RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A SSO1P32867 290 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A RIB1P38066 345 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A MIC12P38341 106 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A COS8P38723 381 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A RTC3P38804 111 aaPredicted RBP2.17□□□□□ -2.06
YDR170W-AYDR170W-A TIF34P40217 347 aaKnown RBP2.17□□□□□ -2.06
YDR170W-AYDR170W-A OST2P46964 130 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A PIR5P46999 287 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A NSA1P53136 463 aaPredicted RBP2.17□□□□□ -2.06
YDR170W-AYDR170W-A YLR179CQ06252 201 aaKnown RBP2.17□□□□□ -2.06
YDR170W-AYDR170W-A YPR172WQ06608 200 aa2.17□□□□□ -2.06
YDR170W-AYDR170W-A YBR121C-AP0C5L4 52 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A YKT6P36015 200 aaKnown RBP2.16□□□□□ -2.06
YDR170W-AYDR170W-A RCN1P36054 211 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A YKR032WP36127 104 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A COG3P40094 801 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A YJL016WP47072 561 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A HAM1P47119 197 aaKnown RBP2.16□□□□□ -2.06
YDR170W-AYDR170W-A ILM1P47155 203 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A TRM9P49957 279 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A RMR1P53060 241 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A INM2Q05533 292 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A CDC123Q05791 360 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A CLP1Q08685 445 aaPredicted RBP2.16□□□□□ -2.06
YDR170W-AYDR170W-A TPO4Q12256 659 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A YKL183C-AQ3E765 70 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A YPL229WQ99395 206 aa2.16□□□□□ -2.06
YDR170W-AYDR170W-A RPL26AP05743 127 aaKnown RBP2.15□□□□□ -2.07
YDR170W-AYDR170W-A ERG24P32462 438 aaKnown RBP2.15□□□□□ -2.07
YDR170W-AYDR170W-A YGP1P38616 354 aaKnown RBP2.15□□□□□ -2.07
YDR170W-AYDR170W-A ERG28P40030 148 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A YGL159WP53110 370 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A TOS8P53147 276 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A RPL26BP53221 127 aaKnown RBP2.15□□□□□ -2.07
YDR170W-AYDR170W-A SSU72P53538 206 aaPredicted RBP2.15□□□□□ -2.07
YDR170W-AYDR170W-A PEX12Q04370 399 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A YLR030WQ07967 263 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A MSA1Q08471 629 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A BBP1Q12365 385 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A DCN1Q12395 269 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A GIS3Q12418 502 aa2.15□□□□□ -2.07
YDR170W-AYDR170W-A IPP1P00817 287 aaKnown RBP2.14□□□□□ -2.07
YDR170W-AYDR170W-A CDC33P07260 213 aaKnown RBP2.14□□□□□ -2.07
YDR170W-AYDR170W-A STE18P18852 110 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A MSA2P36157 363 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A GTR2P53290 341 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A FYV6P53913 173 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A BNA7Q04066 261 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A GRH1Q04410 372 aaKnown RBP2.14□□□□□ -2.07
YDR170W-AYDR170W-A YPL257WQ08974 193 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A ADF1Q2V2Q1 113 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A SAS5Q99314 248 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A HTL1Q9URQ5 78 aa2.14□□□□□ -2.07
YDR170W-AYDR170W-A PRP18P33411 251 aaPredicted RBP2.13□□□□□ -2.07
YDR170W-AYDR170W-A PRX1P34227 261 aaKnown RBP2.13□□□□□ -2.07
YDR170W-AYDR170W-A CBT1P36038 271 aaPredicted RBP2.13□□□□□ -2.07
YDR170W-AYDR170W-A YER188WP40103 239 aa2.13□□□□□ -2.07
YDR170W-AYDR170W-A PEX17P40155 199 aa2.13□□□□□ -2.07
YDR170W-AYDR170W-A ARC15P40518 154 aaRIP-Chip data2.13□□□□□ -2.07not detected
YDR170W-AYDR170W-A CAT5P41735 233 aa2.13□□□□□ -2.07
YDR170W-AYDR170W-A RAD17P48581 401 aa2.13□□□□□ -2.07
YDR170W-AYDR170W-A BRR6P53062 197 aa2.13□□□□□ -2.07
YDR170W-AYDR170W-A CAB4P53332 305 aa2.13□□□□□ -2.07
YDR170W-AYDR170W-A JIP3O13555 125 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A URA6P15700 204 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A CCA1P21269 546 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A UTR5P32630 166 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A YPT52P36018 234 aaKnown RBP2.12□□□□□ -2.07
YDR170W-AYDR170W-A YNL194CP40169 301 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A RPA43P46669 326 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A YJR056CP47115 236 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A NUP57P48837 541 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A MGA1P53050 456 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A ALG13P53178 202 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A CGR1P53188 120 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A IGO1P53897 168 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A DID2P69771 204 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A YMR279CQ03263 540 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A MIX17Q03667 156 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A YML108WQ03759 105 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A HEM25Q07534 307 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A YOR020W-AQ3E824 90 aa2.12□□□□□ -2.07
YDR170W-AYDR170W-A SIR4P11978 1358 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A YHR139C-AO13536 103 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A COX5AP00424 153 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A RPL28P02406 149 aaKnown RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A Q0255P03881 472 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A CDC36P06100 191 aaPredicted RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A ADH3P07246 375 aaKnown RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A DSF1P0CX08 502 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A YNR073CP0CX09 502 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A CLB6P32943 380 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A SRY1P36007 326 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A SIP3P38717 1229 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A YHL026CP38740 315 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A RPF1P38805 295 aaKnown RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A YHR125WP38831 101 aa2.11□□□□□ -2.07
YDR170W-AYDR170W-A MRPL49P40858 161 aaPredicted RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A CWC23P52868 283 aaPredicted RBP2.11□□□□□ -2.07
YDR170W-AYDR170W-A ERV29P53337 310 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms