17□□□□□ -0.62
PHO4YFR034C RTT103Q05543 409 aa11.17□□□□□ -0.62
PHO4YFR034C ANT1Q06497 328 aa11.17□□□□□ -0.62
PHO4YFR034C VAM3Q12241 283 aa11.17□□□□□ -0.62
PHO4YFR034C MED4Q12343 284 aa11.17□□□□□ -0.62
PHO4YFR034C YJR112W-AQ3E743 109 aa11.17□□□□□ -0.62
PHO4YFR034C YLL053CP0CD98 152 aa11.16□□□□□ -0.62
PHO4YFR034C ARO3P14843 370 aaKnown RBP11.16□□□□□ -0.62
PHO4YFR034C TIP1P27654 210 aaPredicted RBP11.16□□□□□ -0.62
PHO4YFR034C REC114P32841 428 aa11.16□□□□□ -0.62
PHO4YFR034C NAT2P37293 288 aa11.16□□□□□ -0.62
PHO4YFR034C ARC40P38328 384 aaKnown RBP11.16□□□□□ -0.62
PHO4YFR034C STS1P38637 319 aa11.16□□□□□ -0.62
PHO4YFR034C YIR035CP40579 254 aa11.16□□□□□ -0.62
PHO4YFR034C YJR111CP47148 283 aaKnown RBP11.16□□□□□ -0.62
PHO4YFR034C RCE1Q03530 315 aa11.16□□□□□ -0.62
PHO4YFR034C YDR391CQ04170 232 aa11.16□□□□□ -0.62
PHO4YFR034C NOC4Q06512 552 aaPredicted RBP11.16□□□□□ -0.62
PHO4YFR034C MSL5Q12186 476 aaKnown RBP RIP-Chip data11.16□□□□□ -0.62not detected
PHO4YFR034C ATP14Q12349 124 aa11.16□□□□□ -0.62
PHO4YFR034C MCH2P36032 473 aa11.15□□□□□ -0.62
PHO4YFR034C YBR197CP38306 217 aa11.15□□□□□ -0.62
PHO4YFR034C SRP1Q02821 542 aaKnown RBP11.15□□□□□ -0.62
PHO4YFR034C RAF1Q06891 181 aa11.15□□□□□ -0.62
PHO4YFR034C YOR186WQ08560 144 aa11.15□□□□□ -0.62
PHO4YFR034C YPL278CQ08990 100 aa11.15□□□□□ -0.62
PHO4YFR034C REP2P03872 296 aa11.14□□□□□ -0.63
PHO4YFR034C GAL1P04385 528 aa11.14□□□□□ -0.63
PHO4YFR034C RPL7AP05737 244 aaKnown RBP11.14□□□□□ -0.63
PHO4YFR034C MIR1P23641 311 aaKnown RBP11.14□□□□□ -0.63
PHO4YFR034C ATG15P25641 520 aa11.14□□□□□ -0.63
PHO4YFR034C FAT1P38225 669 aa11.14□□□□□ -0.63
PHO4YFR034C LAG1P38703 411 aa11.14□□□□□ -0.63
PHO4YFR034C OSH7P38755 437 aa11.14□□□□□ -0.63
PHO4YFR034C YER084WP40057 128 aa11.14□□□□□ -0.63
PHO4YFR034C ISU1Q03020 165 aa11.14□□□□□ -0.63
PHO4YFR034C RPL7BQ12213 244 aaKnown RBP11.14□□□□□ -0.63
PHO4YFR034C EAF3Q12432 401 aa11.14□□□□□ -0.63
PHO4YFR034C SPS4P09937 338 aa11.13□□□□□ -0.63
PHO4YFR034C SAG1P20840 650 aa11.13□□□□□ -0.63
PHO4YFR034C PDC2P32896 925 aa11.13□□□□□ -0.63
PHO4YFR034C GPP1P41277 250 aaKnown RBP11.13□□□□□ -0.63
PHO4YFR034C RPS0BP46654 252 aaKnown RBP11.13□□□□□ -0.63
PHO4YFR034C TIM44Q01852 431 aa11.13□□□□□ -0.63
PHO4YFR034C THI74Q04083 370 aa11.13□□□□□ -0.63
PHO4YFR034C NCE102Q12207 173 aaRIP-Chip data11.13□□□□□ -0.63not detected
PHO4YFR034C QCR2P07257 368 aa11.12□□□□□ -0.63
PHO4YFR034C OCH1P31755 480 aa11.12□□□□□ -0.63
PHO4YFR034C SRY1P36007 326 aa11.12□□□□□ -0.63
PHO4YFR034C YMR262WP38430 313 aa11.12□□□□□ -0.63
PHO4YFR034C FLX1P40464 311 aa11.12□□□□□ -0.63
PHO4YFR034C YIL029CP40538 142 aa11.12□□□□□ -0.63
PHO4YFR034C OST1P41543 476 aaKnown RBP11.12□□□□□ -0.63
PHO4YFR034C PNC1P53184 216 aaKnown RBP11.12□□□□□ -0.63
PHO4YFR034C RPN14P53196 417 aa11.12□□□□□ -0.63
PHO4YFR034C ACT1P60010 375 aaKnown RBP11.12□□□□□ -0.63
PHO4YFR034C FIT3Q08907 204 aa11.12□□□□□ -0.63
PHO4YFR034C YCR101CP25607 182 aa11.11□□□□□ -0.63
PHO4YFR034C GLC7P32598 312 aaKnown RBP11.11□□□□□ -0.63
PHO4YFR034C EMP24P32803 203 aaKnown RBP11.11□□□□□ -0.63
PHO4YFR034C GCV3P39726 170 aaPredicted RBP11.11□□□□□ -0.63
PHO4YFR034C YER079WP40052 210 aaKnown RBP11.11□□□□□ -0.63
PHO4YFR034C YHC3P47040 408 aa11.11□□□□□ -0.63
PHO4YFR034C YDR286CQ05530 114 aa11.11□□□□□ -0.63
PHO4YFR034C RRT7Q07829 113 aa11.11□□□□□ -0.63
PHO4YFR034C GRC3Q07845 632 aa11.11□□□□□ -0.63
PHO4YFR034C RPL25P04456 142 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms