RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	URA6	P15700	204 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	SAR1	P20606	190 aa	Known RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	DIT1	P21623	536 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	ARO4	P32449	370 aa	Known RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	MSS1	P32559	526 aa	Predicted RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	GLC7	P32598	312 aa	Known RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	YKL063C	P35725	167 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	FLX1	P40464	311 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	OST1	P41543	476 aa	Known RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	SNX4	P47057	423 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	AIM25	P47140	327 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	BXI1	P48558	297 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	UBC13	P52490	153 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	NSA1	P53136	463 aa	Predicted RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	DLT1	Q04216	342 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	TMC1	Q08422	150 aa	Predicted RBP	5.55	□□□□□ -1.52
VMA3	YEL027W	RNH203	Q12338	110 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	RTR2	Q12378	196 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	SPO24	Q3E752	67 aa		5.55	□□□□□ -1.52
VMA3	YEL027W	GCD1	P09032	578 aa	Predicted RBP	5.54	□□□□□ -1.52
VMA3	YEL027W	SPS4	P09937	338 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	PUP1	P25043	261 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	RFA3	P26755	122 aa	Known RBP	5.54	□□□□□ -1.52
VMA3	YEL027W	MTC7	P32633	139 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	FAT1	P38225	669 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	YHR122W	P38829	231 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	YND1	P40009	630 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	YKE4	P40544	346 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	YGR042W	P53227	271 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	GIM3	P53900	129 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	UTP15	Q04305	513 aa	Known RBP	5.54	□□□□□ -1.52
VMA3	YEL027W	YPR098C	Q06089	161 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	RSC58	Q07979	502 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	WHI5	Q12416	295 aa		5.54	□□□□□ -1.52
VMA3	YEL027W	RPL3	P14126	387 aa	Known RBP	5.53	□□□□□ -1.52
VMA3	YEL027W	SAG1	P20840	650 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	VMA5	P31412	392 aa	Known RBP	5.53	□□□□□ -1.52
VMA3	YEL027W	YBL010C	P32788	280 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	MRPL36	P36531	177 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	NAT2	P37293	288 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	YIL029C	P40538	142 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	GNA1	P43577	159 aa	Predicted RBP	5.53	□□□□□ -1.52
VMA3	YEL027W	SKP1	P52286	194 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	TYW3	P53177	273 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	CRZ1	P53968	678 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	YDC1	Q02896	317 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	DCS1	Q06151	350 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	YLR031W	Q07978	186 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	ATG31	Q12421	196 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	FSH3	Q99369	266 aa		5.53	□□□□□ -1.52
VMA3	YEL027W	BPH1	P25356	2167 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	SPS2	P08459	502 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	CDC23	P16522	626 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	IFM1	P25038	676 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	ATG22	P25568	528 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	SPC29	P33419	253 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	YER079W	P40052	210 aa	Known RBP	5.52	□□□□□ -1.53
VMA3	YEL027W	YER137C	P40083	148 aa	Known RBP	5.52	□□□□□ -1.53
VMA3	YEL027W	YIL012W	P40551	113 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	EGT2	P42835	1041 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	OTU1	P43558	301 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	SSN8	P47821	323 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	TEX1	P53851	422 aa	Known RBP	5.52	□□□□□ -1.53
VMA3	YEL027W	DID2	P69771	204 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	SKO1	Q02100	647 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	NGL2	Q03264	515 aa	Known RBP	5.52	□□□□□ -1.53
VMA3	YEL027W	TY1A-MR1	Q04215	440 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	PIN3	Q06449	215 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	ERP4	Q12450	207 aa		5.52	□□□□□ -1.53
VMA3	YEL027W	TDH2	P00358	332 aa	Known RBP	5.51	□□□□□ -1.53
VMA3	YEL027W	RPL25	P04456	142 aa	Known RBP	5.51	□□□□□ -1.53
VMA3	YEL027W	RPS31	P05759	152 aa	Known RBP	5.51	□□□□□ -1.53
VMA3	YEL027W	RPS23A	P0CX29	145 aa	Known RBP	5.51	□□□□□ -1.53
VMA3	YEL027W	RPS23B	P0CX30	145 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	RNA14	P25298	677 aa	Known RBP	5.51	□□□□□ -1.53
VMA3	YEL027W	YCR101C	P25607	182 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	DAL80	P26343	269 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	RNP1	P32385	249 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	VMA8	P32610	256 aa	Known RBP	5.51	□□□□□ -1.53
VMA3	YEL027W	VAM7	P32912	316 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	MRPL3	P36516	390 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	UFD1	P53044	361 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	YDR248C	Q03786	193 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	YNG1	Q08465	219 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	YOR385W	Q08909	290 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	GEP5	Q12393	293 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	HUT1	Q12520	339 aa		5.51	□□□□□ -1.53
VMA3	YEL027W	NHP6B	P11633	99 aa	Known RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	HNM1	P19807	563 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	RFA1	P22336	621 aa	Known RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	YCP4	P25349	247 aa	Known RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	PEX4	P29340	183 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	YKL107W	P34251	309 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	MRPL27	P36526	146 aa	Predicted RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	LSM12	P38828	187 aa	Known RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	ECM14	P38836	430 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	LNP1	P38878	278 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	PHM8	P40025	321 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	LSM1	P47017	172 aa	Known RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	GWT1	P47026	490 aa		5.5	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms