RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W YHK8P38776 514 aa1.18□□□□□ -2.22
CDC36YDL165W IKI1P38874 309 aa1.18□□□□□ -2.22
CDC36YDL165W ALP1P38971 573 aa1.18□□□□□ -2.22
CDC36YDL165W OXA1P39952 402 aa1.18□□□□□ -2.22
CDC36YDL165W YEA6P39953 335 aa1.18□□□□□ -2.22
CDC36YDL165W KRE29P40026 464 aa1.18□□□□□ -2.22
CDC36YDL165W LCP5P40079 357 aaPredicted RBP1.18□□□□□ -2.22
CDC36YDL165W FAU1P40099 211 aa1.18□□□□□ -2.22
CDC36YDL165W GAT2P40209 560 aa1.18□□□□□ -2.22
CDC36YDL165W YMR144WP40214 342 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W CDC40P40968 455 aaPredicted RBP1.18□□□□□ -2.22
CDC36YDL165W PRM10P42946 383 aa1.18□□□□□ -2.22
CDC36YDL165W FAR3P46671 204 aa1.18□□□□□ -2.22
CDC36YDL165W CPR7P47103 393 aa1.18□□□□□ -2.22
CDC36YDL165W HOC1P47124 396 aa1.18□□□□□ -2.22
CDC36YDL165W DAN1P47178 298 aa1.18□□□□□ -2.22
CDC36YDL165W AVT4P50944 713 aa1.18□□□□□ -2.22
CDC36YDL165W ROG1P53118 685 aa1.18□□□□□ -2.22
CDC36YDL165W MRH4P53166 561 aa1.18□□□□□ -2.22
CDC36YDL165W GTR2P53290 341 aa1.18□□□□□ -2.22
CDC36YDL165W RTT102P53330 157 aa1.18□□□□□ -2.22
CDC36YDL165W ALG11P53954 548 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W UBC7Q02159 165 aa1.18□□□□□ -2.22
CDC36YDL165W SPP2Q02521 185 aa1.18□□□□□ -2.22
CDC36YDL165W STD1Q02794 444 aa1.18□□□□□ -2.22
CDC36YDL165W FMN1Q03778 218 aa1.18□□□□□ -2.22
CDC36YDL165W YDR391CQ04170 232 aa1.18□□□□□ -2.22
CDC36YDL165W HPT1Q04178 221 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W TRM12Q04235 462 aa1.18□□□□□ -2.22
CDC36YDL165W AIM33Q04516 312 aa1.18□□□□□ -2.22
CDC36YDL165W NAT4Q04751 285 aa1.18□□□□□ -2.22
CDC36YDL165W ADH6Q04894 360 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W RRG8Q06109 277 aa1.18□□□□□ -2.22
CDC36YDL165W NOC4Q06512 552 aaPredicted RBP1.18□□□□□ -2.22
CDC36YDL165W SUE1Q06524 206 aa1.18□□□□□ -2.22
CDC36YDL165W IPK1Q06667 281 aa1.18□□□□□ -2.22
CDC36YDL165W YFH1Q07540 174 aa1.18□□□□□ -2.22
CDC36YDL165W SHS1Q07657 551 aa1.18□□□□□ -2.22
CDC36YDL165W PAM18Q07914 168 aa1.18□□□□□ -2.22
CDC36YDL165W AAD15Q08361 143 aa1.18□□□□□ -2.22
CDC36YDL165W DCI1Q08558 271 aa1.18□□□□□ -2.22
CDC36YDL165W YPR202WQ08993 238 aa1.18□□□□□ -2.22
CDC36YDL165W RIM20Q12033 661 aa1.18□□□□□ -2.22
CDC36YDL165W YDR018CQ12185 396 aa1.18□□□□□ -2.22
CDC36YDL165W YCT1Q12235 531 aa1.18□□□□□ -2.22
CDC36YDL165W PST2Q12335 198 aaKnown RBP1.18□□□□□ -2.22
CDC36YDL165W GEP5Q12393 293 aa1.18□□□□□ -2.22
CDC36YDL165W RDI1Q12434 202 aa1.18□□□□□ -2.22
CDC36YDL165W RPL13AQ12690 199 aaPredicted RBP1.18□□□□□ -2.22
CDC36YDL165W TFB5Q3E7C1 72 aaPredicted RBP1.18□□□□□ -2.22
CDC36YDL165W PCC1Q3E833 88 aa1.18□□□□□ -2.22
CDC36YDL165W MED11Q99278 115 aa1.18□□□□□ -2.22
CDC36YDL165W RSF2P46974 1380 aa1.18□□□□□ -2.22
CDC36YDL165W YSP2Q06681 1438 aa1.17□□□□□ -2.22
CDC36YDL165W HAP1P0CE41 1502 aa1.17□□□□□ -2.22
CDC36YDL165W SWR1Q05471 1514 aa1.17□□□□□ -2.22
CDC36YDL165W RPL9AP05738 191 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W TPK3P05986 398 aa1.17□□□□□ -2.22
CDC36YDL165W RAD6P06104 172 aa1.17□□□□□ -2.22
CDC36YDL165W RHO2P06781 192 aa1.17□□□□□ -2.22
CDC36YDL165W ADH3P07246 375 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W SEC4P07560 215 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W PUT1P09368 476 aa1.17□□□□□ -2.22
CDC36YDL165W SNF4P12904 322 aa1.17□□□□□ -2.22
CDC36YDL165W HYP2P23301 157 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W MGT1P26188 188 aa1.17□□□□□ -2.22
CDC36YDL165W BUB3P26449 341 aa1.17□□□□□ -2.22
CDC36YDL165W CWP1P28319 239 aa1.17□□□□□ -2.22
CDC36YDL165W HOM6P31116 359 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W FMT1P32785 401 aa1.17□□□□□ -2.22
CDC36YDL165W CAT2P32796 670 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W PRP18P33411 251 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W YKL162CP36052 402 aa1.17□□□□□ -2.22
CDC36YDL165W SHE2P36068 246 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
CDC36YDL165W PAN3P36102 679 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W RIB1P38066 345 aa1.17□□□□□ -2.22
CDC36YDL165W LSM2P38203 95 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W QDR3P38227 689 aa1.17□□□□□ -2.22
CDC36YDL165W YBR137WP38276 179 aa1.17□□□□□ -2.22
CDC36YDL165W CUE1P38428 203 aa1.17□□□□□ -2.22
CDC36YDL165W YHR035WP38769 630 aa1.17□□□□□ -2.22
CDC36YDL165W DOG2P38773 246 aa1.17□□□□□ -2.22
CDC36YDL165W PFS1P38872 237 aa1.17□□□□□ -2.22
CDC36YDL165W END3P39013 349 aa1.17□□□□□ -2.22
CDC36YDL165W MBB1P39534 108 aa1.17□□□□□ -2.22
CDC36YDL165W SNU13P39990 126 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W SMB1P40018 196 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W RRG9P40156 214 aa1.17□□□□□ -2.22
CDC36YDL165W FIS1P40515 155 aa1.17□□□□□ -2.22
CDC36YDL165W YIL012WP40551 113 aa1.17□□□□□ -2.22
CDC36YDL165W GLR1P41921 483 aaKnown RBP1.17□□□□□ -2.22
CDC36YDL165W YNL320WP42840 284 aa1.17□□□□□ -2.22
CDC36YDL165W CAK1P43568 368 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W TOS3P43637 560 aa1.17□□□□□ -2.22
CDC36YDL165W BUD13P46947 266 aaPredicted RBP1.17□□□□□ -2.22
CDC36YDL165W SFH5P47008 294 aa1.17□□□□□ -2.22
CDC36YDL165W YHC3P47040 408 aa1.17□□□□□ -2.22
CDC36YDL165W YJR012CP47087 207 aa1.17□□□□□ -2.22
CDC36YDL165W NUP57P48837 541 aa1.17□□□□□ -2.22
CDC36YDL165W ASN2P49090 572 aaKnown RBP1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms