RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C XRN1P22147 1528 aaKnown RBP2.41□□□□□ -2.02
RRI1YDL216C Q0255P03881 472 aa2.41□□□□□ -2.02
RRI1YDL216C GOS1P38736 223 aa2.41□□□□□ -2.02
RRI1YDL216C PRM15Q03262 622 aa2.41□□□□□ -2.02
RRI1YDL216C YMR279CQ03263 540 aa2.41□□□□□ -2.02
RRI1YDL216C RRS1Q08746 203 aaKnown RBP2.41□□□□□ -2.02
RRI1YDL216C YOL107WQ12239 342 aa2.41□□□□□ -2.02
RRI1YDL216C SNU23Q12368 194 aaPredicted RBP2.41□□□□□ -2.02
RRI1YDL216C YHR086W-AQ3E746 53 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-LR1P0C2J3 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-FP0CX63 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-GR2P0CX64 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-CP25384 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-DR2Q03494 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY1B-DR1Q03855 1755 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-DR3Q07791 1770 aaKnown RBP2.41□□□□□ -2.02
RRI1YDL216C TY2B-OR1Q12113 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-DR1Q12472 1770 aa2.41□□□□□ -2.02
RRI1YDL216C TY2B-OR2Q12501 1770 aa2.41□□□□□ -2.02
RRI1YDL216C SWI1P09547 1314 aa2.4□□□□□ -2.03
RRI1YDL216C DOA4P32571 926 aa2.4□□□□□ -2.03
RRI1YDL216C FCY21P40039 528 aa2.4□□□□□ -2.03
RRI1YDL216C BAT2P47176 376 aaKnown RBP2.4□□□□□ -2.03
RRI1YDL216C YGR026WP53217 278 aa2.4□□□□□ -2.03
RRI1YDL216C SNZ2P53824 298 aa2.4□□□□□ -2.03
RRI1YDL216C DAD3P69850 94 aa2.4□□□□□ -2.03
RRI1YDL216C YOR186WQ08560 144 aa2.4□□□□□ -2.03
RRI1YDL216C YCT1Q12235 531 aa2.4□□□□□ -2.03
RRI1YDL216C SKI3P17883 1432 aaKnown RBP2.39□□□□□ -2.03
RRI1YDL216C DRS2P39524 1355 aa2.39□□□□□ -2.03
RRI1YDL216C YUH1P35127 236 aa2.39□□□□□ -2.03
RRI1YDL216C YBR096WP38256 230 aa2.39□□□□□ -2.03
RRI1YDL216C ESP1Q03018 1630 aa2.39□□□□□ -2.03
RRI1YDL216C USO1P25386 1790 aa2.38□□□□□ -2.03
RRI1YDL216C YHR125WP38831 101 aa2.38□□□□□ -2.03
RRI1YDL216C BFR1P38934 470 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
RRI1YDL216C RHO3Q00245 231 aaKnown RBP2.38□□□□□ -2.03
RRI1YDL216C MSH5Q12175 901 aa2.38□□□□□ -2.03
RRI1YDL216C ADH3P07246 375 aaKnown RBP2.37□□□□□ -2.03
RRI1YDL216C YHR032W-AP0C5N6 59 aa2.37□□□□□ -2.03
RRI1YDL216C ERG24P32462 438 aaKnown RBP2.37□□□□□ -2.03
RRI1YDL216C MSA2P36157 363 aa2.37□□□□□ -2.03
RRI1YDL216C RMR1P53060 241 aa2.37□□□□□ -2.03
RRI1YDL216C YGL159WP53110 370 aa2.37□□□□□ -2.03
RRI1YDL216C YLR030WQ07967 263 aa2.37□□□□□ -2.03
RRI1YDL216C RRT8Q08219 342 aa2.37□□□□□ -2.03
RRI1YDL216C AKR2Q12013 749 aa2.37□□□□□ -2.03
RRI1YDL216C BOL1Q3E793 110 aa2.37□□□□□ -2.03
RRI1YDL216C PDR15Q04182 1529 aaKnown RBP2.37□□□□□ -2.03
RRI1YDL216C TY1B-HO13535 1793 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-DR5P0C2I2 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-DR6P0C2I3 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-LR2P0C2I5 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-LR3P0C2I6 1755 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C TY1B-PR1P0C2I9 1755 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C TY1B-PR2P0C2J0 1756 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-PR3P0C2J1 1755 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C TY1B-JR1P47098 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-ML2Q03434 1755 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C TY1B-ER1Q03612 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-ML1Q04711 1755 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C TY1B-GR2Q12269 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-OLQ12273 1755 aa2.36□□□□□ -2.03
RRI1YDL216C TY1B-PLQ12414 1755 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C VPS15P22219 1454 aa2.36□□□□□ -2.03
RRI1YDL216C DOG1P38774 246 aa2.36□□□□□ -2.03
RRI1YDL216C SMD3P43321 101 aaKnown RBP2.36□□□□□ -2.03
RRI1YDL216C GTR2P53290 341 aa2.36□□□□□ -2.03
RRI1YDL216C MRPL50P53724 139 aa2.36□□□□□ -2.03
RRI1YDL216C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
RRI1YDL216C INM2Q05533 292 aa2.36□□□□□ -2.03
RRI1YDL216C YLR173WQ06247 608 aa2.36□□□□□ -2.03
RRI1YDL216C YPR172WQ06608 200 aa2.36□□□□□ -2.03
RRI1YDL216C YOR029WQ12243 111 aa2.36□□□□□ -2.03
RRI1YDL216C TY2B-BQ12491 1770 aa2.36□□□□□ -2.03
RRI1YDL216C UFD4P33202 1483 aa2.35□□□□□ -2.03
RRI1YDL216C SPO14P36126 1683 aa2.35□□□□□ -2.03
RRI1YDL216C COX5AP00424 153 aa2.35□□□□□ -2.03
RRI1YDL216C RPT5P33297 434 aaKnown RBP2.35□□□□□ -2.03
RRI1YDL216C YHR127WP38833 243 aaKnown RBP2.35□□□□□ -2.03
RRI1YDL216C BNA6P43619 295 aa2.35□□□□□ -2.03
RRI1YDL216C CHD1P32657 1468 aa2.35□□□□□ -2.03
RRI1YDL216C FIS1P40515 155 aa2.34□□□□□ -2.04
RRI1YDL216C YNL046WP53956 172 aa2.34□□□□□ -2.04
RRI1YDL216C KRE28Q04431 385 aa2.34□□□□□ -2.04
RRI1YDL216C YPL257WQ08974 193 aa2.34□□□□□ -2.04
RRI1YDL216C MED4Q12343 284 aa2.34□□□□□ -2.04
RRI1YDL216C DNF3Q12674 1656 aa2.34□□□□□ -2.04
RRI1YDL216C NUP170P38181 1502 aa2.33□□□□□ -2.04
RRI1YDL216C PDR10P51533 1564 aa2.33□□□□□ -2.04
RRI1YDL216C YJR079WP47126 109 aa2.33□□□□□ -2.04
RRI1YDL216C JHD2P47156 728 aaPredicted RBP2.33□□□□□ -2.04
RRI1YDL216C SEI1Q06058 285 aa2.33□□□□□ -2.04
RRI1YDL216C PAM18Q07914 168 aa2.33□□□□□ -2.04
RRI1YDL216C FKS1P38631 1876 aaKnown RBP2.32□□□□□ -2.04
RRI1YDL216C IPP1P00817 287 aaKnown RBP2.32□□□□□ -2.04
RRI1YDL216C DSF1P0CX08 502 aa2.32□□□□□ -2.04
RRI1YDL216C YNR073CP0CX09 502 aa2.32□□□□□ -2.04
RRI1YDL216C FBA1P14540 359 aaKnown RBP2.32□□□□□ -2.04
RRI1YDL216C YKL075CP36083 450 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms