RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A HPA3P39979 161 aa13.49□□□□□ -0.25
TRN1tP(UGG)A OST1P41543 476 aaKnown RBP13.49□□□□□ -0.25
TRN1tP(UGG)A YPL199CQ08954 240 aa13.49□□□□□ -0.25
TRN1tP(UGG)A MET3P08536 511 aa13.48□□□□□ -0.25
TRN1tP(UGG)A MSI1P13712 422 aa13.48□□□□□ -0.25
TRN1tP(UGG)A PET18P25362 215 aa13.48□□□□□ -0.25
TRN1tP(UGG)A ARC40P38328 384 aaKnown RBP13.48□□□□□ -0.25
TRN1tP(UGG)A YND1P40009 630 aa13.48□□□□□ -0.25
TRN1tP(UGG)A YIL029CP40538 142 aa13.48□□□□□ -0.25
TRN1tP(UGG)A YKR005CQ02203 525 aa13.48□□□□□ -0.25
TRN1tP(UGG)A RFU1Q08003 200 aa13.48□□□□□ -0.25
TRN1tP(UGG)A YLR358CO13565 187 aa13.47□□□□□ -0.25
TRN1tP(UGG)A NAB2P32505 525 aaKnown RBP RIP-Chip data13.47□□□□□ -0.25not detected
TRN1tP(UGG)A UMP1P38293 148 aa13.47□□□□□ -0.25
TRN1tP(UGG)A ARO9P38840 513 aaPredicted RBP13.47□□□□□ -0.25
TRN1tP(UGG)A GPI14P47088 403 aaKnown RBP13.47□□□□□ -0.25
TRN1tP(UGG)A FMP48P53233 369 aa13.47□□□□□ -0.25
TRN1tP(UGG)A PUP1P25043 261 aa13.46□□□□□ -0.25
TRN1tP(UGG)A REC114P32841 428 aa13.46□□□□□ -0.25
TRN1tP(UGG)A SOL3P38858 249 aa13.46□□□□□ -0.25
TRN1tP(UGG)A SYS1P41544 203 aa13.46□□□□□ -0.25
TRN1tP(UGG)A BXI1P48558 297 aa13.46□□□□□ -0.25
TRN1tP(UGG)A TYW3P53177 273 aa13.46□□□□□ -0.25
TRN1tP(UGG)A LAP3Q01532 483 aaKnown RBP RIP-Chip data13.46□□□□□ -0.25not detected
TRN1tP(UGG)A SKO1Q02100 647 aa13.46□□□□□ -0.25
TRN1tP(UGG)A YPR196WQ06595 470 aa13.46□□□□□ -0.25
TRN1tP(UGG)A YBL010CP32788 280 aa13.45□□□□□ -0.26
TRN1tP(UGG)A NSA1P53136 463 aaPredicted RBP13.45□□□□□ -0.26
TRN1tP(UGG)A YGR042WP53227 271 aa13.45□□□□□ -0.26
TRN1tP(UGG)A YPR098CQ06089 161 aa13.45□□□□□ -0.26
TRN1tP(UGG)A MRX9Q07349 420 aaKnown RBP13.45□□□□□ -0.26
TRN1tP(UGG)A ODC2Q99297 307 aa13.45□□□□□ -0.26
TRN1tP(UGG)A RPS23AP0CX29 145 aaKnown RBP13.44□□□□□ -0.26
TRN1tP(UGG)A RPS23BP0CX30 145 aa13.44□□□□□ -0.26
TRN1tP(UGG)A CAP2P13517 287 aa13.44□□□□□ -0.26
TRN1tP(UGG)A SAG1P20840 650 aa13.44□□□□□ -0.26
TRN1tP(UGG)A ARO4P32449 370 aaKnown RBP13.44□□□□□ -0.26
TRN1tP(UGG)A CAT5P41735 233 aa13.44□□□□□ -0.26
TRN1tP(UGG)A YMR279CQ03263 540 aa13.44□□□□□ -0.26
TRN1tP(UGG)A DLT1Q04216 342 aa13.44□□□□□ -0.26
TRN1tP(UGG)A KEI1Q06346 221 aa13.44□□□□□ -0.26
TRN1tP(UGG)A YIL060WP40519 144 aa13.43□□□□□ -0.26
TRN1tP(UGG)A SED1Q01589 338 aa13.43□□□□□ -0.26
TRN1tP(UGG)A YDC1Q02896 317 aa13.43□□□□□ -0.26
TRN1tP(UGG)A SPR28Q04921 423 aa13.43□□□□□ -0.26
TRN1tP(UGG)A PEX10Q05568 337 aa13.43□□□□□ -0.26
TRN1tP(UGG)A GAT3Q07928 141 aa13.43□□□□□ -0.26
TRN1tP(UGG)A HUT1Q12520 339 aa13.43□□□□□ -0.26
TRN1tP(UGG)A SPC29P33419 253 aa13.42□□□□□ -0.26
TRN1tP(UGG)A FAT1P38225 669 aa13.42□□□□□ -0.26
TRN1tP(UGG)A YHR122WP38829 231 aa13.42□□□□□ -0.26
TRN1tP(UGG)A QRI1P43123 477 aaKnown RBP13.42□□□□□ -0.26
TRN1tP(UGG)A RPL6BP05739 176 aaKnown RBP13.41□□□□□ -0.26
TRN1tP(UGG)A ZUO1P32527 433 aaKnown RBP13.41□□□□□ -0.26
TRN1tP(UGG)A YER079WP40052 210 aaKnown RBP13.41□□□□□ -0.26
TRN1tP(UGG)A HNT1Q04344 158 aaKnown RBP13.41□□□□□ -0.26
TRN1tP(UGG)A ERP4Q12450 207 aa13.41□□□□□ -0.26
TRN1tP(UGG)A CYC1P00044 109 aaPredicted RBP13.4□□□□□ -0.26
TRN1tP(UGG)A YKL107WP34251 309 aa13.4□□□□□ -0.26
TRN1tP(UGG)A YKL063CP35725 167 aa13.4□□□□□ -0.26
TRN1tP(UGG)A TPN1P53099 579 aa13.4□□□□□ -0.26
TRN1tP(UGG)A LSM7P53905 115 aaKnown RBP13.4□□□□□ -0.26
TRN1tP(UGG)A BPH1P25356 2167 aa13.39□□□□□ -0.27
TRN1tP(UGG)A CDC28P00546 298 aaKnown RBP13.39□□□□□ -0.27
TRN1tP(UGG)A REP2P03872 296 aa13.39□□□□□ -0.27
TRN1tP(UGG)A CHO1P08456 276 aa13.39□□□□□ -0.27
TRN1tP(UGG)A DAL80P26343 269 aa13.39□□□□□ -0.27
TRN1tP(UGG)A HYM1P32464 399 aa13.39□□□□□ -0.27
TRN1tP(UGG)A YKL187CP34231 750 aa13.39□□□□□ -0.27
TRN1tP(UGG)A YCK3P39962 524 aa13.39□□□□□ -0.27
TRN1tP(UGG)A GAT2P40209 560 aa13.39□□□□□ -0.27
TRN1tP(UGG)A EGT2P42835 1041 aa13.39□□□□□ -0.27
TRN1tP(UGG)A OTU1P43558 301 aa13.39□□□□□ -0.27
TRN1tP(UGG)A YTH1Q06102 208 aaPredicted RBP13.39□□□□□ -0.27
TRN1tP(UGG)A GCD1P09032 578 aaPredicted RBP13.38□□□□□ -0.27
TRN1tP(UGG)A URA6P15700 204 aa13.38□□□□□ -0.27
TRN1tP(UGG)A VMA5P31412 392 aaKnown RBP13.38□□□□□ -0.27
TRN1tP(UGG)A RNP1P32385 249 aa13.38□□□□□ -0.27
TRN1tP(UGG)A ECM14P38836 430 aa13.38□□□□□ -0.27
TRN1tP(UGG)A SSN8P47821 323 aa13.38□□□□□ -0.27
TRN1tP(UGG)A UFD1P53044 361 aa13.38□□□□□ -0.27
TRN1tP(UGG)A YDR248CQ03786 193 aa13.38□□□□□ -0.27
TRN1tP(UGG)A YLR031WQ07978 186 aa13.38□□□□□ -0.27
TRN1tP(UGG)A HTZ1Q12692 134 aaKnown RBP13.38□□□□□ -0.27
TRN1tP(UGG)A GPM1P00950 247 aaKnown RBP13.37□□□□□ -0.27
TRN1tP(UGG)A CDC34P14682 295 aa13.37□□□□□ -0.27
TRN1tP(UGG)A VAM7P32912 316 aa13.37□□□□□ -0.27
TRN1tP(UGG)A MRPL36P36531 177 aa13.37□□□□□ -0.27
TRN1tP(UGG)A MID1P41821 548 aa13.37□□□□□ -0.27
TRN1tP(UGG)A TIM10P87108 93 aa13.37□□□□□ -0.27
TRN1tP(UGG)A UTP15Q04305 513 aaKnown RBP13.37□□□□□ -0.27
TRN1tP(UGG)A PIN3Q06449 215 aa13.37□□□□□ -0.27
TRN1tP(UGG)A EAF3Q12432 401 aa13.37□□□□□ -0.27
TRN1tP(UGG)A SPS4P09937 338 aa13.36□□□□□ -0.27
TRN1tP(UGG)A NAT2P37293 288 aa13.36□□□□□ -0.27
TRN1tP(UGG)A GNA1P43577 159 aaPredicted RBP13.36□□□□□ -0.27
TRN1tP(UGG)A PHO92Q06390 306 aa13.36□□□□□ -0.27
TRN1tP(UGG)A YOR186WQ08560 144 aa13.36□□□□□ -0.27
TRN1tP(UGG)A RPL25P04456 142 aaKnown RBP13.35□□□□□ -0.27
TRN1tP(UGG)A PET54P10834 293 aa13.35□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms