RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C RFC4P40339 323 aaKnown RBP2.87□□□□□ -1.95
SHU2YDR078C PFS2P42841 465 aaKnown RBP2.87□□□□□ -1.95
SHU2YDR078C ALG13P53178 202 aa2.87□□□□□ -1.95
SHU2YDR078C YLR179CQ06252 201 aaKnown RBP2.87□□□□□ -1.95
SHU2YDR078C YPR195CQ06594 109 aa2.87□□□□□ -1.95
SHU2YDR078C HEM25Q07534 307 aa2.87□□□□□ -1.95
SHU2YDR078C YDR157WA0A023PZE8 133 aa2.86□□□□□ -1.95
SHU2YDR078C RPL28P02406 149 aaKnown RBP2.86□□□□□ -1.95
SHU2YDR078C TAF14P35189 244 aa2.86□□□□□ -1.95
SHU2YDR078C BRR6P53062 197 aa2.86□□□□□ -1.95
SHU2YDR078C CUS2P53830 285 aaPredicted RBP2.86□□□□□ -1.95
SHU2YDR078C FYV6P53913 173 aa2.86□□□□□ -1.95
SHU2YDR078C YDR114CQ04597 100 aa2.86□□□□□ -1.95
SHU2YDR078C YMR226CQ05016 267 aaKnown RBP2.86□□□□□ -1.95
SHU2YDR078C MSA1Q08471 629 aa2.86□□□□□ -1.95
SHU2YDR078C GET4Q12125 312 aa2.86□□□□□ -1.95
SHU2YDR078C JLP1Q12358 412 aa2.86□□□□□ -1.95
SHU2YDR078C GEP5Q12393 293 aa2.86□□□□□ -1.95
SHU2YDR078C AGC1Q12482 902 aa2.86□□□□□ -1.95
SHU2YDR078C YLR462WO13556 202 aa2.85□□□□□ -1.95
SHU2YDR078C RAD10P06838 210 aa2.85□□□□□ -1.95
SHU2YDR078C URA6P15700 204 aa2.85□□□□□ -1.95
SHU2YDR078C YEL075CP39972 122 aa2.85□□□□□ -1.95
SHU2YDR078C PEX17P40155 199 aa2.85□□□□□ -1.95
SHU2YDR078C HAM1P47119 197 aaKnown RBP2.85□□□□□ -1.95
SHU2YDR078C ADO1P47143 340 aaKnown RBP2.85□□□□□ -1.95
SHU2YDR078C NUP57P48837 541 aa2.85□□□□□ -1.95
SHU2YDR078C YPR172WQ06608 200 aa2.85□□□□□ -1.95
SHU2YDR078C SGA1P08019 549 aa2.84□□□□□ -1.95
SHU2YDR078C IDH1P28834 360 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
SHU2YDR078C ILM1P47155 203 aa2.84□□□□□ -1.95
SHU2YDR078C YGL159WP53110 370 aa2.84□□□□□ -1.95
SHU2YDR078C FAR8Q05040 523 aa2.84□□□□□ -1.95
SHU2YDR078C IPP1P00817 287 aaKnown RBP2.83□□□□□ -1.96
SHU2YDR078C SRY1P36007 326 aa2.83□□□□□ -1.96
SHU2YDR078C CAT5P41735 233 aa2.83□□□□□ -1.96
SHU2YDR078C RSM10Q03201 203 aa2.83□□□□□ -1.96
SHU2YDR078C INM2Q05533 292 aa2.83□□□□□ -1.96
SHU2YDR078C YLR030WQ07967 263 aa2.83□□□□□ -1.96
SHU2YDR078C YOR268CQ08734 132 aa2.83□□□□□ -1.96
SHU2YDR078C FEX1Q08913 375 aa2.83□□□□□ -1.96
SHU2YDR078C FEX2Q08991 375 aa2.83□□□□□ -1.96
SHU2YDR078C YRA1Q12159 226 aaKnown RBP2.83□□□□□ -1.96
SHU2YDR078C COX5AP00424 153 aa2.82□□□□□ -1.96
SHU2YDR078C HTB1P02293 131 aaKnown RBP2.82□□□□□ -1.96
SHU2YDR078C HTB2P02294 131 aa2.82□□□□□ -1.96
SHU2YDR078C MET2P08465 486 aa2.82□□□□□ -1.96
SHU2YDR078C MATALPHA2P0CY08 210 aa2.82□□□□□ -1.96
SHU2YDR078C HMLALPHA2P0CY09 210 aa2.82□□□□□ -1.96
SHU2YDR078C YPK2P18961 677 aa2.82□□□□□ -1.96
SHU2YDR078C ERG24P32462 438 aaKnown RBP2.82□□□□□ -1.96
SHU2YDR078C MGM101P32787 269 aaKnown RBP2.82□□□□□ -1.96
SHU2YDR078C RCN1P36054 211 aa2.82□□□□□ -1.96
SHU2YDR078C MSA2P36157 363 aa2.82□□□□□ -1.96
SHU2YDR078C COS8P38723 381 aa2.82□□□□□ -1.96
SHU2YDR078C IKI1P38874 309 aa2.82□□□□□ -1.96
SHU2YDR078C GIM3P53900 129 aa2.82□□□□□ -1.96
SHU2YDR078C PRM7Q12459 698 aa2.82□□□□□ -1.96
SHU2YDR078C YHR139C-AO13536 103 aa2.81□□□□□ -1.96
SHU2YDR078C CBF1P17106 351 aa2.81□□□□□ -1.96
SHU2YDR078C RFA3P26755 122 aaKnown RBP2.81□□□□□ -1.96
SHU2YDR078C YER084WP40057 128 aa2.81□□□□□ -1.96
SHU2YDR078C GON7P46984 123 aa2.81□□□□□ -1.96
SHU2YDR078C RMR1P53060 241 aa2.81□□□□□ -1.96
SHU2YDR078C ERV29P53337 310 aa2.81□□□□□ -1.96
SHU2YDR078C ATG38Q05789 226 aaKnown RBP2.81□□□□□ -1.96
SHU2YDR078C BBP1Q12365 385 aa2.81□□□□□ -1.96
SHU2YDR078C HTL1Q9URQ5 78 aa2.81□□□□□ -1.96
SHU2YDR078C CHD1P32657 1468 aa2.8□□□□□ -1.96
SHU2YDR078C TUS1Q06412 1307 aa2.8□□□□□ -1.96
SHU2YDR078C CDC28P00546 298 aaKnown RBP2.8□□□□□ -1.96
SHU2YDR078C KRE1P17260 313 aa2.8□□□□□ -1.96
SHU2YDR078C DBF2P22204 572 aa2.8□□□□□ -1.96
SHU2YDR078C RSA4P25382 515 aaKnown RBP2.8□□□□□ -1.96
SHU2YDR078C YGP1P38616 354 aaKnown RBP2.8□□□□□ -1.96
SHU2YDR078C SPO73P40031 143 aa2.8□□□□□ -1.96
SHU2YDR078C RPA43P46669 326 aa2.8□□□□□ -1.96
SHU2YDR078C OST2P46964 130 aa2.8□□□□□ -1.96
SHU2YDR078C PIR5P46999 287 aa2.8□□□□□ -1.96
SHU2YDR078C IRC18P47056 224 aa2.8□□□□□ -1.96
SHU2YDR078C SYF2P53277 215 aaPredicted RBP2.8□□□□□ -1.96
SHU2YDR078C GTR2P53290 341 aa2.8□□□□□ -1.96
SHU2YDR078C YPL257WQ08974 193 aa2.8□□□□□ -1.96
SHU2YDR078C SAC3P46674 1301 aa2.79□□□□□ -1.96
SHU2YDR078C YJR141WP47172 347 aaPredicted RBP2.79□□□□□ -1.96
SHU2YDR078C BXI1P48558 297 aa2.79□□□□□ -1.96
SHU2YDR078C YGL088WP53151 121 aa2.79□□□□□ -1.96
SHU2YDR078C GET1P53192 235 aa2.79□□□□□ -1.96
SHU2YDR078C YML108WQ03759 105 aa2.79□□□□□ -1.96
SHU2YDR078C ABP140Q08641 628 aaKnown RBP2.79□□□□□ -1.96
SHU2YDR078C NIP7Q08962 181 aaKnown RBP2.79□□□□□ -1.96
SHU2YDR078C LSO2Q3E772 92 aaKnown RBP2.79□□□□□ -1.96
SHU2YDR078C YCL012CQ8J0M4 134 aa2.79□□□□□ -1.96
SHU2YDR078C DRS2P39524 1355 aa2.78□□□□□ -1.96
SHU2YDR078C DSF1P0CX08 502 aa2.78□□□□□ -1.96
SHU2YDR078C YNR073CP0CX09 502 aa2.78□□□□□ -1.96
SHU2YDR078C MIG1P27705 504 aa2.78□□□□□ -1.96
SHU2YDR078C YPT52P36018 234 aaKnown RBP2.78□□□□□ -1.96
SHU2YDR078C RPF1P38805 295 aaKnown RBP2.78□□□□□ -1.96
SHU2YDR078C TIF34P40217 347 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 116 ms