RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G RPL30P14120 105 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G SRP102P36057 244 aaPredicted RBP2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G ECM4P36156 370 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G FMP23P38231 175 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G GPP2P40106 250 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G ATG18P43601 500 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G TTI2P47168 421 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G PHB2P50085 310 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G YDR239CQ03780 787 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G HFD1Q04458 532 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G FSH2Q05015 223 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G ATG38Q05789 226 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G LIP2Q06005 328 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G RGC1Q06108 1083 aaKnown RBP2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G AEP3Q12089 606 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G ISA2Q12425 185 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G EAF3Q12432 401 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G APC2Q12440 853 aa2.32□□□□□ -2.04
tC(GCA)GtC(GCA)G RPC40P07703 335 aaKnown RBP2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G FUN19P28003 413 aaPredicted RBP2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G AFG1P32317 509 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G NDC1P32500 655 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G NUF2P33895 451 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G LTV1P34078 463 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G NAT2P37293 288 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G PHM8P40025 321 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G PUG1P40100 303 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G BUD8P41698 603 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G AAD14P42884 376 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G SAM37P50110 327 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G DIA3P52290 468 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G HAL1Q01766 294 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G YKR005CQ02203 525 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G YDR179W-AQ03983 463 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G RAD33Q04231 177 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G ECM18Q04623 453 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G GRC3Q07845 632 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G VAM3Q12241 283 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G YDL007C-AQ2V2Q0 85 aa2.31□□□□□ -2.04
tC(GCA)GtC(GCA)G AAC1P04710 309 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G HEM13P11353 328 aaKnown RBP2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G SNF4P12904 322 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G SNF6P18888 332 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G ATG22P25568 528 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G PHO91P27514 894 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G IDH1P28834 360 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
tC(GCA)GtC(GCA)G SWD2P36104 329 aaPredicted RBP2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G VBA2P38358 474 aaKnown RBP2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G BOL3P39724 118 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G YND1P40009 630 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G STB1P42845 420 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G LRS4Q04087 347 aaKnown RBP2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G SFM1Q12314 213 aa2.3□□□□□ -2.04
tC(GCA)GtC(GCA)G ANB1P19211 157 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G HYM1P32464 399 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G PDC2P32896 925 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G AFR1P33304 620 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G FRM2P37261 193 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G NOP16P40007 231 aaKnown RBP2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G COX15P40086 486 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G SAM50P53969 484 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G YMR244WQ04018 355 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G ATG39Q06159 398 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G STP4Q07351 490 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G RRT8Q08219 342 aa2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G RKM1Q08961 583 aaPredicted RBP2.29□□□□□ -2.04
tC(GCA)GtC(GCA)G KIN28P06242 306 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G ERG2P32352 222 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G SIP1P32578 815 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G MDM31P38880 579 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G SIM1P40472 476 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G TDA10P42938 290 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G AGX1P43567 385 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G RPL9BP51401 191 aaKnown RBP2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G YGL159WP53110 370 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G MRX8Q05473 314 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G ASR1Q06834 288 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G PBP4Q07362 185 aaKnown RBP2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G IRC23Q08416 157 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G ALG6Q12001 544 aaKnown RBP2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G YDL199CQ12407 687 aa2.28□□□□□ -2.04
tC(GCA)GtC(GCA)G RPL25P04456 142 aaKnown RBP2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G MRP20P32387 263 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G PRP21P32524 280 aaPredicted RBP2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G QDR3P38227 689 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G IMD2P38697 523 aaKnown RBP2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G IPT1P38954 527 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G MPM1P40364 252 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G IDS2P46958 469 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G MRM2P53123 320 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G HSK3P69852 69 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G NOG1Q02892 647 aaKnown RBP2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G SWA2Q06677 668 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G YPR013CQ12145 317 aa2.27□□□□□ -2.05
tC(GCA)GtC(GCA)G CDC8P00572 216 aa2.26□□□□□ -2.05
tC(GCA)GtC(GCA)G DPM1P14020 267 aaKnown RBP2.26□□□□□ -2.05
tC(GCA)GtC(GCA)G ILV6P25605 309 aaKnown RBP2.26□□□□□ -2.05
tC(GCA)GtC(GCA)G YPS1P32329 569 aa2.26□□□□□ -2.05
tC(GCA)GtC(GCA)G YKR045CP36138 183 aa2.26□□□□□ -2.05
tC(GCA)GtC(GCA)G YBR032WP38223 100 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 94.4 ms